RNA–Protein interactions for RNA: ENST00000568508.5

EPB42-207, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 5

Gene EPB42, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-207ENST00000568508 NISCHQ9Y2I1 1504 aa35.51■■■■□ 3.27
EPB42-207ENST00000568508 CCDC180Q9P1Z9 1646 aa31.14■■■□□ 2.57
EPB42-207ENST00000568508 ABCC9O60706 1549 aa29.8■■■□□ 2.36
EPB42-207ENST00000568508 ZCCHC6Q5VYS8 1495 aaKnown RBP29.73■■■□□ 2.35
EPB42-207ENST00000568508 DCAF1Q9Y4B6 1507 aa29.4■■■□□ 2.3
EPB42-207ENST00000568508 DCAF8L2P0C7V8 631 aa29.31■■■□□ 2.28
EPB42-207ENST00000568508 MYO15BQ96JP2 1530 aa29.24■■■□□ 2.27
EPB42-207ENST00000568508 NACADO15069 1562 aa29.13■■■□□ 2.25
EPB42-207ENST00000568508 RB1CC1Q8TDY2 1594 aa28.94■■■□□ 2.22
EPB42-207ENST00000568508 SHROOM4Q9ULL8 1493 aa28.5■■■□□ 2.15
EPB42-207ENST00000568508 SCRIBQ14160 1630 aa28.5■■■□□ 2.15
EPB42-207ENST00000568508 UNC13AQ9UPW8 1703 aa28.35■■■□□ 2.13
EPB42-207ENST00000568508 BICRAQ9NZM4 1560 aa28.16■■■□□ 2.1
EPB42-207ENST00000568508 PABPN1Q86U42 306 aaKnown RBP eCLIP28.03■■■□□ 2.08
EPB42-207ENST00000568508 CECR2Q9BXF3 1484 aa27.63■■■□□ 2.01
EPB42-207ENST00000568508 BAZ1AQ9NRL2 1556 aaPredicted RBP27.41■■□□□ 1.98
EPB42-207ENST00000568508 MROH2BQ7Z745 1585 aa27.41■■□□□ 1.98
EPB42-207ENST00000568508 RSF1Q96T23 1441 aaPredicted RBP27.38■■□□□ 1.97
EPB42-207ENST00000568508 SMARCA4P51532 1647 aa27.35■■□□□ 1.97
EPB42-207ENST00000568508 EIF4G1Q04637 1599 aaKnown RBP27.29■■□□□ 1.96
EPB42-207ENST00000568508 SUPT5HO00267 1087 aaKnown RBP27.21■■□□□ 1.95
EPB42-207ENST00000568508 WIZO95785 1651 aa27.12■■□□□ 1.93
EPB42-207ENST00000568508 PEG3Q9GZU2 1588 aa27.11■■□□□ 1.93
EPB42-207ENST00000568508 ATAD2BQ9ULI0 1458 aa27.05■■□□□ 1.92
EPB42-207ENST00000568508 CC2D2AQ9P2K1 1620 aa26.99■■□□□ 1.91
EPB42-207ENST00000568508 SMARCA2P51531 1590 aa26.98■■□□□ 1.91
EPB42-207ENST00000568508 NCAPD3P42695 1498 aa26.93■■□□□ 1.9
EPB42-207ENST00000568508 TOP2AP11388 1531 aaKnown RBP26.83■■□□□ 1.89
EPB42-207ENST00000568508 DNAJC5BQ9UF47 199 aa26.82■■□□□ 1.88
EPB42-207ENST00000568508 HMGXB3Q12766 1538 aa26.81■■□□□ 1.88
EPB42-207ENST00000568508 BAZ1BQ9UIG0 1483 aaKnown RBP26.81■■□□□ 1.88
EPB42-207ENST00000568508 CCDC88BA6NC98 1476 aa26.58■■□□□ 1.85
EPB42-207ENST00000568508 CFTRP13569 1480 aa26.19■■□□□ 1.78
EPB42-207ENST00000568508 CADPSQ9ULU8 1353 aa26.18■■□□□ 1.78
EPB42-207ENST00000568508 NESP48681 1621 aa26.06■■□□□ 1.76
EPB42-207ENST00000568508 LAMC3Q9Y6N6 1575 aa26.03■■□□□ 1.76
EPB42-207ENST00000568508 PRDM2Q13029 1718 aa25.93■■□□□ 1.74
EPB42-207ENST00000568508 CHIC1Q5VXU3 224 aa25.91■■□□□ 1.74
EPB42-207ENST00000568508 FANCD2Q9BXW9 1451 aa25.84■■□□□ 1.73
EPB42-207ENST00000568508 PDS5BQ9NTI5 1447 aa25.82■■□□□ 1.72
EPB42-207ENST00000568508 ABCC8Q09428 1581 aa25.81■■□□□ 1.72
EPB42-207ENST00000568508 WRNQ14191 1432 aaPredicted RBP eCLIP25.73■■□□□ 1.71
EPB42-207ENST00000568508 CEP164Q9UPV0 1460 aa25.7■■□□□ 1.71
EPB42-207ENST00000568508 KIF21AQ7Z4S6 1674 aa25.7■■□□□ 1.7
EPB42-207ENST00000568508 SYNJ1O43426 1573 aa25.64■■□□□ 1.7
EPB42-207ENST00000568508 CUX1P39880 1505 aa25.64■■□□□ 1.7
EPB42-207ENST00000568508 TRIM41Q8WV44 630 aa25.64■■□□□ 1.7
EPB42-207ENST00000568508 TOP2BQ02880 1626 aa25.59■■□□□ 1.69
EPB42-207ENST00000568508 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.69
EPB42-207ENST00000568508 BIVM-ERCC5R4GMW8 1640 aa25.57■■□□□ 1.68
EPB42-207ENST00000568508 ERCC6Q03468 1493 aa25.55■■□□□ 1.68
EPB42-207ENST00000568508 TOPBP1Q92547 1522 aa25.53■■□□□ 1.68
EPB42-207ENST00000568508 DNMBPQ6XZF7 1577 aa25.52■■□□□ 1.68
EPB42-207ENST00000568508 MRC2Q9UBG0 1479 aa25.51■■□□□ 1.68
EPB42-207ENST00000568508 THOC2Q8NI27 1593 aaKnown RBP25.44■■□□□ 1.66
EPB42-207ENST00000568508 WDR62O43379 1518 aa25.43■■□□□ 1.66
EPB42-207ENST00000568508 FGD5Q6ZNL6 1462 aa25.41■■□□□ 1.66
EPB42-207ENST00000568508 POLA1P09884 1462 aaPredicted RBP25.38■■□□□ 1.65
EPB42-207ENST00000568508 CUX2O14529 1486 aa25.29■■□□□ 1.64
EPB42-207ENST00000568508 SOGA1O94964 1423 aa25.28■■□□□ 1.64
EPB42-207ENST00000568508 RAD54L2Q9Y4B4 1467 aa25.27■■□□□ 1.64
EPB42-207ENST00000568508 RUSC2Q8N2Y8 1516 aa25.23■■□□□ 1.63
EPB42-207ENST00000568508 ABCA10Q8WWZ4 1543 aa25.21■■□□□ 1.63
EPB42-207ENST00000568508 TARBP1Q13395 1621 aaKnown RBP25.21■■□□□ 1.63
EPB42-207ENST00000568508 WDR97A6NE52 1622 aa25.14■■□□□ 1.62
EPB42-207ENST00000568508 IFT140Q96RY7 1462 aa25.14■■□□□ 1.62
EPB42-207ENST00000568508 EEA1Q15075 1411 aa25.12■■□□□ 1.61
EPB42-207ENST00000568508 KIF27Q86VH2 1401 aa25.11■■□□□ 1.61
EPB42-207ENST00000568508 FAM9AQ8IZU1 332 aaPredicted RBP25.11■■□□□ 1.61
EPB42-207ENST00000568508 TDRD9Q8NDG6 1382 aaKnown RBP25.07■■□□□ 1.6
EPB42-207ENST00000568508 CSRNP3Q8WYN3 585 aa25.05■■□□□ 1.6
EPB42-207ENST00000568508 ZNF608Q9ULD9 1512 aaPredicted RBP25.04■■□□□ 1.6
EPB42-207ENST00000568508 ABCA5Q8WWZ7 1642 aa25.02■■□□□ 1.6
EPB42-207ENST00000568508 IGF1RP08069 1367 aa25.01■■□□□ 1.59
EPB42-207ENST00000568508 AQRO60306 1485 aaKnown RBP eCLIP24.99■■□□□ 1.59
EPB42-207ENST00000568508 GAPVD1Q14C86 1478 aa24.98■■□□□ 1.59
EPB42-207ENST00000568508 PRXQ9BXM0 1461 aa24.9■■□□□ 1.58
EPB42-207ENST00000568508 EIF4G3O43432 1585 aaKnown RBP24.9■■□□□ 1.58
EPB42-207ENST00000568508 ERICH3Q5RHP9 1530 aa24.89■■□□□ 1.58
EPB42-207ENST00000568508 LOC105371045A0A1W2PR82 267 aa24.88■■□□□ 1.57
EPB42-207ENST00000568508 GRIN2BQ13224 1484 aa24.86■■□□□ 1.57
EPB42-207ENST00000568508 CARMIL1Q5VZK9 1371 aa24.82■■□□□ 1.56
EPB42-207ENST00000568508 PBRM1Q86U86 1689 aa24.82■■□□□ 1.56
EPB42-207ENST00000568508 KIF21BO75037 1637 aa24.81■■□□□ 1.56
EPB42-207ENST00000568508 RAPGEF2Q9Y4G8 1499 aa24.78■■□□□ 1.56
EPB42-207ENST00000568508 CUL7Q14999 1698 aa24.76■■□□□ 1.55
EPB42-207ENST00000568508 SNAPC4Q5SXM2 1469 aa24.72■■□□□ 1.55
EPB42-207ENST00000568508 GOLGA3Q08378 1498 aa24.72■■□□□ 1.55
EPB42-207ENST00000568508 FHAD1B1AJZ9 1412 aa24.72■■□□□ 1.55
EPB42-207ENST00000568508 EHMT2Q96KQ7 1210 aa24.71■■□□□ 1.55
EPB42-207ENST00000568508 MAGI1Q96QZ7 1491 aaPredicted RBP24.71■■□□□ 1.55
EPB42-207ENST00000568508 ADAMTS12P58397 1594 aa24.7■■□□□ 1.54
EPB42-207ENST00000568508 TNIKQ9UKE5 1360 aa24.61■■□□□ 1.53
EPB42-207ENST00000568508 SYNJ2O15056 1496 aa24.61■■□□□ 1.53
EPB42-207ENST00000568508 UBTFP17480 764 aaKnown RBP24.59■■□□□ 1.53
EPB42-207ENST00000568508 GRIN2AQ12879 1464 aa24.55■■□□□ 1.52
EPB42-207ENST00000568508 CHMP7Q8WUX9 453 aaPredicted RBP24.54■■□□□ 1.52
EPB42-207ENST00000568508 FBLN2P98095 1184 aa24.47■■□□□ 1.51
EPB42-207ENST00000568508 NUP160Q12769 1436 aa24.45■■□□□ 1.5
EPB42-207ENST00000568508 CHD1O14646 1710 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms