RNA–Protein interactions for RNA: ENST00000568164.1

LDHD-203, Transcript of lactate dehydrogenase D, humanhuman

TSL 3

Gene LDHD, Length 740 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHD-203ENST00000568164 NISCHQ9Y2I1 1504 aa52.33■■■■■ 5.97
LDHD-203ENST00000568164 CCDC180Q9P1Z9 1646 aa46.62■■■■■ 5.05
LDHD-203ENST00000568164 ABCC9O60706 1549 aa45.73■■■■■ 4.91
LDHD-203ENST00000568164 RB1CC1Q8TDY2 1594 aa43.98■■■■■ 4.63
LDHD-203ENST00000568164 NACADO15069 1562 aa43.91■■■■■ 4.62
LDHD-203ENST00000568164 DCAF8L2P0C7V8 631 aa43.68■■■■■ 4.58
LDHD-203ENST00000568164 MYO15BQ96JP2 1530 aa43.66■■■■■ 4.58
LDHD-203ENST00000568164 ZCCHC6Q5VYS8 1495 aaKnown RBP43.56■■■■■ 4.56
LDHD-203ENST00000568164 DCAF1Q9Y4B6 1507 aa43.37■■■■■ 4.53
LDHD-203ENST00000568164 UNC13AQ9UPW8 1703 aa42.87■■■■■ 4.45
LDHD-203ENST00000568164 PABPN1Q86U42 306 aaKnown RBP eCLIP42.69■■■■■ 4.42
LDHD-203ENST00000568164 BICRAQ9NZM4 1560 aa42.63■■■■■ 4.41
LDHD-203ENST00000568164 SCRIBQ14160 1630 aa42.42■■■■■ 4.38
LDHD-203ENST00000568164 SHROOM4Q9ULL8 1493 aa42.3■■■■■ 4.36
LDHD-203ENST00000568164 DNAJC5BQ9UF47 199 aa42.18■■■■■ 4.34
LDHD-203ENST00000568164 EIF4G1Q04637 1599 aaKnown RBP41.53■■■■■ 4.24
LDHD-203ENST00000568164 CC2D2AQ9P2K1 1620 aa41.39■■■■■ 4.22
LDHD-203ENST00000568164 CECR2Q9BXF3 1484 aa41.16■■■■■ 4.18
LDHD-203ENST00000568164 SMARCA4P51532 1647 aa40.62■■■■■ 4.09
LDHD-203ENST00000568164 BAZ1AQ9NRL2 1556 aaPredicted RBP40.58■■■■■ 4.09
LDHD-203ENST00000568164 NCAPD3P42695 1498 aa40.54■■■■■ 4.08
LDHD-203ENST00000568164 ATAD2BQ9ULI0 1458 aa40.49■■■■■ 4.07
LDHD-203ENST00000568164 SMARCA2P51531 1590 aa40.44■■■■■ 4.06
LDHD-203ENST00000568164 PEG3Q9GZU2 1588 aa40.31■■■■■ 4.04
LDHD-203ENST00000568164 HMGXB3Q12766 1538 aa40.3■■■■■ 4.04
LDHD-203ENST00000568164 MROH2BQ7Z745 1585 aa40.28■■■■■ 4.04
LDHD-203ENST00000568164 BAZ1BQ9UIG0 1483 aaKnown RBP40.12■■■■■ 4.01
LDHD-203ENST00000568164 WIZO95785 1651 aa39.8■■■■□ 3.96
LDHD-203ENST00000568164 RSF1Q96T23 1441 aaPredicted RBP39.78■■■■□ 3.96
LDHD-203ENST00000568164 NESP48681 1621 aa39.51■■■■□ 3.91
LDHD-203ENST00000568164 LAMC3Q9Y6N6 1575 aa39.46■■■■□ 3.91
LDHD-203ENST00000568164 ERCC6Q03468 1493 aa39.46■■■■□ 3.91
LDHD-203ENST00000568164 TOP2AP11388 1531 aaKnown RBP39.44■■■■□ 3.9
LDHD-203ENST00000568164 CADPSQ9ULU8 1353 aa39.32■■■■□ 3.88
LDHD-203ENST00000568164 PDS5BQ9NTI5 1447 aa39.23■■■■□ 3.87
LDHD-203ENST00000568164 CUX2O14529 1486 aa39.19■■■■□ 3.86
LDHD-203ENST00000568164 CFTRP13569 1480 aa39.05■■■■□ 3.84
LDHD-203ENST00000568164 KIF21AQ7Z4S6 1674 aa39.01■■■■□ 3.84
LDHD-203ENST00000568164 THOC2Q8NI27 1593 aaKnown RBP38.99■■■■□ 3.83
LDHD-203ENST00000568164 CCDC88BA6NC98 1476 aa38.97■■■■□ 3.83
LDHD-203ENST00000568164 FANCD2Q9BXW9 1451 aa38.84■■■■□ 3.81
LDHD-203ENST00000568164 MRC2Q9UBG0 1479 aa38.8■■■■□ 3.8
LDHD-203ENST00000568164 CEP164Q9UPV0 1460 aa38.8■■■■□ 3.8
LDHD-203ENST00000568164 WDR62O43379 1518 aa38.69■■■■□ 3.78
LDHD-203ENST00000568164 PRDM2Q13029 1718 aa38.65■■■■□ 3.78
LDHD-203ENST00000568164 SUPT5HO00267 1087 aaKnown RBP38.51■■■■□ 3.76
LDHD-203ENST00000568164 URB2Q14146 1524 aaKnown RBP38.44■■■■□ 3.74
LDHD-203ENST00000568164 ABCC8Q09428 1581 aa38.24■■■■□ 3.71
LDHD-203ENST00000568164 DNAJC5Q9H3Z4 198 aa38.22■■■■□ 3.71
LDHD-203ENST00000568164 TOPBP1Q92547 1522 aa38.19■■■■□ 3.7
LDHD-203ENST00000568164 DNMBPQ6XZF7 1577 aa38.13■■■■□ 3.69
LDHD-203ENST00000568164 IFT140Q96RY7 1462 aa38.03■■■■□ 3.68
LDHD-203ENST00000568164 POLA1P09884 1462 aaPredicted RBP37.85■■■■□ 3.65
LDHD-203ENST00000568164 ZNF608Q9ULD9 1512 aaPredicted RBP37.82■■■■□ 3.64
LDHD-203ENST00000568164 CUX1P39880 1505 aa37.8■■■■□ 3.64
LDHD-203ENST00000568164 TARBP1Q13395 1621 aaKnown RBP37.79■■■■□ 3.64
LDHD-203ENST00000568164 FGD5Q6ZNL6 1462 aa37.71■■■■□ 3.63
LDHD-203ENST00000568164 SOGA1O94964 1423 aa37.7■■■■□ 3.63
LDHD-203ENST00000568164 EIF4G3O43432 1585 aaKnown RBP37.66■■■■□ 3.62
LDHD-203ENST00000568164 RAD54L2Q9Y4B4 1467 aa37.64■■■■□ 3.62
LDHD-203ENST00000568164 AQRO60306 1485 aaKnown RBP eCLIP37.58■■■■□ 3.61
LDHD-203ENST00000568164 WDR97A6NE52 1622 aa37.55■■■■□ 3.6
LDHD-203ENST00000568164 WRNQ14191 1432 aaPredicted RBP eCLIP37.52■■■■□ 3.6
LDHD-203ENST00000568164 OSCARQ8IYS5 282 aa37.51■■■■□ 3.6
LDHD-203ENST00000568164 TDRD9Q8NDG6 1382 aaKnown RBP37.48■■■■□ 3.59
LDHD-203ENST00000568164 TOP2BQ02880 1626 aa37.45■■■■□ 3.59
LDHD-203ENST00000568164 BIVM-ERCC5R4GMW8 1640 aa37.43■■■■□ 3.58
LDHD-203ENST00000568164 ABCA10Q8WWZ4 1543 aa37.39■■■■□ 3.58
LDHD-203ENST00000568164 SYNJ1O43426 1573 aa37.38■■■■□ 3.58
LDHD-203ENST00000568164 GRIN2BQ13224 1484 aa37.3■■■■□ 3.56
LDHD-203ENST00000568164 GAPVD1Q14C86 1478 aa37.26■■■■□ 3.55
LDHD-203ENST00000568164 MAGI1Q96QZ7 1491 aaPredicted RBP37.24■■■■□ 3.55
LDHD-203ENST00000568164 SNAPC4Q5SXM2 1469 aa37.23■■■■□ 3.55
LDHD-203ENST00000568164 ABCA5Q8WWZ7 1642 aa37.22■■■■□ 3.55
LDHD-203ENST00000568164 CHD1O14646 1710 aa37.17■■■■□ 3.54
LDHD-203ENST00000568164 FBLN2P98095 1184 aa37.13■■■■□ 3.53
LDHD-203ENST00000568164 PBRM1Q86U86 1689 aa37.12■■■■□ 3.53
LDHD-203ENST00000568164 SYNJ2O15056 1496 aa37.08■■■■□ 3.53
LDHD-203ENST00000568164 CHMP7Q8WUX9 453 aaPredicted RBP37.06■■■■□ 3.52
LDHD-203ENST00000568164 ERICH3Q5RHP9 1530 aa36.95■■■■□ 3.5
LDHD-203ENST00000568164 ARHGEF11O15085 1522 aa36.88■■■■□ 3.49
LDHD-203ENST00000568164 RIMBP3CA6NJZ7 1639 aa36.87■■■■□ 3.49
LDHD-203ENST00000568164 RIMBP3BA6NNM3 1639 aa36.87■■■■□ 3.49
LDHD-203ENST00000568164 RIMBP3Q9UFD9 1639 aa36.87■■■■□ 3.49
LDHD-203ENST00000568164 ADAMTS12P58397 1594 aa36.87■■■■□ 3.49
LDHD-203ENST00000568164 CLASP1Q7Z460 1538 aa36.86■■■■□ 3.49
LDHD-203ENST00000568164 FHAD1B1AJZ9 1412 aa36.85■■■■□ 3.49
LDHD-203ENST00000568164 GRIN2AQ12879 1464 aa36.81■■■■□ 3.48
LDHD-203ENST00000568164 TRIM41Q8WV44 630 aa36.76■■■■□ 3.48
LDHD-203ENST00000568164 KIF27Q86VH2 1401 aa36.76■■■■□ 3.47
LDHD-203ENST00000568164 NUP160Q12769 1436 aa36.68■■■■□ 3.46
LDHD-203ENST00000568164 IGF1RP08069 1367 aa36.65■■■■□ 3.46
LDHD-203ENST00000568164 CEP170Q5SW79 1584 aa36.6■■■■□ 3.45
LDHD-203ENST00000568164 ARAP1Q96P48 1450 aa36.56■■■■□ 3.44
LDHD-203ENST00000568164 CUL7Q14999 1698 aa36.54■■■■□ 3.44
LDHD-203ENST00000568164 CYB5RLQ6IPT4 315 aa36.52■■■■□ 3.44
LDHD-203ENST00000568164 SHROOM2Q13796 1616 aa36.41■■■■□ 3.42
LDHD-203ENST00000568164 CARMIL1Q5VZK9 1371 aa36.4■■■■□ 3.42
LDHD-203ENST00000568164 RUSC2Q8N2Y8 1516 aa36.33■■■■□ 3.41
LDHD-203ENST00000568164 JPH4Q96JJ6 628 aa36.28■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms