RNA–Protein interactions for RNA: ENST00000568423.5

SCAMP5-218, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 3

Gene SCAMP5, Length 1,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-218ENST00000568423 NISCHQ9Y2I1 1504 aa43.45■■■■■ 4.55
SCAMP5-218ENST00000568423 CCDC180Q9P1Z9 1646 aa38.84■■■■□ 3.81
SCAMP5-218ENST00000568423 ABCC9O60706 1549 aa38.6■■■■□ 3.77
SCAMP5-218ENST00000568423 RB1CC1Q8TDY2 1594 aa36.9■■■■□ 3.5
SCAMP5-218ENST00000568423 DCAF8L2P0C7V8 631 aa36.76■■■■□ 3.48
SCAMP5-218ENST00000568423 NACADO15069 1562 aa36.7■■■■□ 3.47
SCAMP5-218ENST00000568423 MYO15BQ96JP2 1530 aa36.27■■■■□ 3.4
SCAMP5-218ENST00000568423 ZCCHC6Q5VYS8 1495 aaKnown RBP36.13■■■■□ 3.37
SCAMP5-218ENST00000568423 PABPN1Q86U42 306 aaKnown RBP eCLIP36.03■■■■□ 3.36
SCAMP5-218ENST00000568423 UNC13AQ9UPW8 1703 aa35.93■■■■□ 3.34
SCAMP5-218ENST00000568423 DCAF1Q9Y4B6 1507 aa35.91■■■■□ 3.34
SCAMP5-218ENST00000568423 DNAJC5BQ9UF47 199 aa35.89■■■■□ 3.34
SCAMP5-218ENST00000568423 BICRAQ9NZM4 1560 aa35.68■■■■□ 3.3
SCAMP5-218ENST00000568423 SCRIBQ14160 1630 aa35.43■■■■□ 3.26
SCAMP5-218ENST00000568423 SHROOM4Q9ULL8 1493 aa35.35■■■■□ 3.25
SCAMP5-218ENST00000568423 EIF4G1Q04637 1599 aaKnown RBP34.86■■■■□ 3.17
SCAMP5-218ENST00000568423 CC2D2AQ9P2K1 1620 aa34.85■■■■□ 3.17
SCAMP5-218ENST00000568423 CECR2Q9BXF3 1484 aa34.76■■■■□ 3.15
SCAMP5-218ENST00000568423 NCAPD3P42695 1498 aa33.88■■■■□ 3.01
SCAMP5-218ENST00000568423 SMARCA4P51532 1647 aa33.81■■■■□ 3
SCAMP5-218ENST00000568423 ATAD2BQ9ULI0 1458 aa33.79■■■■□ 3
SCAMP5-218ENST00000568423 SMARCA2P51531 1590 aa33.77■■■■□ 3
SCAMP5-218ENST00000568423 BAZ1AQ9NRL2 1556 aaPredicted RBP33.74■■■□□ 2.99
SCAMP5-218ENST00000568423 HMGXB3Q12766 1538 aa33.62■■■□□ 2.97
SCAMP5-218ENST00000568423 BAZ1BQ9UIG0 1483 aaKnown RBP33.53■■■□□ 2.96
SCAMP5-218ENST00000568423 PEG3Q9GZU2 1588 aa33.47■■■□□ 2.95
SCAMP5-218ENST00000568423 MROH2BQ7Z745 1585 aa33.45■■■□□ 2.95
SCAMP5-218ENST00000568423 ERCC6Q03468 1493 aa33.39■■■□□ 2.94
SCAMP5-218ENST00000568423 NESP48681 1621 aa33.2■■■□□ 2.9
SCAMP5-218ENST00000568423 CUX2O14529 1486 aa33.17■■■□□ 2.9
SCAMP5-218ENST00000568423 LAMC3Q9Y6N6 1575 aa33.07■■■□□ 2.88
SCAMP5-218ENST00000568423 WIZO95785 1651 aa33.07■■■□□ 2.88
SCAMP5-218ENST00000568423 RSF1Q96T23 1441 aaPredicted RBP33■■■□□ 2.87
SCAMP5-218ENST00000568423 PDS5BQ9NTI5 1447 aa32.94■■■□□ 2.86
SCAMP5-218ENST00000568423 CADPSQ9ULU8 1353 aa32.9■■■□□ 2.86
SCAMP5-218ENST00000568423 DNAJC5Q9H3Z4 198 aa32.85■■■□□ 2.85
SCAMP5-218ENST00000568423 KIF21AQ7Z4S6 1674 aa32.76■■■□□ 2.84
SCAMP5-218ENST00000568423 THOC2Q8NI27 1593 aaKnown RBP32.76■■■□□ 2.84
SCAMP5-218ENST00000568423 TOP2AP11388 1531 aaKnown RBP32.7■■■□□ 2.83
SCAMP5-218ENST00000568423 MRC2Q9UBG0 1479 aa32.57■■■□□ 2.8
SCAMP5-218ENST00000568423 CFTRP13569 1480 aa32.54■■■□□ 2.8
SCAMP5-218ENST00000568423 CEP164Q9UPV0 1460 aa32.53■■■□□ 2.8
SCAMP5-218ENST00000568423 FANCD2Q9BXW9 1451 aa32.5■■■□□ 2.79
SCAMP5-218ENST00000568423 WDR62O43379 1518 aa32.43■■■□□ 2.78
SCAMP5-218ENST00000568423 CCDC88BA6NC98 1476 aa32.34■■■□□ 2.77
SCAMP5-218ENST00000568423 SUPT5HO00267 1087 aaKnown RBP32.19■■■□□ 2.74
SCAMP5-218ENST00000568423 PRDM2Q13029 1718 aa32.19■■■□□ 2.74
SCAMP5-218ENST00000568423 URB2Q14146 1524 aaKnown RBP32.15■■■□□ 2.74
SCAMP5-218ENST00000568423 ABCC8Q09428 1581 aa31.94■■■□□ 2.7
SCAMP5-218ENST00000568423 TOPBP1Q92547 1522 aa31.89■■■□□ 2.7
SCAMP5-218ENST00000568423 IFT140Q96RY7 1462 aa31.87■■■□□ 2.69
SCAMP5-218ENST00000568423 OSCARQ8IYS5 282 aa31.82■■■□□ 2.68
SCAMP5-218ENST00000568423 DNMBPQ6XZF7 1577 aa31.8■■■□□ 2.68
SCAMP5-218ENST00000568423 ZNF608Q9ULD9 1512 aaPredicted RBP31.71■■■□□ 2.67
SCAMP5-218ENST00000568423 TRIM41Q8WV44 630 aa31.59■■■□□ 2.65
SCAMP5-218ENST00000568423 POLA1P09884 1462 aaPredicted RBP31.58■■■□□ 2.65
SCAMP5-218ENST00000568423 EIF4G3O43432 1585 aaKnown RBP31.55■■■□□ 2.64
SCAMP5-218ENST00000568423 TARBP1Q13395 1621 aaKnown RBP31.53■■■□□ 2.64
SCAMP5-218ENST00000568423 SOGA1O94964 1423 aa31.52■■■□□ 2.64
SCAMP5-218ENST00000568423 AQRO60306 1485 aaKnown RBP eCLIP31.52■■■□□ 2.64
SCAMP5-218ENST00000568423 RAD54L2Q9Y4B4 1467 aa31.46■■■□□ 2.63
SCAMP5-218ENST00000568423 FGD5Q6ZNL6 1462 aa31.43■■■□□ 2.62
SCAMP5-218ENST00000568423 CUX1P39880 1505 aa31.41■■■□□ 2.62
SCAMP5-218ENST00000568423 FBLN2P98095 1184 aa31.39■■■□□ 2.62
SCAMP5-218ENST00000568423 TDRD9Q8NDG6 1382 aaKnown RBP31.39■■■□□ 2.62
SCAMP5-218ENST00000568423 WDR97A6NE52 1622 aa31.31■■■□□ 2.6
SCAMP5-218ENST00000568423 CHD1O14646 1710 aa31.26■■■□□ 2.59
SCAMP5-218ENST00000568423 RIMBP3CA6NJZ7 1639 aa31.2■■■□□ 2.59
SCAMP5-218ENST00000568423 RIMBP3BA6NNM3 1639 aa31.2■■■□□ 2.59
SCAMP5-218ENST00000568423 RIMBP3Q9UFD9 1639 aa31.2■■■□□ 2.59
SCAMP5-218ENST00000568423 CHMP7Q8WUX9 453 aaPredicted RBP31.2■■■□□ 2.59
SCAMP5-218ENST00000568423 GRIN2BQ13224 1484 aa31.19■■■□□ 2.58
SCAMP5-218ENST00000568423 SNAPC4Q5SXM2 1469 aa31.19■■■□□ 2.58
SCAMP5-218ENST00000568423 ARHGEF11O15085 1522 aa31.16■■■□□ 2.58
SCAMP5-218ENST00000568423 MAGI1Q96QZ7 1491 aaPredicted RBP31.15■■■□□ 2.58
SCAMP5-218ENST00000568423 BIVM-ERCC5R4GMW8 1640 aa31.13■■■□□ 2.57
SCAMP5-218ENST00000568423 GAPVD1Q14C86 1478 aa31.12■■■□□ 2.57
SCAMP5-218ENST00000568423 SYNJ1O43426 1573 aa31.11■■■□□ 2.57
SCAMP5-218ENST00000568423 WRNQ14191 1432 aaPredicted RBP eCLIP31.11■■■□□ 2.57
SCAMP5-218ENST00000568423 ABCA10Q8WWZ4 1543 aa31.1■■■□□ 2.57
SCAMP5-218ENST00000568423 TOP2BQ02880 1626 aa31.09■■■□□ 2.57
SCAMP5-218ENST00000568423 SYNJ2O15056 1496 aa31.04■■■□□ 2.56
SCAMP5-218ENST00000568423 CYB5RLQ6IPT4 315 aa31.04■■■□□ 2.56
SCAMP5-218ENST00000568423 PBRM1Q86U86 1689 aa31.01■■■□□ 2.55
SCAMP5-218ENST00000568423 ABCA5Q8WWZ7 1642 aa30.96■■■□□ 2.55
SCAMP5-218ENST00000568423 CLASP1Q7Z460 1538 aa30.88■■■□□ 2.53
SCAMP5-218ENST00000568423 ARAP1Q96P48 1450 aa30.85■■■□□ 2.53
SCAMP5-218ENST00000568423 GRIN2AQ12879 1464 aa30.76■■■□□ 2.51
SCAMP5-218ENST00000568423 FHAD1B1AJZ9 1412 aa30.74■■■□□ 2.51
SCAMP5-218ENST00000568423 ERICH3Q5RHP9 1530 aa30.73■■■□□ 2.51
SCAMP5-218ENST00000568423 ADAMTS12P58397 1594 aa30.72■■■□□ 2.51
SCAMP5-218ENST00000568423 TRHP20396 242 aaPredicted RBP30.66■■■□□ 2.5
SCAMP5-218ENST00000568423 NUP160Q12769 1436 aa30.62■■■□□ 2.49
SCAMP5-218ENST00000568423 CEP170Q5SW79 1584 aa30.58■■■□□ 2.49
SCAMP5-218ENST00000568423 KIF27Q86VH2 1401 aa30.52■■■□□ 2.48
SCAMP5-218ENST00000568423 JPH4Q96JJ6 628 aa30.43■■■□□ 2.46
SCAMP5-218ENST00000568423 IGF1RP08069 1367 aa30.42■■■□□ 2.46
SCAMP5-218ENST00000568423 ERCC6L2Q5T890 1561 aa30.41■■■□□ 2.46
SCAMP5-218ENST00000568423 SHROOM2Q13796 1616 aa30.4■■■□□ 2.46
SCAMP5-218ENST00000568423 PRG4Q92954 1404 aaPredicted RBP30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms