RNA–Protein interactions for RNA: ENST00000568413.1

RPAP1-211, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 586 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-211ENST00000568413 NISCHQ9Y2I1 1504 aa21.13■□□□□ 0.97
RPAP1-211ENST00000568413 ABCC9O60706 1549 aa18.88■□□□□ 0.61
RPAP1-211ENST00000568413 CCDC180Q9P1Z9 1646 aa18.8■□□□□ 0.6
RPAP1-211ENST00000568413 RB1CC1Q8TDY2 1594 aa17.88■□□□□ 0.45
RPAP1-211ENST00000568413 NACADO15069 1562 aa17.74■□□□□ 0.43
RPAP1-211ENST00000568413 DCAF8L2P0C7V8 631 aa17.73■□□□□ 0.43
RPAP1-211ENST00000568413 DNAJC5BQ9UF47 199 aa17.7■□□□□ 0.42
RPAP1-211ENST00000568413 ZCCHC6Q5VYS8 1495 aaKnown RBP17.61■□□□□ 0.41
RPAP1-211ENST00000568413 UNC13AQ9UPW8 1703 aa17.61■□□□□ 0.41
RPAP1-211ENST00000568413 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
RPAP1-211ENST00000568413 MYO15BQ96JP2 1530 aa17.52■□□□□ 0.39
RPAP1-211ENST00000568413 DCAF1Q9Y4B6 1507 aa17.5■□□□□ 0.39
RPAP1-211ENST00000568413 BICRAQ9NZM4 1560 aa17.43■□□□□ 0.38
RPAP1-211ENST00000568413 SCRIBQ14160 1630 aa17.24■□□□□ 0.35
RPAP1-211ENST00000568413 SHROOM4Q9ULL8 1493 aa17.04■□□□□ 0.32
RPAP1-211ENST00000568413 CC2D2AQ9P2K1 1620 aa17.03■□□□□ 0.32
RPAP1-211ENST00000568413 EIF4G1Q04637 1599 aaKnown RBP16.98■□□□□ 0.31
RPAP1-211ENST00000568413 CECR2Q9BXF3 1484 aa16.96■□□□□ 0.31
RPAP1-211ENST00000568413 SMARCA4P51532 1647 aa16.38■□□□□ 0.21
RPAP1-211ENST00000568413 BAZ1AQ9NRL2 1556 aaPredicted RBP16.37■□□□□ 0.21
RPAP1-211ENST00000568413 NCAPD3P42695 1498 aa16.36■□□□□ 0.21
RPAP1-211ENST00000568413 ATAD2BQ9ULI0 1458 aa16.36■□□□□ 0.21
RPAP1-211ENST00000568413 SMARCA2P51531 1590 aa16.29■□□□□ 0.2
RPAP1-211ENST00000568413 HMGXB3Q12766 1538 aa16.28■□□□□ 0.2
RPAP1-211ENST00000568413 MROH2BQ7Z745 1585 aa16.27■□□□□ 0.2
RPAP1-211ENST00000568413 ERCC6Q03468 1493 aa16.25■□□□□ 0.19
RPAP1-211ENST00000568413 NESP48681 1621 aa16.23■□□□□ 0.19
RPAP1-211ENST00000568413 BAZ1BQ9UIG0 1483 aaKnown RBP16.22■□□□□ 0.19
RPAP1-211ENST00000568413 RSF1Q96T23 1441 aaPredicted RBP16.18■□□□□ 0.18
RPAP1-211ENST00000568413 PEG3Q9GZU2 1588 aa16.17■□□□□ 0.18
RPAP1-211ENST00000568413 CUX2O14529 1486 aa16.16■□□□□ 0.18
RPAP1-211ENST00000568413 DNAJC5Q9H3Z4 198 aa16.15■□□□□ 0.18
RPAP1-211ENST00000568413 WIZO95785 1651 aa16.1■□□□□ 0.17
RPAP1-211ENST00000568413 KIF21AQ7Z4S6 1674 aa16.05■□□□□ 0.16
RPAP1-211ENST00000568413 THOC2Q8NI27 1593 aaKnown RBP16.04■□□□□ 0.16
RPAP1-211ENST00000568413 LAMC3Q9Y6N6 1575 aa16.02■□□□□ 0.16
RPAP1-211ENST00000568413 SUPT5HO00267 1087 aaKnown RBP15.95■□□□□ 0.14
RPAP1-211ENST00000568413 TOP2AP11388 1531 aaKnown RBP15.94■□□□□ 0.14
RPAP1-211ENST00000568413 PDS5BQ9NTI5 1447 aa15.9■□□□□ 0.14
RPAP1-211ENST00000568413 CADPSQ9ULU8 1353 aa15.87■□□□□ 0.13
RPAP1-211ENST00000568413 MRC2Q9UBG0 1479 aa15.82■□□□□ 0.12
RPAP1-211ENST00000568413 CCDC88BA6NC98 1476 aa15.78■□□□□ 0.12
RPAP1-211ENST00000568413 WDR62O43379 1518 aa15.78■□□□□ 0.12
RPAP1-211ENST00000568413 CEP164Q9UPV0 1460 aa15.76■□□□□ 0.11
RPAP1-211ENST00000568413 FANCD2Q9BXW9 1451 aa15.75■□□□□ 0.11
RPAP1-211ENST00000568413 CFTRP13569 1480 aa15.71■□□□□ 0.1
RPAP1-211ENST00000568413 URB2Q14146 1524 aaKnown RBP15.65■□□□□ 0.1
RPAP1-211ENST00000568413 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
RPAP1-211ENST00000568413 TRIM41Q8WV44 630 aa15.55■□□□□ 0.08
RPAP1-211ENST00000568413 ZNF608Q9ULD9 1512 aaPredicted RBP15.47■□□□□ 0.07
RPAP1-211ENST00000568413 TOPBP1Q92547 1522 aa15.46■□□□□ 0.07
RPAP1-211ENST00000568413 IFT140Q96RY7 1462 aa15.41■□□□□ 0.06
RPAP1-211ENST00000568413 OSCARQ8IYS5 282 aa15.41■□□□□ 0.06
RPAP1-211ENST00000568413 DNMBPQ6XZF7 1577 aa15.39■□□□□ 0.05
RPAP1-211ENST00000568413 EIF4G3O43432 1585 aaKnown RBP15.38■□□□□ 0.05
RPAP1-211ENST00000568413 ABCC8Q09428 1581 aa15.37■□□□□ 0.05
RPAP1-211ENST00000568413 TARBP1Q13395 1621 aaKnown RBP15.33■□□□□ 0.04
RPAP1-211ENST00000568413 RIMBP3CA6NJZ7 1639 aa15.32■□□□□ 0.04
RPAP1-211ENST00000568413 RIMBP3BA6NNM3 1639 aa15.32■□□□□ 0.04
RPAP1-211ENST00000568413 RIMBP3Q9UFD9 1639 aa15.32■□□□□ 0.04
RPAP1-211ENST00000568413 AQRO60306 1485 aaKnown RBP eCLIP15.32■□□□□ 0.04
RPAP1-211ENST00000568413 CHD1O14646 1710 aa15.31■□□□□ 0.04
RPAP1-211ENST00000568413 POLA1P09884 1462 aaPredicted RBP15.3■□□□□ 0.04
RPAP1-211ENST00000568413 RAD54L2Q9Y4B4 1467 aa15.28■□□□□ 0.04
RPAP1-211ENST00000568413 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
RPAP1-211ENST00000568413 ARHGEF11O15085 1522 aa15.25■□□□□ 0.03
RPAP1-211ENST00000568413 CUX1P39880 1505 aa15.25■□□□□ 0.03
RPAP1-211ENST00000568413 FGD5Q6ZNL6 1462 aa15.22■□□□□ 0.03
RPAP1-211ENST00000568413 TDRD9Q8NDG6 1382 aaKnown RBP15.21■□□□□ 0.02
RPAP1-211ENST00000568413 SOGA1O94964 1423 aa15.2■□□□□ 0.02
RPAP1-211ENST00000568413 FBLN2P98095 1184 aa15.2■□□□□ 0.02
RPAP1-211ENST00000568413 TOP2BQ02880 1626 aa15.17■□□□□ 0.02
RPAP1-211ENST00000568413 SNAPC4Q5SXM2 1469 aa15.16■□□□□ 0.02
RPAP1-211ENST00000568413 SYNJ1O43426 1573 aa15.15■□□□□ 0.02
RPAP1-211ENST00000568413 BIVM-ERCC5R4GMW8 1640 aa15.15■□□□□ 0.02
RPAP1-211ENST00000568413 WDR97A6NE52 1622 aa15.14■□□□□ 0.01
RPAP1-211ENST00000568413 CYB5RLQ6IPT4 315 aa15.12■□□□□ 0.01
RPAP1-211ENST00000568413 ARAP1Q96P48 1450 aa15.12■□□□□ 0.01
RPAP1-211ENST00000568413 PBRM1Q86U86 1689 aa15.09■□□□□ 0.01
RPAP1-211ENST00000568413 CLASP1Q7Z460 1538 aa15.07■□□□□ 0
RPAP1-211ENST00000568413 GRIN2BQ13224 1484 aa15.06■□□□□ 0
RPAP1-211ENST00000568413 ABCA10Q8WWZ4 1543 aa15.06■□□□□ 0
RPAP1-211ENST00000568413 MAGI1Q96QZ7 1491 aaPredicted RBP15.05■□□□□ -0
RPAP1-211ENST00000568413 CHMP7Q8WUX9 453 aaPredicted RBP15.04■□□□□ -0
RPAP1-211ENST00000568413 ABCA5Q8WWZ7 1642 aa15.03■□□□□ -0
RPAP1-211ENST00000568413 GAPVD1Q14C86 1478 aa15.02■□□□□ -0
RPAP1-211ENST00000568413 SYNJ2O15056 1496 aa15.01□□□□□ -0.01
RPAP1-211ENST00000568413 CHIC1Q5VXU3 224 aa15□□□□□ -0.01
RPAP1-211ENST00000568413 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
RPAP1-211ENST00000568413 KIF27Q86VH2 1401 aa14.93□□□□□ -0.02
RPAP1-211ENST00000568413 ADAMTS12P58397 1594 aa14.92□□□□□ -0.02
RPAP1-211ENST00000568413 ERCC6L2Q5T890 1561 aa14.91□□□□□ -0.02
RPAP1-211ENST00000568413 GRIN2AQ12879 1464 aa14.89□□□□□ -0.03
RPAP1-211ENST00000568413 CEP170Q5SW79 1584 aa14.89□□□□□ -0.03
RPAP1-211ENST00000568413 ERICH3Q5RHP9 1530 aa14.88□□□□□ -0.03
RPAP1-211ENST00000568413 IGF1RP08069 1367 aa14.86□□□□□ -0.03
RPAP1-211ENST00000568413 FHAD1B1AJZ9 1412 aa14.83□□□□□ -0.04
RPAP1-211ENST00000568413 NUP160Q12769 1436 aa14.83□□□□□ -0.04
RPAP1-211ENST00000568413 RUSC2Q8N2Y8 1516 aa14.82□□□□□ -0.04
RPAP1-211ENST00000568413 CARMIL1Q5VZK9 1371 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms