RNA–Protein interactions for RNA: ENST00000568382.5

SCAPER-219, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-219ENST00000568382 NISCHQ9Y2I1 1504 aa29.97■■■□□ 2.39
SCAPER-219ENST00000568382 CCDC180Q9P1Z9 1646 aa26.64■■□□□ 1.85
SCAPER-219ENST00000568382 AEBP2Q6ZN18 517 aaPredicted RBP26.51■■□□□ 1.83
SCAPER-219ENST00000568382 ABCC9O60706 1549 aa26.18■■□□□ 1.78
SCAPER-219ENST00000568382 CHIC1Q5VXU3 224 aa25.41■■□□□ 1.66
SCAPER-219ENST00000568382 DCAF8L2P0C7V8 631 aa25.13■■□□□ 1.61
SCAPER-219ENST00000568382 RB1CC1Q8TDY2 1594 aa25.12■■□□□ 1.61
SCAPER-219ENST00000568382 NACADO15069 1562 aa25.08■■□□□ 1.61
SCAPER-219ENST00000568382 ZCCHC6Q5VYS8 1495 aaKnown RBP24.92■■□□□ 1.58
SCAPER-219ENST00000568382 MYO15BQ96JP2 1530 aa24.88■■□□□ 1.57
SCAPER-219ENST00000568382 DCAF1Q9Y4B6 1507 aa24.76■■□□□ 1.55
SCAPER-219ENST00000568382 UNC13AQ9UPW8 1703 aa24.61■■□□□ 1.53
SCAPER-219ENST00000568382 PABPN1Q86U42 306 aaKnown RBP eCLIP24.49■■□□□ 1.51
SCAPER-219ENST00000568382 BICRAQ9NZM4 1560 aa24.4■■□□□ 1.5
SCAPER-219ENST00000568382 SCRIBQ14160 1630 aa24.33■■□□□ 1.49
SCAPER-219ENST00000568382 DNAJC5BQ9UF47 199 aa24.17■■□□□ 1.46
SCAPER-219ENST00000568382 SHROOM4Q9ULL8 1493 aa24.05■■□□□ 1.44
SCAPER-219ENST00000568382 EIF4G1Q04637 1599 aaKnown RBP23.74■■□□□ 1.39
SCAPER-219ENST00000568382 CC2D2AQ9P2K1 1620 aa23.67■■□□□ 1.38
SCAPER-219ENST00000568382 CECR2Q9BXF3 1484 aa23.51■■□□□ 1.35
SCAPER-219ENST00000568382 SMARCA4P51532 1647 aa23.26■■□□□ 1.31
SCAPER-219ENST00000568382 BAZ1AQ9NRL2 1556 aaPredicted RBP23.21■■□□□ 1.31
SCAPER-219ENST00000568382 NCAPD3P42695 1498 aa23.16■■□□□ 1.3
SCAPER-219ENST00000568382 ATAD2BQ9ULI0 1458 aa23.16■■□□□ 1.3
SCAPER-219ENST00000568382 MROH2BQ7Z745 1585 aa23.11■■□□□ 1.29
SCAPER-219ENST00000568382 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
SCAPER-219ENST00000568382 PEG3Q9GZU2 1588 aa23.02■■□□□ 1.28
SCAPER-219ENST00000568382 HMGXB3Q12766 1538 aa23■■□□□ 1.27
SCAPER-219ENST00000568382 BAZ1BQ9UIG0 1483 aaKnown RBP22.94■■□□□ 1.26
SCAPER-219ENST00000568382 WIZO95785 1651 aa22.87■■□□□ 1.25
SCAPER-219ENST00000568382 RSF1Q96T23 1441 aaPredicted RBP22.82■■□□□ 1.24
SCAPER-219ENST00000568382 NESP48681 1621 aa22.65■■□□□ 1.22
SCAPER-219ENST00000568382 TOP2AP11388 1531 aaKnown RBP22.57■■□□□ 1.2
SCAPER-219ENST00000568382 LAMC3Q9Y6N6 1575 aa22.54■■□□□ 1.2
SCAPER-219ENST00000568382 ERCC6Q03468 1493 aa22.54■■□□□ 1.2
SCAPER-219ENST00000568382 CADPSQ9ULU8 1353 aa22.49■■□□□ 1.19
SCAPER-219ENST00000568382 SENP3Q9H4L4 574 aaPredicted RBP22.43■■□□□ 1.18
SCAPER-219ENST00000568382 PHF23Q9BUL5 403 aaPredicted RBP22.39■■□□□ 1.17
SCAPER-219ENST00000568382 PDS5BQ9NTI5 1447 aa22.39■■□□□ 1.17
SCAPER-219ENST00000568382 KIF21AQ7Z4S6 1674 aa22.37■■□□□ 1.17
SCAPER-219ENST00000568382 CCDC88BA6NC98 1476 aa22.35■■□□□ 1.17
SCAPER-219ENST00000568382 CFTRP13569 1480 aa22.33■■□□□ 1.16
SCAPER-219ENST00000568382 CUX2O14529 1486 aa22.31■■□□□ 1.16
SCAPER-219ENST00000568382 THOC2Q8NI27 1593 aaKnown RBP22.28■■□□□ 1.16
SCAPER-219ENST00000568382 SUPT5HO00267 1087 aaKnown RBP22.22■■□□□ 1.15
SCAPER-219ENST00000568382 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
SCAPER-219ENST00000568382 CEP164Q9UPV0 1460 aa22.17■■□□□ 1.14
SCAPER-219ENST00000568382 MRC2Q9UBG0 1479 aa22.16■■□□□ 1.14
SCAPER-219ENST00000568382 PRDM2Q13029 1718 aa22.15■■□□□ 1.14
SCAPER-219ENST00000568382 WDR62O43379 1518 aa22.1■■□□□ 1.13
SCAPER-219ENST00000568382 URB2Q14146 1524 aaKnown RBP22.01■■□□□ 1.11
SCAPER-219ENST00000568382 TOPBP1Q92547 1522 aa21.85■■□□□ 1.09
SCAPER-219ENST00000568382 ABCC8Q09428 1581 aa21.83■■□□□ 1.09
SCAPER-219ENST00000568382 DNMBPQ6XZF7 1577 aa21.81■■□□□ 1.08
SCAPER-219ENST00000568382 DNAJC5Q9H3Z4 198 aa21.78■■□□□ 1.08
SCAPER-219ENST00000568382 IFT140Q96RY7 1462 aa21.71■■□□□ 1.07
SCAPER-219ENST00000568382 CUX1P39880 1505 aa21.68■■□□□ 1.06
SCAPER-219ENST00000568382 ZNF608Q9ULD9 1512 aaPredicted RBP21.66■■□□□ 1.06
SCAPER-219ENST00000568382 POLA1P09884 1462 aaPredicted RBP21.66■■□□□ 1.06
SCAPER-219ENST00000568382 TARBP1Q13395 1621 aaKnown RBP21.63■■□□□ 1.05
SCAPER-219ENST00000568382 FGD5Q6ZNL6 1462 aa21.6■■□□□ 1.05
SCAPER-219ENST00000568382 RAD54L2Q9Y4B4 1467 aa21.6■■□□□ 1.05
SCAPER-219ENST00000568382 SOGA1O94964 1423 aa21.6■■□□□ 1.05
SCAPER-219ENST00000568382 EIF4G3O43432 1585 aaKnown RBP21.54■■□□□ 1.04
SCAPER-219ENST00000568382 AQRO60306 1485 aaKnown RBP eCLIP21.54■■□□□ 1.04
SCAPER-219ENST00000568382 WRNQ14191 1432 aaPredicted RBP eCLIP21.5■■□□□ 1.03
SCAPER-219ENST00000568382 TDRD9Q8NDG6 1382 aaKnown RBP21.49■■□□□ 1.03
SCAPER-219ENST00000568382 SYNJ1O43426 1573 aa21.46■■□□□ 1.03
SCAPER-219ENST00000568382 TOP2BQ02880 1626 aa21.46■■□□□ 1.03
SCAPER-219ENST00000568382 BIVM-ERCC5R4GMW8 1640 aa21.46■■□□□ 1.03
SCAPER-219ENST00000568382 OSCARQ8IYS5 282 aa21.44■■□□□ 1.02
SCAPER-219ENST00000568382 WDR97A6NE52 1622 aa21.42■■□□□ 1.02
SCAPER-219ENST00000568382 ABCA10Q8WWZ4 1543 aa21.38■■□□□ 1.01
SCAPER-219ENST00000568382 GAPVD1Q14C86 1478 aa21.32■■□□□ 1
SCAPER-219ENST00000568382 CHD1O14646 1710 aa21.32■■□□□ 1
SCAPER-219ENST00000568382 GRIN2BQ13224 1484 aa21.32■■□□□ 1
SCAPER-219ENST00000568382 ABCA5Q8WWZ7 1642 aa21.3■■□□□ 1
SCAPER-219ENST00000568382 FBLN2P98095 1184 aa21.3■■□□□ 1
SCAPER-219ENST00000568382 SNAPC4Q5SXM2 1469 aa21.3■■□□□ 1
SCAPER-219ENST00000568382 PBRM1Q86U86 1689 aa21.29■■□□□ 1
SCAPER-219ENST00000568382 MAGI1Q96QZ7 1491 aaPredicted RBP21.26■□□□□ 0.99
SCAPER-219ENST00000568382 CHMP7Q8WUX9 453 aaPredicted RBP21.22■□□□□ 0.99
SCAPER-219ENST00000568382 SYNJ2O15056 1496 aa21.2■□□□□ 0.98
SCAPER-219ENST00000568382 ERICH3Q5RHP9 1530 aa21.11■□□□□ 0.97
SCAPER-219ENST00000568382 ADAMTS12P58397 1594 aa21.09■□□□□ 0.97
SCAPER-219ENST00000568382 RIMBP3CA6NJZ7 1639 aa21.08■□□□□ 0.97
SCAPER-219ENST00000568382 RIMBP3BA6NNM3 1639 aa21.08■□□□□ 0.97
SCAPER-219ENST00000568382 RIMBP3Q9UFD9 1639 aa21.08■□□□□ 0.97
SCAPER-219ENST00000568382 FHAD1B1AJZ9 1412 aa21.06■□□□□ 0.96
SCAPER-219ENST00000568382 ARHGEF11O15085 1522 aa21.05■□□□□ 0.96
SCAPER-219ENST00000568382 CLASP1Q7Z460 1538 aa21.05■□□□□ 0.96
SCAPER-219ENST00000568382 GRIN2AQ12879 1464 aa21.05■□□□□ 0.96
SCAPER-219ENST00000568382 KIF27Q86VH2 1401 aa21.04■□□□□ 0.96
SCAPER-219ENST00000568382 TRIM41Q8WV44 630 aa21.03■□□□□ 0.96
SCAPER-219ENST00000568382 IGF1RP08069 1367 aa21.01■□□□□ 0.95
SCAPER-219ENST00000568382 FOXD1Q16676 465 aa20.96■□□□□ 0.95
SCAPER-219ENST00000568382 CEP170Q5SW79 1584 aa20.96■□□□□ 0.95
SCAPER-219ENST00000568382 NUP160Q12769 1436 aa20.95■□□□□ 0.95
SCAPER-219ENST00000568382 CYB5RLQ6IPT4 315 aa20.92■□□□□ 0.94
SCAPER-219ENST00000568382 CUL7Q14999 1698 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms