RNA–Protein interactions for RNA: ENST00000568597.5

BLOC1S6-217, Transcript of biogenesis of lysosomal organelles complex 1 subunit 6, humanhuman

TSL 2

Gene BLOC1S6, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S6-217ENST00000568597 NISCHQ9Y2I1 1504 aa49.28■■■■■ 5.48
BLOC1S6-217ENST00000568597 CCDC180Q9P1Z9 1646 aa43.89■■■■■ 4.62
BLOC1S6-217ENST00000568597 ABCC9O60706 1549 aa43.16■■■■■ 4.5
BLOC1S6-217ENST00000568597 RB1CC1Q8TDY2 1594 aa41.46■■■■■ 4.23
BLOC1S6-217ENST00000568597 DCAF8L2P0C7V8 631 aa41.41■■■■■ 4.22
BLOC1S6-217ENST00000568597 NACADO15069 1562 aa41.36■■■■■ 4.21
BLOC1S6-217ENST00000568597 MYO15BQ96JP2 1530 aa41.03■■■■■ 4.16
BLOC1S6-217ENST00000568597 ZCCHC6Q5VYS8 1495 aaKnown RBP41■■■■■ 4.15
BLOC1S6-217ENST00000568597 DCAF1Q9Y4B6 1507 aa40.77■■■■■ 4.12
BLOC1S6-217ENST00000568597 UNC13AQ9UPW8 1703 aa40.34■■■■■ 4.05
BLOC1S6-217ENST00000568597 PABPN1Q86U42 306 aaKnown RBP eCLIP40.31■■■■■ 4.04
BLOC1S6-217ENST00000568597 BICRAQ9NZM4 1560 aa40.08■■■■■ 4.01
BLOC1S6-217ENST00000568597 SCRIBQ14160 1630 aa40.04■■■■■ 4
BLOC1S6-217ENST00000568597 SHROOM4Q9ULL8 1493 aa39.8■■■■□ 3.96
BLOC1S6-217ENST00000568597 DNAJC5BQ9UF47 199 aa39.69■■■■□ 3.94
BLOC1S6-217ENST00000568597 EIF4G1Q04637 1599 aaKnown RBP39.12■■■■□ 3.85
BLOC1S6-217ENST00000568597 CC2D2AQ9P2K1 1620 aa39■■■■□ 3.83
BLOC1S6-217ENST00000568597 CECR2Q9BXF3 1484 aa38.82■■■■□ 3.81
BLOC1S6-217ENST00000568597 SMARCA4P51532 1647 aa38.27■■■■□ 3.72
BLOC1S6-217ENST00000568597 BAZ1AQ9NRL2 1556 aaPredicted RBP38.26■■■■□ 3.72
BLOC1S6-217ENST00000568597 NCAPD3P42695 1498 aa38.15■■■■□ 3.7
BLOC1S6-217ENST00000568597 ATAD2BQ9ULI0 1458 aa38.13■■■■□ 3.69
BLOC1S6-217ENST00000568597 SMARCA2P51531 1590 aa38.13■■■■□ 3.69
BLOC1S6-217ENST00000568597 MROH2BQ7Z745 1585 aa37.94■■■■□ 3.66
BLOC1S6-217ENST00000568597 HMGXB3Q12766 1538 aa37.94■■■■□ 3.66
BLOC1S6-217ENST00000568597 PEG3Q9GZU2 1588 aa37.89■■■■□ 3.66
BLOC1S6-217ENST00000568597 BAZ1BQ9UIG0 1483 aaKnown RBP37.86■■■■□ 3.65
BLOC1S6-217ENST00000568597 WIZO95785 1651 aa37.51■■■■□ 3.6
BLOC1S6-217ENST00000568597 RSF1Q96T23 1441 aaPredicted RBP37.47■■■■□ 3.59
BLOC1S6-217ENST00000568597 ERCC6Q03468 1493 aa37.31■■■■□ 3.56
BLOC1S6-217ENST00000568597 NESP48681 1621 aa37.24■■■■□ 3.55
BLOC1S6-217ENST00000568597 LAMC3Q9Y6N6 1575 aa37.19■■■■□ 3.54
BLOC1S6-217ENST00000568597 TOP2AP11388 1531 aaKnown RBP37.15■■■■□ 3.54
BLOC1S6-217ENST00000568597 CADPSQ9ULU8 1353 aa37.06■■■■□ 3.52
BLOC1S6-217ENST00000568597 PDS5BQ9NTI5 1447 aa37.02■■■■□ 3.52
BLOC1S6-217ENST00000568597 CUX2O14529 1486 aa36.93■■■■□ 3.5
BLOC1S6-217ENST00000568597 KIF21AQ7Z4S6 1674 aa36.77■■■■□ 3.48
BLOC1S6-217ENST00000568597 CFTRP13569 1480 aa36.77■■■■□ 3.48
BLOC1S6-217ENST00000568597 CCDC88BA6NC98 1476 aa36.71■■■■□ 3.47
BLOC1S6-217ENST00000568597 THOC2Q8NI27 1593 aaKnown RBP36.7■■■■□ 3.47
BLOC1S6-217ENST00000568597 FANCD2Q9BXW9 1451 aa36.62■■■■□ 3.45
BLOC1S6-217ENST00000568597 CEP164Q9UPV0 1460 aa36.62■■■■□ 3.45
BLOC1S6-217ENST00000568597 MRC2Q9UBG0 1479 aa36.59■■■■□ 3.45
BLOC1S6-217ENST00000568597 SUPT5HO00267 1087 aaKnown RBP36.49■■■■□ 3.43
BLOC1S6-217ENST00000568597 WDR62O43379 1518 aa36.43■■■■□ 3.42
BLOC1S6-217ENST00000568597 PRDM2Q13029 1718 aa36.41■■■■□ 3.42
BLOC1S6-217ENST00000568597 URB2Q14146 1524 aaKnown RBP36.21■■■■□ 3.39
BLOC1S6-217ENST00000568597 ABCC8Q09428 1581 aa36.06■■■■□ 3.36
BLOC1S6-217ENST00000568597 DNAJC5Q9H3Z4 198 aa36.01■■■■□ 3.36
BLOC1S6-217ENST00000568597 TOPBP1Q92547 1522 aa35.98■■■■□ 3.35
BLOC1S6-217ENST00000568597 DNMBPQ6XZF7 1577 aa35.94■■■■□ 3.34
BLOC1S6-217ENST00000568597 IFT140Q96RY7 1462 aa35.86■■■■□ 3.33
BLOC1S6-217ENST00000568597 POLA1P09884 1462 aaPredicted RBP35.67■■■■□ 3.3
BLOC1S6-217ENST00000568597 ZNF608Q9ULD9 1512 aaPredicted RBP35.63■■■■□ 3.29
BLOC1S6-217ENST00000568597 CUX1P39880 1505 aa35.62■■■■□ 3.29
BLOC1S6-217ENST00000568597 SOGA1O94964 1423 aa35.57■■■■□ 3.29
BLOC1S6-217ENST00000568597 FGD5Q6ZNL6 1462 aa35.57■■■■□ 3.28
BLOC1S6-217ENST00000568597 TARBP1Q13395 1621 aaKnown RBP35.56■■■■□ 3.28
BLOC1S6-217ENST00000568597 RAD54L2Q9Y4B4 1467 aa35.5■■■■□ 3.27
BLOC1S6-217ENST00000568597 EIF4G3O43432 1585 aaKnown RBP35.5■■■■□ 3.27
BLOC1S6-217ENST00000568597 AQRO60306 1485 aaKnown RBP eCLIP35.45■■■■□ 3.272e-6■■■□□ 18.3
BLOC1S6-217ENST00000568597 OSCARQ8IYS5 282 aa35.43■■■■□ 3.26
BLOC1S6-217ENST00000568597 WRNQ14191 1432 aaPredicted RBP eCLIP35.4■■■■□ 3.26
BLOC1S6-217ENST00000568597 TDRD9Q8NDG6 1382 aaKnown RBP35.38■■■■□ 3.25
BLOC1S6-217ENST00000568597 WDR97A6NE52 1622 aa35.35■■■■□ 3.25
BLOC1S6-217ENST00000568597 TOP2BQ02880 1626 aa35.28■■■■□ 3.24
BLOC1S6-217ENST00000568597 BIVM-ERCC5R4GMW8 1640 aa35.25■■■■□ 3.23
BLOC1S6-217ENST00000568597 SYNJ1O43426 1573 aa35.22■■■■□ 3.23
BLOC1S6-217ENST00000568597 ABCA10Q8WWZ4 1543 aa35.22■■■■□ 3.23
BLOC1S6-217ENST00000568597 FBLN2P98095 1184 aa35.19■■■■□ 3.22
BLOC1S6-217ENST00000568597 GRIN2BQ13224 1484 aa35.18■■■■□ 3.22
BLOC1S6-217ENST00000568597 GAPVD1Q14C86 1478 aa35.16■■■■□ 3.22
BLOC1S6-217ENST00000568597 SNAPC4Q5SXM2 1469 aa35.13■■■■□ 3.21
BLOC1S6-217ENST00000568597 MAGI1Q96QZ7 1491 aaPredicted RBP35.1■■■■□ 3.21
BLOC1S6-217ENST00000568597 CHMP7Q8WUX9 453 aaPredicted RBP35.06■■■■□ 3.2
BLOC1S6-217ENST00000568597 CHD1O14646 1710 aa35.06■■■■□ 3.2
BLOC1S6-217ENST00000568597 ABCA5Q8WWZ7 1642 aa35.04■■■■□ 3.2
BLOC1S6-217ENST00000568597 PBRM1Q86U86 1689 aa35.01■■■■□ 3.19
BLOC1S6-217ENST00000568597 SYNJ2O15056 1496 aa34.97■■■■□ 3.19
BLOC1S6-217ENST00000568597 ERICH3Q5RHP9 1530 aa34.81■■■■□ 3.16
BLOC1S6-217ENST00000568597 TRIM41Q8WV44 630 aa34.81■■■■□ 3.16
BLOC1S6-217ENST00000568597 ARHGEF11O15085 1522 aa34.76■■■■□ 3.15
BLOC1S6-217ENST00000568597 FHAD1B1AJZ9 1412 aa34.75■■■■□ 3.15
BLOC1S6-217ENST00000568597 RIMBP3CA6NJZ7 1639 aa34.75■■■■□ 3.15
BLOC1S6-217ENST00000568597 RIMBP3BA6NNM3 1639 aa34.75■■■■□ 3.15
BLOC1S6-217ENST00000568597 RIMBP3Q9UFD9 1639 aa34.75■■■■□ 3.15
BLOC1S6-217ENST00000568597 ADAMTS12P58397 1594 aa34.74■■■■□ 3.15
BLOC1S6-217ENST00000568597 KIF27Q86VH2 1401 aa34.71■■■■□ 3.15
BLOC1S6-217ENST00000568597 GRIN2AQ12879 1464 aa34.7■■■■□ 3.15
BLOC1S6-217ENST00000568597 CLASP1Q7Z460 1538 aa34.69■■■■□ 3.14
BLOC1S6-217ENST00000568597 NUP160Q12769 1436 aa34.54■■■■□ 3.12
BLOC1S6-217ENST00000568597 IGF1RP08069 1367 aa34.52■■■■□ 3.12
BLOC1S6-217ENST00000568597 CYB5RLQ6IPT4 315 aa34.52■■■■□ 3.12
BLOC1S6-217ENST00000568597 CEP170Q5SW79 1584 aa34.48■■■■□ 3.11
BLOC1S6-217ENST00000568597 CUL7Q14999 1698 aa34.46■■■■□ 3.11
BLOC1S6-217ENST00000568597 ARAP1Q96P48 1450 aa34.44■■■■□ 3.1
BLOC1S6-217ENST00000568597 CARMIL1Q5VZK9 1371 aa34.36■■■■□ 3.09
BLOC1S6-217ENST00000568597 JPH4Q96JJ6 628 aa34.25■■■■□ 3.07
BLOC1S6-217ENST00000568597 SHROOM2Q13796 1616 aa34.25■■■■□ 3.07
BLOC1S6-217ENST00000568597 RUSC2Q8N2Y8 1516 aa34.23■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms