RNA–Protein interactions for RNA: ENST00000568583.5

TRAPPC2L-214, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 3 BASIC

Gene TRAPPC2L, Length 801 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-214ENST00000568583 NISCHQ9Y2I1 1504 aa28.66■■■□□ 2.18
TRAPPC2L-214ENST00000568583 CCDC180Q9P1Z9 1646 aa25.65■■□□□ 1.7
TRAPPC2L-214ENST00000568583 ABCC9O60706 1549 aa25.64■■□□□ 1.7
TRAPPC2L-214ENST00000568583 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
TRAPPC2L-214ENST00000568583 DCAF8L2P0C7V8 631 aa24.29■■□□□ 1.48
TRAPPC2L-214ENST00000568583 NACADO15069 1562 aa24.21■■□□□ 1.47
TRAPPC2L-214ENST00000568583 DNAJC5BQ9UF47 199 aa24.04■■□□□ 1.44
TRAPPC2L-214ENST00000568583 UNC13AQ9UPW8 1703 aa24■■□□□ 1.43
TRAPPC2L-214ENST00000568583 PABPN1Q86U42 306 aaKnown RBP eCLIP23.93■■□□□ 1.42
TRAPPC2L-214ENST00000568583 MYO15BQ96JP2 1530 aa23.84■■□□□ 1.41
TRAPPC2L-214ENST00000568583 ZCCHC6Q5VYS8 1495 aaKnown RBP23.74■■□□□ 1.39
TRAPPC2L-214ENST00000568583 BICRAQ9NZM4 1560 aa23.73■■□□□ 1.39
TRAPPC2L-214ENST00000568583 DCAF1Q9Y4B6 1507 aa23.6■■□□□ 1.37
TRAPPC2L-214ENST00000568583 SCRIBQ14160 1630 aa23.46■■□□□ 1.35
TRAPPC2L-214ENST00000568583 SHROOM4Q9ULL8 1493 aa23.21■■□□□ 1.31
TRAPPC2L-214ENST00000568583 CC2D2AQ9P2K1 1620 aa23.16■■□□□ 1.3
TRAPPC2L-214ENST00000568583 EIF4G1Q04637 1599 aaKnown RBP23.1■■□□□ 1.29
TRAPPC2L-214ENST00000568583 CECR2Q9BXF3 1484 aa23.03■■□□□ 1.28
TRAPPC2L-214ENST00000568583 SMARCA4P51532 1647 aa22.35■■□□□ 1.17
TRAPPC2L-214ENST00000568583 NCAPD3P42695 1498 aa22.35■■□□□ 1.17
TRAPPC2L-214ENST00000568583 ATAD2BQ9ULI0 1458 aa22.33■■□□□ 1.16
TRAPPC2L-214ENST00000568583 SMARCA2P51531 1590 aa22.23■■□□□ 1.15
TRAPPC2L-214ENST00000568583 BAZ1AQ9NRL2 1556 aaPredicted RBP22.21■■□□□ 1.15
TRAPPC2L-214ENST00000568583 HMGXB3Q12766 1538 aa22.17■■□□□ 1.14
TRAPPC2L-214ENST00000568583 MROH2BQ7Z745 1585 aa22.13■■□□□ 1.13
TRAPPC2L-214ENST00000568583 BAZ1BQ9UIG0 1483 aaKnown RBP22.1■■□□□ 1.13
TRAPPC2L-214ENST00000568583 NESP48681 1621 aa22.09■■□□□ 1.13
TRAPPC2L-214ENST00000568583 PEG3Q9GZU2 1588 aa22.08■■□□□ 1.12
TRAPPC2L-214ENST00000568583 ERCC6Q03468 1493 aa22.07■■□□□ 1.12
TRAPPC2L-214ENST00000568583 CUX2O14529 1486 aa21.94■■□□□ 1.1
TRAPPC2L-214ENST00000568583 WIZO95785 1651 aa21.94■■□□□ 1.1
TRAPPC2L-214ENST00000568583 DNAJC5Q9H3Z4 198 aa21.91■■□□□ 1.1
TRAPPC2L-214ENST00000568583 LAMC3Q9Y6N6 1575 aa21.85■■□□□ 1.09
TRAPPC2L-214ENST00000568583 KIF21AQ7Z4S6 1674 aa21.82■■□□□ 1.08
TRAPPC2L-214ENST00000568583 THOC2Q8NI27 1593 aaKnown RBP21.78■■□□□ 1.08
TRAPPC2L-214ENST00000568583 PDS5BQ9NTI5 1447 aa21.7■■□□□ 1.06
TRAPPC2L-214ENST00000568583 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
TRAPPC2L-214ENST00000568583 RSF1Q96T23 1441 aaPredicted RBP21.68■■□□□ 1.06
TRAPPC2L-214ENST00000568583 TOP2AP11388 1531 aaKnown RBP21.54■■□□□ 1.04
TRAPPC2L-214ENST00000568583 MRC2Q9UBG0 1479 aa21.51■■□□□ 1.03
TRAPPC2L-214ENST00000568583 FANCD2Q9BXW9 1451 aa21.46■■□□□ 1.03
TRAPPC2L-214ENST00000568583 CEP164Q9UPV0 1460 aa21.46■■□□□ 1.03
TRAPPC2L-214ENST00000568583 WDR62O43379 1518 aa21.46■■□□□ 1.03
TRAPPC2L-214ENST00000568583 CFTRP13569 1480 aa21.45■■□□□ 1.03
TRAPPC2L-214ENST00000568583 CCDC88BA6NC98 1476 aa21.35■■□□□ 1.01
TRAPPC2L-214ENST00000568583 PRDM2Q13029 1718 aa21.35■■□□□ 1.01
TRAPPC2L-214ENST00000568583 URB2Q14146 1524 aaKnown RBP21.31■■□□□ 1
TRAPPC2L-214ENST00000568583 TOPBP1Q92547 1522 aa21.08■□□□□ 0.96
TRAPPC2L-214ENST00000568583 TRIM41Q8WV44 630 aa21.06■□□□□ 0.96
TRAPPC2L-214ENST00000568583 ZNF608Q9ULD9 1512 aaPredicted RBP21.05■□□□□ 0.96
TRAPPC2L-214ENST00000568583 OSCARQ8IYS5 282 aa21.03■□□□□ 0.96
TRAPPC2L-214ENST00000568583 IFT140Q96RY7 1462 aa21■□□□□ 0.95
TRAPPC2L-214ENST00000568583 DNMBPQ6XZF7 1577 aa20.98■□□□□ 0.95
TRAPPC2L-214ENST00000568583 ABCC8Q09428 1581 aa20.97■□□□□ 0.95
TRAPPC2L-214ENST00000568583 EIF4G3O43432 1585 aaKnown RBP20.91■□□□□ 0.94
TRAPPC2L-214ENST00000568583 TARBP1Q13395 1621 aaKnown RBP20.91■□□□□ 0.94
TRAPPC2L-214ENST00000568583 SUPT5HO00267 1087 aaKnown RBP20.9■□□□□ 0.94
TRAPPC2L-214ENST00000568583 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.937e-7■■■□□ 15.5
TRAPPC2L-214ENST00000568583 POLA1P09884 1462 aaPredicted RBP20.87■□□□□ 0.93
TRAPPC2L-214ENST00000568583 RAD54L2Q9Y4B4 1467 aa20.84■□□□□ 0.93
TRAPPC2L-214ENST00000568583 CHD1O14646 1710 aa20.81■□□□□ 0.92
TRAPPC2L-214ENST00000568583 SOGA1O94964 1423 aa20.79■□□□□ 0.92
TRAPPC2L-214ENST00000568583 RIMBP3CA6NJZ7 1639 aa20.79■□□□□ 0.92
TRAPPC2L-214ENST00000568583 RIMBP3BA6NNM3 1639 aa20.79■□□□□ 0.92
TRAPPC2L-214ENST00000568583 RIMBP3Q9UFD9 1639 aa20.79■□□□□ 0.92
TRAPPC2L-214ENST00000568583 CUX1P39880 1505 aa20.78■□□□□ 0.92
TRAPPC2L-214ENST00000568583 FGD5Q6ZNL6 1462 aa20.76■□□□□ 0.91
TRAPPC2L-214ENST00000568583 TDRD9Q8NDG6 1382 aaKnown RBP20.76■□□□□ 0.91
TRAPPC2L-214ENST00000568583 FBLN2P98095 1184 aa20.74■□□□□ 0.91
TRAPPC2L-214ENST00000568583 ARHGEF11O15085 1522 aa20.68■□□□□ 0.9
TRAPPC2L-214ENST00000568583 WDR97A6NE52 1622 aa20.63■□□□□ 0.89
TRAPPC2L-214ENST00000568583 SNAPC4Q5SXM2 1469 aa20.62■□□□□ 0.89
TRAPPC2L-214ENST00000568583 CYB5RLQ6IPT4 315 aa20.6■□□□□ 0.89
TRAPPC2L-214ENST00000568583 PBRM1Q86U86 1689 aa20.58■□□□□ 0.88
TRAPPC2L-214ENST00000568583 CHMP7Q8WUX9 453 aaPredicted RBP20.55■□□□□ 0.88
TRAPPC2L-214ENST00000568583 GRIN2BQ13224 1484 aa20.55■□□□□ 0.88
TRAPPC2L-214ENST00000568583 GAPVD1Q14C86 1478 aa20.52■□□□□ 0.88
TRAPPC2L-214ENST00000568583 MAGI1Q96QZ7 1491 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC2L-214ENST00000568583 ARAP1Q96P48 1450 aa20.5■□□□□ 0.87
TRAPPC2L-214ENST00000568583 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
TRAPPC2L-214ENST00000568583 ABCA5Q8WWZ7 1642 aa20.48■□□□□ 0.87
TRAPPC2L-214ENST00000568583 CLASP1Q7Z460 1538 aa20.48■□□□□ 0.87
TRAPPC2L-214ENST00000568583 SYNJ2O15056 1496 aa20.47■□□□□ 0.87
TRAPPC2L-214ENST00000568583 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
TRAPPC2L-214ENST00000568583 BIVM-ERCC5R4GMW8 1640 aa20.46■□□□□ 0.87
TRAPPC2L-214ENST00000568583 TOP2BQ02880 1626 aa20.45■□□□□ 0.86
TRAPPC2L-214ENST00000568583 WRNQ14191 1432 aaPredicted RBP eCLIP20.43■□□□□ 0.86
TRAPPC2L-214ENST00000568583 TRHP20396 242 aaPredicted RBP20.33■□□□□ 0.85
TRAPPC2L-214ENST00000568583 GRIN2AQ12879 1464 aa20.3■□□□□ 0.84
TRAPPC2L-214ENST00000568583 ADAMTS12P58397 1594 aa20.3■□□□□ 0.84
TRAPPC2L-214ENST00000568583 CEP170Q5SW79 1584 aa20.27■□□□□ 0.84
TRAPPC2L-214ENST00000568583 ERCC6L2Q5T890 1561 aa20.26■□□□□ 0.83
TRAPPC2L-214ENST00000568583 ERICH3Q5RHP9 1530 aa20.23■□□□□ 0.83
TRAPPC2L-214ENST00000568583 FHAD1B1AJZ9 1412 aa20.23■□□□□ 0.83
TRAPPC2L-214ENST00000568583 NUP160Q12769 1436 aa20.2■□□□□ 0.82
TRAPPC2L-214ENST00000568583 SHROOM2Q13796 1616 aa20.15■□□□□ 0.82
TRAPPC2L-214ENST00000568583 JPH4Q96JJ6 628 aa20.08■□□□□ 0.81
TRAPPC2L-214ENST00000568583 PRG4Q92954 1404 aaPredicted RBP20.05■□□□□ 0.8
TRAPPC2L-214ENST00000568583 IGF1RP08069 1367 aa20.05■□□□□ 0.8
TRAPPC2L-214ENST00000568583 RUSC2Q8N2Y8 1516 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms