RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 NISCHQ9Y2I1 1504 aa18.18■□□□□ 0.5
SCAPER-221ENST00000568549 CCDC180Q9P1Z9 1646 aa16.11■□□□□ 0.17
SCAPER-221ENST00000568549 AEBP2Q6ZN18 517 aaPredicted RBP15.98■□□□□ 0.15
SCAPER-221ENST00000568549 ABCC9O60706 1549 aa15.44■□□□□ 0.06
SCAPER-221ENST00000568549 ZCCHC6Q5VYS8 1495 aaKnown RBP15.21■□□□□ 0.03
SCAPER-221ENST00000568549 DCAF1Q9Y4B6 1507 aa15.06■□□□□ 0
SCAPER-221ENST00000568549 DCAF8L2P0C7V8 631 aa15.05■□□□□ -0
SCAPER-221ENST00000568549 NACADO15069 1562 aa15.04■□□□□ -0
SCAPER-221ENST00000568549 MYO15BQ96JP2 1530 aa15.02□□□□□ -0.01
SCAPER-221ENST00000568549 RB1CC1Q8TDY2 1594 aa15□□□□□ -0.01
SCAPER-221ENST00000568549 CHIC1Q5VXU3 224 aa14.99□□□□□ -0.01
SCAPER-221ENST00000568549 UNC13AQ9UPW8 1703 aa14.73□□□□□ -0.05
SCAPER-221ENST00000568549 SCRIBQ14160 1630 aa14.7□□□□□ -0.06
SCAPER-221ENST00000568549 BICRAQ9NZM4 1560 aa14.52□□□□□ -0.08
SCAPER-221ENST00000568549 SHROOM4Q9ULL8 1493 aa14.52□□□□□ -0.08
SCAPER-221ENST00000568549 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
SCAPER-221ENST00000568549 EIF4G1Q04637 1599 aaKnown RBP14.13□□□□□ -0.15
SCAPER-221ENST00000568549 CECR2Q9BXF3 1484 aa14.12□□□□□ -0.15
SCAPER-221ENST00000568549 BAZ1AQ9NRL2 1556 aaPredicted RBP14.09□□□□□ -0.15
SCAPER-221ENST00000568549 SMARCA4P51532 1647 aa14.08□□□□□ -0.15
SCAPER-221ENST00000568549 MROH2BQ7Z745 1585 aa14.02□□□□□ -0.16
SCAPER-221ENST00000568549 CC2D2AQ9P2K1 1620 aa14.01□□□□□ -0.17
SCAPER-221ENST00000568549 RSF1Q96T23 1441 aaPredicted RBP13.93□□□□□ -0.18
SCAPER-221ENST00000568549 SMARCA2P51531 1590 aa13.92□□□□□ -0.18
SCAPER-221ENST00000568549 PEG3Q9GZU2 1588 aa13.92□□□□□ -0.18
SCAPER-221ENST00000568549 WIZO95785 1651 aa13.92□□□□□ -0.18
SCAPER-221ENST00000568549 ATAD2BQ9ULI0 1458 aa13.9□□□□□ -0.18
SCAPER-221ENST00000568549 DNAJC5BQ9UF47 199 aa13.88□□□□□ -0.19
SCAPER-221ENST00000568549 NCAPD3P42695 1498 aa13.84□□□□□ -0.19
SCAPER-221ENST00000568549 HMGXB3Q12766 1538 aa13.83□□□□□ -0.2
SCAPER-221ENST00000568549 BAZ1BQ9UIG0 1483 aaKnown RBP13.81□□□□□ -0.2
SCAPER-221ENST00000568549 SENP3Q9H4L4 574 aaPredicted RBP13.81□□□□□ -0.2
SCAPER-221ENST00000568549 SUPT5HO00267 1087 aaKnown RBP13.78□□□□□ -0.2
SCAPER-221ENST00000568549 TOP2AP11388 1531 aaKnown RBP13.77□□□□□ -0.21
SCAPER-221ENST00000568549 CCDC88BA6NC98 1476 aa13.58□□□□□ -0.24
SCAPER-221ENST00000568549 POTEDQ86YR6 584 aa13.52□□□□□ -0.25
SCAPER-221ENST00000568549 PHF23Q9BUL5 403 aaPredicted RBP13.51□□□□□ -0.25
SCAPER-221ENST00000568549 LAMC3Q9Y6N6 1575 aa13.48□□□□□ -0.25
SCAPER-221ENST00000568549 PRDM2Q13029 1718 aa13.47□□□□□ -0.25
SCAPER-221ENST00000568549 NESP48681 1621 aa13.45□□□□□ -0.26
SCAPER-221ENST00000568549 CADPSQ9ULU8 1353 aa13.45□□□□□ -0.26
SCAPER-221ENST00000568549 CFTRP13569 1480 aa13.43□□□□□ -0.26
SCAPER-221ENST00000568549 KIF21AQ7Z4S6 1674 aa13.36□□□□□ -0.27
SCAPER-221ENST00000568549 PDS5BQ9NTI5 1447 aa13.34□□□□□ -0.27
SCAPER-221ENST00000568549 FANCD2Q9BXW9 1451 aa13.32□□□□□ -0.28
SCAPER-221ENST00000568549 ERCC6Q03468 1493 aa13.3□□□□□ -0.28
SCAPER-221ENST00000568549 CEP164Q9UPV0 1460 aa13.29□□□□□ -0.28
SCAPER-221ENST00000568549 THOC2Q8NI27 1593 aaKnown RBP13.22□□□□□ -0.29
SCAPER-221ENST00000568549 MRC2Q9UBG0 1479 aa13.21□□□□□ -0.3
SCAPER-221ENST00000568549 ABCC8Q09428 1581 aa13.2□□□□□ -0.3
SCAPER-221ENST00000568549 URB2Q14146 1524 aaKnown RBP13.17□□□□□ -0.3
SCAPER-221ENST00000568549 DNMBPQ6XZF7 1577 aa13.16□□□□□ -0.3
SCAPER-221ENST00000568549 WDR62O43379 1518 aa13.16□□□□□ -0.3
SCAPER-221ENST00000568549 WRNQ14191 1432 aaPredicted RBP eCLIP13.14□□□□□ -0.31
SCAPER-221ENST00000568549 CUX1P39880 1505 aa13.14□□□□□ -0.31
SCAPER-221ENST00000568549 TOPBP1Q92547 1522 aa13.14□□□□□ -0.31
SCAPER-221ENST00000568549 BIVM-ERCC5R4GMW8 1640 aa13.13□□□□□ -0.31
SCAPER-221ENST00000568549 SYNJ1O43426 1573 aa13.13□□□□□ -0.31
SCAPER-221ENST00000568549 TOP2BQ02880 1626 aa13.12□□□□□ -0.31
SCAPER-221ENST00000568549 CUX2O14529 1486 aa13.06□□□□□ -0.32
SCAPER-221ENST00000568549 FGD5Q6ZNL6 1462 aa13.05□□□□□ -0.32
SCAPER-221ENST00000568549 POLA1P09884 1462 aaPredicted RBP13.04□□□□□ -0.32
SCAPER-221ENST00000568549 TRIM41Q8WV44 630 aa13□□□□□ -0.33
SCAPER-221ENST00000568549 TARBP1Q13395 1621 aaKnown RBP12.99□□□□□ -0.33
SCAPER-221ENST00000568549 WDR97A6NE52 1622 aa12.99□□□□□ -0.33
SCAPER-221ENST00000568549 IFT140Q96RY7 1462 aa12.98□□□□□ -0.33
SCAPER-221ENST00000568549 SOGA1O94964 1423 aa12.98□□□□□ -0.33
SCAPER-221ENST00000568549 RAD54L2Q9Y4B4 1467 aa12.97□□□□□ -0.33
SCAPER-221ENST00000568549 FOXD1Q16676 465 aa12.95□□□□□ -0.34
SCAPER-221ENST00000568549 ABCA10Q8WWZ4 1543 aa12.93□□□□□ -0.34
SCAPER-221ENST00000568549 EIF4G3O43432 1585 aaKnown RBP12.9□□□□□ -0.34
SCAPER-221ENST00000568549 ABCA5Q8WWZ7 1642 aa12.9□□□□□ -0.34
SCAPER-221ENST00000568549 ZNF608Q9ULD9 1512 aaPredicted RBP12.89□□□□□ -0.35
SCAPER-221ENST00000568549 PBRM1Q86U86 1689 aa12.88□□□□□ -0.35
SCAPER-221ENST00000568549 TDRD9Q8NDG6 1382 aaKnown RBP12.86□□□□□ -0.35
SCAPER-221ENST00000568549 AQRO60306 1485 aaKnown RBP eCLIP12.85□□□□□ -0.35
SCAPER-221ENST00000568549 KIF27Q86VH2 1401 aa12.85□□□□□ -0.35
SCAPER-221ENST00000568549 GAPVD1Q14C86 1478 aa12.85□□□□□ -0.35
SCAPER-221ENST00000568549 RUSC2Q8N2Y8 1516 aa12.82□□□□□ -0.36
SCAPER-221ENST00000568549 GRIN2BQ13224 1484 aa12.81□□□□□ -0.36
SCAPER-221ENST00000568549 ERICH3Q5RHP9 1530 aa12.8□□□□□ -0.36
SCAPER-221ENST00000568549 EEA1Q15075 1411 aa12.79□□□□□ -0.36
SCAPER-221ENST00000568549 CUL7Q14999 1698 aa12.77□□□□□ -0.36
SCAPER-221ENST00000568549 SNAPC4Q5SXM2 1469 aa12.77□□□□□ -0.37
SCAPER-221ENST00000568549 ADAMTS12P58397 1594 aa12.75□□□□□ -0.37
SCAPER-221ENST00000568549 MAGI1Q96QZ7 1491 aaPredicted RBP12.75□□□□□ -0.37
SCAPER-221ENST00000568549 IGF1RP08069 1367 aa12.73□□□□□ -0.37
SCAPER-221ENST00000568549 FAM9AQ8IZU1 332 aaPredicted RBP12.73□□□□□ -0.37
SCAPER-221ENST00000568549 CHD1O14646 1710 aa12.72□□□□□ -0.37
SCAPER-221ENST00000568549 FHAD1B1AJZ9 1412 aa12.71□□□□□ -0.38
SCAPER-221ENST00000568549 CSRNP3Q8WYN3 585 aa12.7□□□□□ -0.38
SCAPER-221ENST00000568549 SYNJ2O15056 1496 aa12.7□□□□□ -0.38
SCAPER-221ENST00000568549 CARMIL1Q5VZK9 1371 aa12.68□□□□□ -0.38
SCAPER-221ENST00000568549 KIF21BO75037 1637 aa12.67□□□□□ -0.38
SCAPER-221ENST00000568549 PRXQ9BXM0 1461 aa12.66□□□□□ -0.38
SCAPER-221ENST00000568549 RAPGEF2Q9Y4G8 1499 aa12.65□□□□□ -0.38
SCAPER-221ENST00000568549 CHMP7Q8WUX9 453 aaPredicted RBP12.65□□□□□ -0.38
SCAPER-221ENST00000568549 GRIN2AQ12879 1464 aa12.65□□□□□ -0.38
SCAPER-221ENST00000568549 FBLN2P98095 1184 aa12.64□□□□□ -0.39
SCAPER-221ENST00000568549 CTTNBP2Q8WZ74 1663 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms