RNA–Protein interactions for RNA: ENST00000568475.1

MT1F-204, Transcript of metallothionein 1F, humanhuman

TSL 2 BASIC

Gene MT1F, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT1F-204ENST00000568475 NISCHQ9Y2I1 1504 aa26.8■■□□□ 1.88
MT1F-204ENST00000568475 CCDC180Q9P1Z9 1646 aa23.61■■□□□ 1.37
MT1F-204ENST00000568475 ABCC9O60706 1549 aa22.72■■□□□ 1.23
MT1F-204ENST00000568475 ZCCHC6Q5VYS8 1495 aaKnown RBP22.43■■□□□ 1.18
MT1F-204ENST00000568475 DCAF8L2P0C7V8 631 aa22.33■■□□□ 1.17
MT1F-204ENST00000568475 DCAF1Q9Y4B6 1507 aa22.2■■□□□ 1.14
MT1F-204ENST00000568475 NACADO15069 1562 aa22.12■■□□□ 1.13
MT1F-204ENST00000568475 MYO15BQ96JP2 1530 aa22.12■■□□□ 1.13
MT1F-204ENST00000568475 RB1CC1Q8TDY2 1594 aa22.05■■□□□ 1.12
MT1F-204ENST00000568475 SCRIBQ14160 1630 aa21.61■■□□□ 1.05
MT1F-204ENST00000568475 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.04
MT1F-204ENST00000568475 UNC13AQ9UPW8 1703 aa21.43■■□□□ 1.02
MT1F-204ENST00000568475 PABPN1Q86U42 306 aaKnown RBP eCLIP21.31■■□□□ 1
MT1F-204ENST00000568475 BICRAQ9NZM4 1560 aa21.28■■□□□ 1
MT1F-204ENST00000568475 CECR2Q9BXF3 1484 aa20.81■□□□□ 0.92
MT1F-204ENST00000568475 BAZ1AQ9NRL2 1556 aaPredicted RBP20.77■□□□□ 0.92
MT1F-204ENST00000568475 EIF4G1Q04637 1599 aaKnown RBP20.73■□□□□ 0.91
MT1F-204ENST00000568475 SMARCA4P51532 1647 aa20.7■□□□□ 0.9
MT1F-204ENST00000568475 MROH2BQ7Z745 1585 aa20.65■□□□□ 0.9
MT1F-204ENST00000568475 RSF1Q96T23 1441 aaPredicted RBP20.61■□□□□ 0.89
MT1F-204ENST00000568475 CC2D2AQ9P2K1 1620 aa20.53■□□□□ 0.88
MT1F-204ENST00000568475 SUPT5HO00267 1087 aaKnown RBP20.52■□□□□ 0.88
MT1F-204ENST00000568475 SMARCA2P51531 1590 aa20.51■□□□□ 0.87
MT1F-204ENST00000568475 ATAD2BQ9ULI0 1458 aa20.49■□□□□ 0.87
MT1F-204ENST00000568475 PEG3Q9GZU2 1588 aa20.47■□□□□ 0.87
MT1F-204ENST00000568475 WIZO95785 1651 aa20.45■□□□□ 0.86
MT1F-204ENST00000568475 NCAPD3P42695 1498 aa20.4■□□□□ 0.86
MT1F-204ENST00000568475 BAZ1BQ9UIG0 1483 aaKnown RBP20.37■□□□□ 0.85
MT1F-204ENST00000568475 DNAJC5BQ9UF47 199 aa20.37■□□□□ 0.85
MT1F-204ENST00000568475 HMGXB3Q12766 1538 aa20.34■□□□□ 0.85
MT1F-204ENST00000568475 TOP2AP11388 1531 aaKnown RBP20.29■□□□□ 0.84
MT1F-204ENST00000568475 CCDC88BA6NC98 1476 aa20.05■□□□□ 0.8
MT1F-204ENST00000568475 CADPSQ9ULU8 1353 aa19.86■□□□□ 0.77
MT1F-204ENST00000568475 CFTRP13569 1480 aa19.81■□□□□ 0.76
MT1F-204ENST00000568475 LAMC3Q9Y6N6 1575 aa19.8■□□□□ 0.76
MT1F-204ENST00000568475 NESP48681 1621 aa19.76■□□□□ 0.75
MT1F-204ENST00000568475 PDS5BQ9NTI5 1447 aa19.69■□□□□ 0.74
MT1F-204ENST00000568475 PRDM2Q13029 1718 aa19.64■□□□□ 0.73
MT1F-204ENST00000568475 FANCD2Q9BXW9 1451 aa19.63■□□□□ 0.73
MT1F-204ENST00000568475 ERCC6Q03468 1493 aa19.59■□□□□ 0.73
MT1F-204ENST00000568475 CEP164Q9UPV0 1460 aa19.57■□□□□ 0.72
MT1F-204ENST00000568475 KIF21AQ7Z4S6 1674 aa19.5■□□□□ 0.71
MT1F-204ENST00000568475 WRNQ14191 1432 aaPredicted RBP eCLIP19.46■□□□□ 0.71
MT1F-204ENST00000568475 ABCC8Q09428 1581 aa19.45■□□□□ 0.7
MT1F-204ENST00000568475 MRC2Q9UBG0 1479 aa19.44■□□□□ 0.7
MT1F-204ENST00000568475 CHIC1Q5VXU3 224 aa19.37■□□□□ 0.69
MT1F-204ENST00000568475 TRIM41Q8WV44 630 aa19.37■□□□□ 0.69
MT1F-204ENST00000568475 DNMBPQ6XZF7 1577 aa19.36■□□□□ 0.69
MT1F-204ENST00000568475 URB2Q14146 1524 aaKnown RBP19.36■□□□□ 0.69
MT1F-204ENST00000568475 CUX1P39880 1505 aa19.35■□□□□ 0.69
MT1F-204ENST00000568475 TOPBP1Q92547 1522 aa19.35■□□□□ 0.69
MT1F-204ENST00000568475 THOC2Q8NI27 1593 aaKnown RBP19.34■□□□□ 0.69
MT1F-204ENST00000568475 WDR62O43379 1518 aa19.33■□□□□ 0.68
MT1F-204ENST00000568475 SYNJ1O43426 1573 aa19.32■□□□□ 0.68
MT1F-204ENST00000568475 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
MT1F-204ENST00000568475 BIVM-ERCC5R4GMW8 1640 aa19.29■□□□□ 0.68
MT1F-204ENST00000568475 FGD5Q6ZNL6 1462 aa19.25■□□□□ 0.67
MT1F-204ENST00000568475 POLA1P09884 1462 aaPredicted RBP19.22■□□□□ 0.67
MT1F-204ENST00000568475 SOGA1O94964 1423 aa19.17■□□□□ 0.66
MT1F-204ENST00000568475 CUX2O14529 1486 aa19.17■□□□□ 0.66
MT1F-204ENST00000568475 IFT140Q96RY7 1462 aa19.15■□□□□ 0.66
MT1F-204ENST00000568475 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
MT1F-204ENST00000568475 ABCA10Q8WWZ4 1543 aa19.08■□□□□ 0.64
MT1F-204ENST00000568475 TARBP1Q13395 1621 aaKnown RBP19.06■□□□□ 0.64
MT1F-204ENST00000568475 KIF27Q86VH2 1401 aa19.03■□□□□ 0.64
MT1F-204ENST00000568475 TDRD9Q8NDG6 1382 aaKnown RBP19.01■□□□□ 0.63
MT1F-204ENST00000568475 WDR97A6NE52 1622 aa19■□□□□ 0.63
MT1F-204ENST00000568475 EEA1Q15075 1411 aa18.99■□□□□ 0.63
MT1F-204ENST00000568475 ZNF608Q9ULD9 1512 aaPredicted RBP18.97■□□□□ 0.63
MT1F-204ENST00000568475 GAPVD1Q14C86 1478 aa18.96■□□□□ 0.63
MT1F-204ENST00000568475 FAM9AQ8IZU1 332 aaPredicted RBP18.95■□□□□ 0.62
MT1F-204ENST00000568475 AQRO60306 1485 aaKnown RBP eCLIP18.95■□□□□ 0.62
MT1F-204ENST00000568475 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
MT1F-204ENST00000568475 RUSC2Q8N2Y8 1516 aa18.92■□□□□ 0.62
MT1F-204ENST00000568475 EIF4G3O43432 1585 aaKnown RBP18.92■□□□□ 0.62
MT1F-204ENST00000568475 GRIN2BQ13224 1484 aa18.9■□□□□ 0.62
MT1F-204ENST00000568475 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
MT1F-204ENST00000568475 ERICH3Q5RHP9 1530 aa18.86■□□□□ 0.61
MT1F-204ENST00000568475 IGF1RP08069 1367 aa18.85■□□□□ 0.61
MT1F-204ENST00000568475 PBRM1Q86U86 1689 aa18.83■□□□□ 0.61
MT1F-204ENST00000568475 SNAPC4Q5SXM2 1469 aa18.79■□□□□ 0.6
MT1F-204ENST00000568475 MAGI1Q96QZ7 1491 aaPredicted RBP18.79■□□□□ 0.6
MT1F-204ENST00000568475 CARMIL1Q5VZK9 1371 aa18.79■□□□□ 0.6
MT1F-204ENST00000568475 CUL7Q14999 1698 aa18.78■□□□□ 0.6
MT1F-204ENST00000568475 FHAD1B1AJZ9 1412 aa18.76■□□□□ 0.59
MT1F-204ENST00000568475 ADAMTS12P58397 1594 aa18.73■□□□□ 0.59
MT1F-204ENST00000568475 PRXQ9BXM0 1461 aa18.73■□□□□ 0.59
MT1F-204ENST00000568475 RAPGEF2Q9Y4G8 1499 aa18.72■□□□□ 0.59
MT1F-204ENST00000568475 CHMP7Q8WUX9 453 aaPredicted RBP18.72■□□□□ 0.59
MT1F-204ENST00000568475 FBLN2P98095 1184 aa18.71■□□□□ 0.59
MT1F-204ENST00000568475 SYNJ2O15056 1496 aa18.71■□□□□ 0.59
MT1F-204ENST00000568475 KIF21BO75037 1637 aa18.69■□□□□ 0.58
MT1F-204ENST00000568475 GOLGA3Q08378 1498 aa18.67■□□□□ 0.58
MT1F-204ENST00000568475 EHMT2Q96KQ7 1210 aa18.67■□□□□ 0.58
MT1F-204ENST00000568475 GRIN2AQ12879 1464 aa18.64■□□□□ 0.57
MT1F-204ENST00000568475 UBTFP17480 764 aaKnown RBP18.63■□□□□ 0.57
MT1F-204ENST00000568475 LOC105371045A0A1W2PR82 267 aa18.58■□□□□ 0.56
MT1F-204ENST00000568475 CHD1O14646 1710 aa18.56■□□□□ 0.56
MT1F-204ENST00000568475 NUP160Q12769 1436 aa18.52■□□□□ 0.56
MT1F-204ENST00000568475 TNIKQ9UKE5 1360 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms