RNA–Protein interactions for RNA: ENST00000568226.5

XYLT1-203, Transcript of xylosyltransferase 1, humanhuman

TSL 3

Gene XYLT1, Length 839 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XYLT1-203ENST00000568226 NISCHQ9Y2I1 1504 aa22.47■■□□□ 1.19
XYLT1-203ENST00000568226 CCDC180Q9P1Z9 1646 aa20.02■□□□□ 0.8
XYLT1-203ENST00000568226 ABCC9O60706 1549 aa19.81■□□□□ 0.76
XYLT1-203ENST00000568226 RB1CC1Q8TDY2 1594 aa18.9■□□□□ 0.62
XYLT1-203ENST00000568226 NACADO15069 1562 aa18.84■□□□□ 0.61
XYLT1-203ENST00000568226 DCAF8L2P0C7V8 631 aa18.79■□□□□ 0.6
XYLT1-203ENST00000568226 ZCCHC6Q5VYS8 1495 aaKnown RBP18.71■□□□□ 0.59
XYLT1-203ENST00000568226 UNC13AQ9UPW8 1703 aa18.65■□□□□ 0.58
XYLT1-203ENST00000568226 MYO15BQ96JP2 1530 aa18.64■□□□□ 0.57
XYLT1-203ENST00000568226 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
XYLT1-203ENST00000568226 PABPN1Q86U42 306 aaKnown RBP eCLIP18.49■□□□□ 0.55
XYLT1-203ENST00000568226 BICRAQ9NZM4 1560 aa18.47■□□□□ 0.55
XYLT1-203ENST00000568226 DNAJC5BQ9UF47 199 aa18.4■□□□□ 0.54
XYLT1-203ENST00000568226 SCRIBQ14160 1630 aa18.34■□□□□ 0.53
XYLT1-203ENST00000568226 SHROOM4Q9ULL8 1493 aa18.06■□□□□ 0.48
XYLT1-203ENST00000568226 EIF4G1Q04637 1599 aaKnown RBP17.93■□□□□ 0.46
XYLT1-203ENST00000568226 CC2D2AQ9P2K1 1620 aa17.91■□□□□ 0.46
XYLT1-203ENST00000568226 CECR2Q9BXF3 1484 aa17.77■□□□□ 0.44
XYLT1-203ENST00000568226 SMARCA4P51532 1647 aa17.5■□□□□ 0.39
XYLT1-203ENST00000568226 ATAD2BQ9ULI0 1458 aa17.43■□□□□ 0.38
XYLT1-203ENST00000568226 NCAPD3P42695 1498 aa17.39■□□□□ 0.37
XYLT1-203ENST00000568226 BAZ1AQ9NRL2 1556 aaPredicted RBP17.39■□□□□ 0.37
XYLT1-203ENST00000568226 MROH2BQ7Z745 1585 aa17.38■□□□□ 0.37
XYLT1-203ENST00000568226 SMARCA2P51531 1590 aa17.33■□□□□ 0.37
XYLT1-203ENST00000568226 HMGXB3Q12766 1538 aa17.31■□□□□ 0.36
XYLT1-203ENST00000568226 PEG3Q9GZU2 1588 aa17.3■□□□□ 0.36
XYLT1-203ENST00000568226 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
XYLT1-203ENST00000568226 WIZO95785 1651 aa17.21■□□□□ 0.35
XYLT1-203ENST00000568226 NESP48681 1621 aa17.15■□□□□ 0.34
XYLT1-203ENST00000568226 RSF1Q96T23 1441 aaPredicted RBP17.08■□□□□ 0.32
XYLT1-203ENST00000568226 ERCC6Q03468 1493 aa17■□□□□ 0.31
XYLT1-203ENST00000568226 LAMC3Q9Y6N6 1575 aa16.96■□□□□ 0.31
XYLT1-203ENST00000568226 TOP2AP11388 1531 aaKnown RBP16.94■□□□□ 0.3
XYLT1-203ENST00000568226 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
XYLT1-203ENST00000568226 THOC2Q8NI27 1593 aaKnown RBP16.89■□□□□ 0.3
XYLT1-203ENST00000568226 CADPSQ9ULU8 1353 aa16.87■□□□□ 0.29
XYLT1-203ENST00000568226 CUX2O14529 1486 aa16.86■□□□□ 0.29
XYLT1-203ENST00000568226 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
XYLT1-203ENST00000568226 CFTRP13569 1480 aa16.76■□□□□ 0.27
XYLT1-203ENST00000568226 CCDC88BA6NC98 1476 aa16.75■□□□□ 0.27
XYLT1-203ENST00000568226 FANCD2Q9BXW9 1451 aa16.72■□□□□ 0.27
XYLT1-203ENST00000568226 MRC2Q9UBG0 1479 aa16.7■□□□□ 0.26
XYLT1-203ENST00000568226 CEP164Q9UPV0 1460 aa16.68■□□□□ 0.26
XYLT1-203ENST00000568226 WDR62O43379 1518 aa16.68■□□□□ 0.26
XYLT1-203ENST00000568226 PRDM2Q13029 1718 aa16.67■□□□□ 0.26
XYLT1-203ENST00000568226 URB2Q14146 1524 aaKnown RBP16.62■□□□□ 0.25
XYLT1-203ENST00000568226 DNAJC5Q9H3Z4 198 aa16.56■□□□□ 0.24
XYLT1-203ENST00000568226 SUPT5HO00267 1087 aaKnown RBP16.51■□□□□ 0.23
XYLT1-203ENST00000568226 TOPBP1Q92547 1522 aa16.45■□□□□ 0.22
XYLT1-203ENST00000568226 DNMBPQ6XZF7 1577 aa16.39■□□□□ 0.21
XYLT1-203ENST00000568226 ZNF608Q9ULD9 1512 aaPredicted RBP16.38■□□□□ 0.21
XYLT1-203ENST00000568226 IFT140Q96RY7 1462 aa16.32■□□□□ 0.2
XYLT1-203ENST00000568226 TARBP1Q13395 1621 aaKnown RBP16.31■□□□□ 0.2
XYLT1-203ENST00000568226 CUX1P39880 1505 aa16.31■□□□□ 0.2
XYLT1-203ENST00000568226 ABCC8Q09428 1581 aa16.3■□□□□ 0.2
XYLT1-203ENST00000568226 POLA1P09884 1462 aaPredicted RBP16.3■□□□□ 0.2
XYLT1-203ENST00000568226 EIF4G3O43432 1585 aaKnown RBP16.28■□□□□ 0.2
XYLT1-203ENST00000568226 RAD54L2Q9Y4B4 1467 aa16.28■□□□□ 0.2
XYLT1-203ENST00000568226 FGD5Q6ZNL6 1462 aa16.24■□□□□ 0.19
XYLT1-203ENST00000568226 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.19
XYLT1-203ENST00000568226 SOGA1O94964 1423 aa16.19■□□□□ 0.18
XYLT1-203ENST00000568226 WDR97A6NE52 1622 aa16.17■□□□□ 0.18
XYLT1-203ENST00000568226 TDRD9Q8NDG6 1382 aaKnown RBP16.16■□□□□ 0.18
XYLT1-203ENST00000568226 CHD1O14646 1710 aa16.14■□□□□ 0.17
XYLT1-203ENST00000568226 SYNJ1O43426 1573 aa16.13■□□□□ 0.17
XYLT1-203ENST00000568226 OSCARQ8IYS5 282 aa16.1■□□□□ 0.17
XYLT1-203ENST00000568226 BIVM-ERCC5R4GMW8 1640 aa16.09■□□□□ 0.17
XYLT1-203ENST00000568226 TOP2BQ02880 1626 aa16.08■□□□□ 0.17
XYLT1-203ENST00000568226 WRNQ14191 1432 aaPredicted RBP eCLIP16.07■□□□□ 0.16
XYLT1-203ENST00000568226 SNAPC4Q5SXM2 1469 aa16.07■□□□□ 0.16
XYLT1-203ENST00000568226 PBRM1Q86U86 1689 aa16.05■□□□□ 0.16
XYLT1-203ENST00000568226 ABCA5Q8WWZ7 1642 aa16.05■□□□□ 0.16
XYLT1-203ENST00000568226 ABCA10Q8WWZ4 1543 aa16.04■□□□□ 0.16
XYLT1-203ENST00000568226 RIMBP3CA6NJZ7 1639 aa16.01■□□□□ 0.15
XYLT1-203ENST00000568226 RIMBP3BA6NNM3 1639 aa16.01■□□□□ 0.15
XYLT1-203ENST00000568226 RIMBP3Q9UFD9 1639 aa16.01■□□□□ 0.15
XYLT1-203ENST00000568226 GRIN2BQ13224 1484 aa16■□□□□ 0.15
XYLT1-203ENST00000568226 GAPVD1Q14C86 1478 aa16■□□□□ 0.15
XYLT1-203ENST00000568226 FBLN2P98095 1184 aa15.99■□□□□ 0.15
XYLT1-203ENST00000568226 TRIM41Q8WV44 630 aa15.97■□□□□ 0.15
XYLT1-203ENST00000568226 MAGI1Q96QZ7 1491 aaPredicted RBP15.97■□□□□ 0.15
XYLT1-203ENST00000568226 ARHGEF11O15085 1522 aa15.96■□□□□ 0.15
XYLT1-203ENST00000568226 CLASP1Q7Z460 1538 aa15.93■□□□□ 0.14
XYLT1-203ENST00000568226 SYNJ2O15056 1496 aa15.92■□□□□ 0.14
XYLT1-203ENST00000568226 ADAMTS12P58397 1594 aa15.9■□□□□ 0.14
XYLT1-203ENST00000568226 CHMP7Q8WUX9 453 aaPredicted RBP15.88■□□□□ 0.13
XYLT1-203ENST00000568226 ARAP1Q96P48 1450 aa15.84■□□□□ 0.13
XYLT1-203ENST00000568226 GRIN2AQ12879 1464 aa15.83■□□□□ 0.12
XYLT1-203ENST00000568226 ERICH3Q5RHP9 1530 aa15.83■□□□□ 0.12
XYLT1-203ENST00000568226 CEP170Q5SW79 1584 aa15.83■□□□□ 0.12
XYLT1-203ENST00000568226 FHAD1B1AJZ9 1412 aa15.79■□□□□ 0.12
XYLT1-203ENST00000568226 NUP160Q12769 1436 aa15.77■□□□□ 0.12
XYLT1-203ENST00000568226 CYB5RLQ6IPT4 315 aa15.77■□□□□ 0.12
XYLT1-203ENST00000568226 ERCC6L2Q5T890 1561 aa15.77■□□□□ 0.11
XYLT1-203ENST00000568226 IGF1RP08069 1367 aa15.72■□□□□ 0.11
XYLT1-203ENST00000568226 SHROOM2Q13796 1616 aa15.7■□□□□ 0.1
XYLT1-203ENST00000568226 KIF27Q86VH2 1401 aa15.69■□□□□ 0.1
XYLT1-203ENST00000568226 RUSC2Q8N2Y8 1516 aa15.68■□□□□ 0.1
XYLT1-203ENST00000568226 CUL7Q14999 1698 aa15.66■□□□□ 0.1
XYLT1-203ENST00000568226 CARMIL1Q5VZK9 1371 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms