RNA–Protein interactions for RNA: ENST00000568594.5

GRAMD2A-211, Transcript of GRAM domain containing 2A, humanhuman

APPRIS ALT2 TSL 4

Gene GRAMD2A, Length 623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2A-211ENST00000568594 NISCHQ9Y2I1 1504 aa28.46■■■□□ 2.15
GRAMD2A-211ENST00000568594 ABCC9O60706 1549 aa27.08■■□□□ 1.93
GRAMD2A-211ENST00000568594 DNAJC5BQ9UF47 199 aa26.37■■□□□ 1.81
GRAMD2A-211ENST00000568594 CCDC180Q9P1Z9 1646 aa25.99■■□□□ 1.75
GRAMD2A-211ENST00000568594 RB1CC1Q8TDY2 1594 aa25.24■■□□□ 1.63
GRAMD2A-211ENST00000568594 PABPN1Q86U42 306 aaKnown RBP eCLIP25.05■■□□□ 1.6
GRAMD2A-211ENST00000568594 DNAJC5Q9H3Z4 198 aa24.9■■□□□ 1.58
GRAMD2A-211ENST00000568594 NACADO15069 1562 aa24.79■■□□□ 1.56
GRAMD2A-211ENST00000568594 UNC13AQ9UPW8 1703 aa24.78■■□□□ 1.56
GRAMD2A-211ENST00000568594 BICRAQ9NZM4 1560 aa24.62■■□□□ 1.53
GRAMD2A-211ENST00000568594 DCAF8L2P0C7V8 631 aa24.48■■□□□ 1.51
GRAMD2A-211ENST00000568594 CECR2Q9BXF3 1484 aa24.48■■□□□ 1.51
GRAMD2A-211ENST00000568594 CC2D2AQ9P2K1 1620 aa24.4■■□□□ 1.5
GRAMD2A-211ENST00000568594 EIF4G1Q04637 1599 aaKnown RBP24.08■■□□□ 1.44
GRAMD2A-211ENST00000568594 MYO15BQ96JP2 1530 aa24.06■■□□□ 1.44
GRAMD2A-211ENST00000568594 SHROOM4Q9ULL8 1493 aa24.04■■□□□ 1.44
GRAMD2A-211ENST00000568594 CUX2O14529 1486 aa23.7■■□□□ 1.38
GRAMD2A-211ENST00000568594 SCRIBQ14160 1630 aa23.7■■□□□ 1.38
GRAMD2A-211ENST00000568594 TRIM41Q8WV44 630 aa23.43■■□□□ 1.34
GRAMD2A-211ENST00000568594 ERCC6Q03468 1493 aa23.42■■□□□ 1.34
GRAMD2A-211ENST00000568594 DCAF1Q9Y4B6 1507 aa23.38■■□□□ 1.33
GRAMD2A-211ENST00000568594 ZCCHC6Q5VYS8 1495 aaKnown RBP23.36■■□□□ 1.33
GRAMD2A-211ENST00000568594 NESP48681 1621 aa22.99■■□□□ 1.27
GRAMD2A-211ENST00000568594 THOC2Q8NI27 1593 aaKnown RBP22.95■■□□□ 1.26
GRAMD2A-211ENST00000568594 NCAPD3P42695 1498 aa22.9■■□□□ 1.26
GRAMD2A-211ENST00000568594 SMARCA2P51531 1590 aa22.75■■□□□ 1.23
GRAMD2A-211ENST00000568594 ATAD2BQ9ULI0 1458 aa22.73■■□□□ 1.23
GRAMD2A-211ENST00000568594 KIF21AQ7Z4S6 1674 aa22.66■■□□□ 1.22
GRAMD2A-211ENST00000568594 HMGXB3Q12766 1538 aa22.66■■□□□ 1.22
GRAMD2A-211ENST00000568594 LAMC3Q9Y6N6 1575 aa22.56■■□□□ 1.2
GRAMD2A-211ENST00000568594 BAZ1AQ9NRL2 1556 aaPredicted RBP22.55■■□□□ 1.2
GRAMD2A-211ENST00000568594 SMARCA4P51532 1647 aa22.46■■□□□ 1.19
GRAMD2A-211ENST00000568594 PDS5BQ9NTI5 1447 aa22.45■■□□□ 1.18
GRAMD2A-211ENST00000568594 BAZ1BQ9UIG0 1483 aaKnown RBP22.44■■□□□ 1.18
GRAMD2A-211ENST00000568594 OSCARQ8IYS5 282 aa22.42■■□□□ 1.18
GRAMD2A-211ENST00000568594 MRC2Q9UBG0 1479 aa22.36■■□□□ 1.17
GRAMD2A-211ENST00000568594 WDR62O43379 1518 aa22.36■■□□□ 1.17
GRAMD2A-211ENST00000568594 RIMBP3CA6NJZ7 1639 aa22.35■■□□□ 1.17
GRAMD2A-211ENST00000568594 RIMBP3BA6NNM3 1639 aa22.35■■□□□ 1.17
GRAMD2A-211ENST00000568594 RIMBP3Q9UFD9 1639 aa22.35■■□□□ 1.17
GRAMD2A-211ENST00000568594 AEBP2Q6ZN18 517 aaPredicted RBP22.22■■□□□ 1.15
GRAMD2A-211ENST00000568594 PEG3Q9GZU2 1588 aa22.2■■□□□ 1.14
GRAMD2A-211ENST00000568594 CADPSQ9ULU8 1353 aa22.16■■□□□ 1.14
GRAMD2A-211ENST00000568594 ARHGEF11O15085 1522 aa22.14■■□□□ 1.13
GRAMD2A-211ENST00000568594 TRHP20396 242 aaPredicted RBP22.11■■□□□ 1.13
GRAMD2A-211ENST00000568594 CEP164Q9UPV0 1460 aa22.05■■□□□ 1.12
GRAMD2A-211ENST00000568594 CYB5RLQ6IPT4 315 aa22.02■■□□□ 1.12
GRAMD2A-211ENST00000568594 MROH2BQ7Z745 1585 aa21.96■■□□□ 1.11
GRAMD2A-211ENST00000568594 FANCD2Q9BXW9 1451 aa21.95■■□□□ 1.1
GRAMD2A-211ENST00000568594 ARAP1Q96P48 1450 aa21.87■■□□□ 1.09
GRAMD2A-211ENST00000568594 URB2Q14146 1524 aaKnown RBP21.86■■□□□ 1.09
GRAMD2A-211ENST00000568594 ZNF608Q9ULD9 1512 aaPredicted RBP21.79■■□□□ 1.08
GRAMD2A-211ENST00000568594 CFTRP13569 1480 aa21.7■■□□□ 1.06
GRAMD2A-211ENST00000568594 CHD1O14646 1710 aa21.67■■□□□ 1.06
GRAMD2A-211ENST00000568594 WIZO95785 1651 aa21.67■■□□□ 1.06
GRAMD2A-211ENST00000568594 IFT140Q96RY7 1462 aa21.64■■□□□ 1.05
GRAMD2A-211ENST00000568594 EIF4G3O43432 1585 aaKnown RBP21.61■■□□□ 1.05
GRAMD2A-211ENST00000568594 RSF1Q96T23 1441 aaPredicted RBP21.6■■□□□ 1.05
GRAMD2A-211ENST00000568594 ILDR1Q86SU0 546 aaPredicted RBP21.5■■□□□ 1.03
GRAMD2A-211ENST00000568594 FBLN2P98095 1184 aa21.48■■□□□ 1.03
GRAMD2A-211ENST00000568594 PRDM2Q13029 1718 aa21.44■■□□□ 1.02
GRAMD2A-211ENST00000568594 AQRO60306 1485 aaKnown RBP eCLIP21.44■■□□□ 1.02
GRAMD2A-211ENST00000568594 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
GRAMD2A-211ENST00000568594 CLASP1Q7Z460 1538 aa21.35■■□□□ 1.01
GRAMD2A-211ENST00000568594 TARBP1Q13395 1621 aaKnown RBP21.33■■□□□ 1
GRAMD2A-211ENST00000568594 TOP2AP11388 1531 aaKnown RBP21.26■□□□□ 0.99
GRAMD2A-211ENST00000568594 DNMBPQ6XZF7 1577 aa21.24■□□□□ 0.99
GRAMD2A-211ENST00000568594 SYNJ1O43426 1573 aa21.21■□□□□ 0.99
GRAMD2A-211ENST00000568594 ABCC8Q09428 1581 aa21.2■□□□□ 0.98
GRAMD2A-211ENST00000568594 GAPVD1Q14C86 1478 aa21.2■□□□□ 0.98
GRAMD2A-211ENST00000568594 SNAPC4Q5SXM2 1469 aa21.19■□□□□ 0.98
GRAMD2A-211ENST00000568594 POLA1P09884 1462 aaPredicted RBP21.14■□□□□ 0.98
GRAMD2A-211ENST00000568594 TDRD9Q8NDG6 1382 aaKnown RBP21.12■□□□□ 0.97
GRAMD2A-211ENST00000568594 RAD54L2Q9Y4B4 1467 aa21.12■□□□□ 0.97
GRAMD2A-211ENST00000568594 CHMP7Q8WUX9 453 aaPredicted RBP21.11■□□□□ 0.97
GRAMD2A-211ENST00000568594 KIF13AQ9H1H9 1805 aa21.07■□□□□ 0.96
GRAMD2A-211ENST00000568594 KDM4FA0A1W2PPD8 638 aa21.05■□□□□ 0.96
GRAMD2A-211ENST00000568594 CCDC88BA6NC98 1476 aa21.05■□□□□ 0.96
GRAMD2A-211ENST00000568594 MAGI1Q96QZ7 1491 aaPredicted RBP21.02■□□□□ 0.96
GRAMD2A-211ENST00000568594 ERCC6L2Q5T890 1561 aa21.01■□□□□ 0.95
GRAMD2A-211ENST00000568594 SYNJ2O15056 1496 aa20.99■□□□□ 0.95
GRAMD2A-211ENST00000568594 SOGA1O94964 1423 aa20.98■□□□□ 0.95
GRAMD2A-211ENST00000568594 WDR97A6NE52 1622 aa20.95■□□□□ 0.94
GRAMD2A-211ENST00000568594 GRIN2BQ13224 1484 aa20.93■□□□□ 0.94
GRAMD2A-211ENST00000568594 FGD5Q6ZNL6 1462 aa20.86■□□□□ 0.93
GRAMD2A-211ENST00000568594 PBRM1Q86U86 1689 aa20.84■□□□□ 0.93
GRAMD2A-211ENST00000568594 CEP170Q5SW79 1584 aa20.81■□□□□ 0.92
GRAMD2A-211ENST00000568594 KDM6BO15054 1643 aa20.78■□□□□ 0.92
GRAMD2A-211ENST00000568594 FAM69CQ0P6D2 419 aa20.77■□□□□ 0.92
GRAMD2A-211ENST00000568594 ABCC10Q5T3U5 1492 aa20.74■□□□□ 0.91
GRAMD2A-211ENST00000568594 HECW2Q9P2P5 1572 aa20.72■□□□□ 0.91
GRAMD2A-211ENST00000568594 SHROOM2Q13796 1616 aa20.7■□□□□ 0.9
GRAMD2A-211ENST00000568594 CUX1P39880 1505 aa20.69■□□□□ 0.9
GRAMD2A-211ENST00000568594 DIP2BQ9P265 1576 aa20.69■□□□□ 0.9
GRAMD2A-211ENST00000568594 GRIN2AQ12879 1464 aa20.68■□□□□ 0.9
GRAMD2A-211ENST00000568594 TSPOAP1O95153 1857 aa20.66■□□□□ 0.9
GRAMD2A-211ENST00000568594 NUP160Q12769 1436 aa20.64■□□□□ 0.89
GRAMD2A-211ENST00000568594 ABCA5Q8WWZ7 1642 aa20.64■□□□□ 0.89
GRAMD2A-211ENST00000568594 ADGRL1O94910 1474 aa20.63■□□□□ 0.89
GRAMD2A-211ENST00000568594 MAPKBP1O60336 1514 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms