RNA–Protein interactions for RNA: ENST00000568328.5

VWA3A-208, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-208ENST00000568328 NISCHQ9Y2I1 1504 aa24.79■■□□□ 1.56
VWA3A-208ENST00000568328 CCDC180Q9P1Z9 1646 aa22.39■■□□□ 1.17
VWA3A-208ENST00000568328 ABCC9O60706 1549 aa22.1■■□□□ 1.13
VWA3A-208ENST00000568328 RB1CC1Q8TDY2 1594 aa21.26■□□□□ 0.99
VWA3A-208ENST00000568328 NACADO15069 1562 aa21.14■□□□□ 0.97
VWA3A-208ENST00000568328 MYO15BQ96JP2 1530 aa20.92■□□□□ 0.94
VWA3A-208ENST00000568328 DCAF8L2P0C7V8 631 aa20.7■□□□□ 0.9
VWA3A-208ENST00000568328 DCAF1Q9Y4B6 1507 aa20.63■□□□□ 0.89
VWA3A-208ENST00000568328 UNC13AQ9UPW8 1703 aa20.62■□□□□ 0.89
VWA3A-208ENST00000568328 DNAJC5BQ9UF47 199 aa20.58■□□□□ 0.88
VWA3A-208ENST00000568328 ZCCHC6Q5VYS8 1495 aaKnown RBP20.55■□□□□ 0.88
VWA3A-208ENST00000568328 SHROOM4Q9ULL8 1493 aa20.53■□□□□ 0.88
VWA3A-208ENST00000568328 PABPN1Q86U42 306 aaKnown RBP eCLIP20.49■□□□□ 0.87
VWA3A-208ENST00000568328 BICRAQ9NZM4 1560 aa20.48■□□□□ 0.87
VWA3A-208ENST00000568328 SCRIBQ14160 1630 aa20.18■□□□□ 0.82
VWA3A-208ENST00000568328 CC2D2AQ9P2K1 1620 aa20.04■□□□□ 0.8
VWA3A-208ENST00000568328 EIF4G1Q04637 1599 aaKnown RBP20.02■□□□□ 0.8
VWA3A-208ENST00000568328 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
VWA3A-208ENST00000568328 NCAPD3P42695 1498 aa19.44■□□□□ 0.7
VWA3A-208ENST00000568328 SMARCA2P51531 1590 aa19.4■□□□□ 0.7
VWA3A-208ENST00000568328 HMGXB3Q12766 1538 aa19.35■□□□□ 0.69
VWA3A-208ENST00000568328 SMARCA4P51532 1647 aa19.34■□□□□ 0.69
VWA3A-208ENST00000568328 ATAD2BQ9ULI0 1458 aa19.33■□□□□ 0.69
VWA3A-208ENST00000568328 BAZ1AQ9NRL2 1556 aaPredicted RBP19.3■□□□□ 0.68
VWA3A-208ENST00000568328 CUX2O14529 1486 aa19.27■□□□□ 0.68
VWA3A-208ENST00000568328 PEG3Q9GZU2 1588 aa19.22■□□□□ 0.67
VWA3A-208ENST00000568328 ERCC6Q03468 1493 aa19.2■□□□□ 0.66
VWA3A-208ENST00000568328 BAZ1BQ9UIG0 1483 aaKnown RBP19.17■□□□□ 0.66
VWA3A-208ENST00000568328 DNAJC5Q9H3Z4 198 aa19.08■□□□□ 0.65
VWA3A-208ENST00000568328 LAMC3Q9Y6N6 1575 aa19.05■□□□□ 0.64
VWA3A-208ENST00000568328 MROH2BQ7Z745 1585 aa19■□□□□ 0.63
VWA3A-208ENST00000568328 NESP48681 1621 aa18.94■□□□□ 0.62
VWA3A-208ENST00000568328 PDS5BQ9NTI5 1447 aa18.93■□□□□ 0.62
VWA3A-208ENST00000568328 THOC2Q8NI27 1593 aaKnown RBP18.9■□□□□ 0.62
VWA3A-208ENST00000568328 CADPSQ9ULU8 1353 aa18.82■□□□□ 0.6
VWA3A-208ENST00000568328 KIF21AQ7Z4S6 1674 aa18.79■□□□□ 0.6
VWA3A-208ENST00000568328 WIZO95785 1651 aa18.77■□□□□ 0.59
VWA3A-208ENST00000568328 MRC2Q9UBG0 1479 aa18.75■□□□□ 0.59
VWA3A-208ENST00000568328 WDR62O43379 1518 aa18.69■□□□□ 0.58
VWA3A-208ENST00000568328 TOP2AP11388 1531 aaKnown RBP18.68■□□□□ 0.58
VWA3A-208ENST00000568328 CEP164Q9UPV0 1460 aa18.65■□□□□ 0.58
VWA3A-208ENST00000568328 RSF1Q96T23 1441 aaPredicted RBP18.64■□□□□ 0.57
VWA3A-208ENST00000568328 CFTRP13569 1480 aa18.62■□□□□ 0.57
VWA3A-208ENST00000568328 FANCD2Q9BXW9 1451 aa18.59■□□□□ 0.57
VWA3A-208ENST00000568328 PRDM2Q13029 1718 aa18.53■□□□□ 0.56
VWA3A-208ENST00000568328 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.53
VWA3A-208ENST00000568328 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
VWA3A-208ENST00000568328 CCDC88BA6NC98 1476 aa18.36■□□□□ 0.53
VWA3A-208ENST00000568328 IFT140Q96RY7 1462 aa18.33■□□□□ 0.52
VWA3A-208ENST00000568328 OSCARQ8IYS5 282 aa18.28■□□□□ 0.52
VWA3A-208ENST00000568328 DNMBPQ6XZF7 1577 aa18.24■□□□□ 0.51
VWA3A-208ENST00000568328 TOPBP1Q92547 1522 aa18.24■□□□□ 0.51
VWA3A-208ENST00000568328 TRIM41Q8WV44 630 aa18.14■□□□□ 0.49
VWA3A-208ENST00000568328 WDR97A6NE52 1622 aa18.13■□□□□ 0.49
VWA3A-208ENST00000568328 EIF4G3O43432 1585 aaKnown RBP18.1■□□□□ 0.49
VWA3A-208ENST00000568328 ZNF608Q9ULD9 1512 aaPredicted RBP18.09■□□□□ 0.49
VWA3A-208ENST00000568328 TARBP1Q13395 1621 aaKnown RBP18.08■□□□□ 0.48
VWA3A-208ENST00000568328 POLA1P09884 1462 aaPredicted RBP18.02■□□□□ 0.48
VWA3A-208ENST00000568328 RIMBP3CA6NJZ7 1639 aa18.02■□□□□ 0.47
VWA3A-208ENST00000568328 RIMBP3BA6NNM3 1639 aa18.02■□□□□ 0.47
VWA3A-208ENST00000568328 RIMBP3Q9UFD9 1639 aa18.02■□□□□ 0.47
VWA3A-208ENST00000568328 SOGA1O94964 1423 aa17.97■□□□□ 0.47
VWA3A-208ENST00000568328 ARHGEF11O15085 1522 aa17.95■□□□□ 0.46
VWA3A-208ENST00000568328 CHD1O14646 1710 aa17.95■□□□□ 0.46
VWA3A-208ENST00000568328 AQRO60306 1485 aaKnown RBP eCLIP17.94■□□□□ 0.46
VWA3A-208ENST00000568328 FGD5Q6ZNL6 1462 aa17.91■□□□□ 0.46
VWA3A-208ENST00000568328 MAGI1Q96QZ7 1491 aaPredicted RBP17.9■□□□□ 0.46
VWA3A-208ENST00000568328 CUX1P39880 1505 aa17.89■□□□□ 0.45
VWA3A-208ENST00000568328 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
VWA3A-208ENST00000568328 GRIN2BQ13224 1484 aa17.88■□□□□ 0.45
VWA3A-208ENST00000568328 SYNJ1O43426 1573 aa17.86■□□□□ 0.45
VWA3A-208ENST00000568328 SNAPC4Q5SXM2 1469 aa17.84■□□□□ 0.45
VWA3A-208ENST00000568328 TDRD9Q8NDG6 1382 aaKnown RBP17.82■□□□□ 0.44
VWA3A-208ENST00000568328 FBLN2P98095 1184 aa17.81■□□□□ 0.44
VWA3A-208ENST00000568328 CLASP1Q7Z460 1538 aa17.8■□□□□ 0.44
VWA3A-208ENST00000568328 SYNJ2O15056 1496 aa17.8■□□□□ 0.44
VWA3A-208ENST00000568328 ABCA10Q8WWZ4 1543 aa17.78■□□□□ 0.44
VWA3A-208ENST00000568328 CHMP7Q8WUX9 453 aaPredicted RBP17.78■□□□□ 0.44
VWA3A-208ENST00000568328 PBRM1Q86U86 1689 aa17.78■□□□□ 0.44
VWA3A-208ENST00000568328 GAPVD1Q14C86 1478 aa17.77■□□□□ 0.43
VWA3A-208ENST00000568328 ARAP1Q96P48 1450 aa17.76■□□□□ 0.43
VWA3A-208ENST00000568328 ABCA5Q8WWZ7 1642 aa17.74■□□□□ 0.43
VWA3A-208ENST00000568328 CYB5RLQ6IPT4 315 aa17.72■□□□□ 0.43
VWA3A-208ENST00000568328 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
VWA3A-208ENST00000568328 BIVM-ERCC5R4GMW8 1640 aa17.71■□□□□ 0.42
VWA3A-208ENST00000568328 TOP2BQ02880 1626 aa17.68■□□□□ 0.42
VWA3A-208ENST00000568328 SUPT5HO00267 1087 aaKnown RBP17.67■□□□□ 0.42
VWA3A-208ENST00000568328 ADAMTS12P58397 1594 aa17.62■□□□□ 0.41
VWA3A-208ENST00000568328 ERICH3Q5RHP9 1530 aa17.61■□□□□ 0.41
VWA3A-208ENST00000568328 GRIN2AQ12879 1464 aa17.6■□□□□ 0.41
VWA3A-208ENST00000568328 FHAD1B1AJZ9 1412 aa17.6■□□□□ 0.41
VWA3A-208ENST00000568328 NUP160Q12769 1436 aa17.56■□□□□ 0.4
VWA3A-208ENST00000568328 TRHP20396 242 aaPredicted RBP17.56■□□□□ 0.4
VWA3A-208ENST00000568328 SHROOM2Q13796 1616 aa17.5■□□□□ 0.39
VWA3A-208ENST00000568328 CEP170Q5SW79 1584 aa17.49■□□□□ 0.39
VWA3A-208ENST00000568328 CUL7Q14999 1698 aa17.38■□□□□ 0.37
VWA3A-208ENST00000568328 KIF27Q86VH2 1401 aa17.35■□□□□ 0.37
VWA3A-208ENST00000568328 RUSC2Q8N2Y8 1516 aa17.34■□□□□ 0.37
VWA3A-208ENST00000568328 ERCC6L2Q5T890 1561 aa17.34■□□□□ 0.37
VWA3A-208ENST00000568328 PRG4Q92954 1404 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms