RNA–Protein interactions for RNA: ENST00000568160.1

ATP2C2-213, Transcript of ATPase secretory pathway Ca2+ transporting 2, humanhuman

TSL 3

Gene ATP2C2, Length 397 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C2-213ENST00000568160 NISCHQ9Y2I1 1504 aa24.77■■□□□ 1.56
ATP2C2-213ENST00000568160 CCDC180Q9P1Z9 1646 aa22.13■■□□□ 1.13
ATP2C2-213ENST00000568160 ABCC9O60706 1549 aa22.01■■□□□ 1.11
ATP2C2-213ENST00000568160 RB1CC1Q8TDY2 1594 aa20.97■□□□□ 0.95
ATP2C2-213ENST00000568160 NACADO15069 1562 aa20.88■□□□□ 0.93
ATP2C2-213ENST00000568160 DCAF8L2P0C7V8 631 aa20.74■□□□□ 0.91
ATP2C2-213ENST00000568160 MYO15BQ96JP2 1530 aa20.67■□□□□ 0.9
ATP2C2-213ENST00000568160 DNAJC5BQ9UF47 199 aa20.59■□□□□ 0.89
ATP2C2-213ENST00000568160 ZCCHC6Q5VYS8 1495 aaKnown RBP20.57■□□□□ 0.88
ATP2C2-213ENST00000568160 UNC13AQ9UPW8 1703 aa20.56■□□□□ 0.88
ATP2C2-213ENST00000568160 PABPN1Q86U42 306 aaKnown RBP eCLIP20.52■□□□□ 0.88
ATP2C2-213ENST00000568160 DCAF1Q9Y4B6 1507 aa20.47■□□□□ 0.87
ATP2C2-213ENST00000568160 BICRAQ9NZM4 1560 aa20.46■□□□□ 0.87
ATP2C2-213ENST00000568160 SCRIBQ14160 1630 aa20.19■□□□□ 0.82
ATP2C2-213ENST00000568160 SHROOM4Q9ULL8 1493 aa20.12■□□□□ 0.81
ATP2C2-213ENST00000568160 EIF4G1Q04637 1599 aaKnown RBP19.9■□□□□ 0.78
ATP2C2-213ENST00000568160 CC2D2AQ9P2K1 1620 aa19.89■□□□□ 0.77
ATP2C2-213ENST00000568160 CECR2Q9BXF3 1484 aa19.8■□□□□ 0.76
ATP2C2-213ENST00000568160 NCAPD3P42695 1498 aa19.31■□□□□ 0.68
ATP2C2-213ENST00000568160 SMARCA4P51532 1647 aa19.28■□□□□ 0.68
ATP2C2-213ENST00000568160 ATAD2BQ9ULI0 1458 aa19.28■□□□□ 0.68
ATP2C2-213ENST00000568160 SMARCA2P51531 1590 aa19.18■□□□□ 0.66
ATP2C2-213ENST00000568160 BAZ1AQ9NRL2 1556 aaPredicted RBP19.18■□□□□ 0.66
ATP2C2-213ENST00000568160 HMGXB3Q12766 1538 aa19.16■□□□□ 0.66
ATP2C2-213ENST00000568160 MROH2BQ7Z745 1585 aa19.11■□□□□ 0.65
ATP2C2-213ENST00000568160 PEG3Q9GZU2 1588 aa19.11■□□□□ 0.65
ATP2C2-213ENST00000568160 BAZ1BQ9UIG0 1483 aaKnown RBP19.05■□□□□ 0.64
ATP2C2-213ENST00000568160 ERCC6Q03468 1493 aa19.02■□□□□ 0.63
ATP2C2-213ENST00000568160 CUX2O14529 1486 aa18.99■□□□□ 0.63
ATP2C2-213ENST00000568160 NESP48681 1621 aa18.98■□□□□ 0.63
ATP2C2-213ENST00000568160 DNAJC5Q9H3Z4 198 aa18.97■□□□□ 0.63
ATP2C2-213ENST00000568160 WIZO95785 1651 aa18.86■□□□□ 0.61
ATP2C2-213ENST00000568160 LAMC3Q9Y6N6 1575 aa18.82■□□□□ 0.6
ATP2C2-213ENST00000568160 RSF1Q96T23 1441 aaPredicted RBP18.76■□□□□ 0.59
ATP2C2-213ENST00000568160 THOC2Q8NI27 1593 aaKnown RBP18.76■□□□□ 0.59
ATP2C2-213ENST00000568160 PDS5BQ9NTI5 1447 aa18.72■□□□□ 0.59
ATP2C2-213ENST00000568160 CADPSQ9ULU8 1353 aa18.71■□□□□ 0.59
ATP2C2-213ENST00000568160 KIF21AQ7Z4S6 1674 aa18.71■□□□□ 0.59
ATP2C2-213ENST00000568160 TOP2AP11388 1531 aaKnown RBP18.62■□□□□ 0.57
ATP2C2-213ENST00000568160 CFTRP13569 1480 aa18.55■□□□□ 0.56
ATP2C2-213ENST00000568160 MRC2Q9UBG0 1479 aa18.54■□□□□ 0.56
ATP2C2-213ENST00000568160 WDR62O43379 1518 aa18.52■□□□□ 0.56
ATP2C2-213ENST00000568160 FANCD2Q9BXW9 1451 aa18.5■□□□□ 0.55
ATP2C2-213ENST00000568160 CEP164Q9UPV0 1460 aa18.48■□□□□ 0.55
ATP2C2-213ENST00000568160 CCDC88BA6NC98 1476 aa18.43■□□□□ 0.54
ATP2C2-213ENST00000568160 URB2Q14146 1524 aaKnown RBP18.38■□□□□ 0.53
ATP2C2-213ENST00000568160 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
ATP2C2-213ENST00000568160 TOPBP1Q92547 1522 aa18.18■□□□□ 0.5
ATP2C2-213ENST00000568160 OSCARQ8IYS5 282 aa18.17■□□□□ 0.5
ATP2C2-213ENST00000568160 ZNF608Q9ULD9 1512 aaPredicted RBP18.13■□□□□ 0.49
ATP2C2-213ENST00000568160 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
ATP2C2-213ENST00000568160 IFT140Q96RY7 1462 aa18.12■□□□□ 0.49
ATP2C2-213ENST00000568160 DNMBPQ6XZF7 1577 aa18.11■□□□□ 0.49
ATP2C2-213ENST00000568160 ABCC8Q09428 1581 aa18.1■□□□□ 0.49
ATP2C2-213ENST00000568160 TARBP1Q13395 1621 aaKnown RBP18.03■□□□□ 0.48
ATP2C2-213ENST00000568160 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
ATP2C2-213ENST00000568160 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
ATP2C2-213ENST00000568160 AQRO60306 1485 aaKnown RBP eCLIP17.96■□□□□ 0.47
ATP2C2-213ENST00000568160 SUPT5HO00267 1087 aaKnown RBP17.96■□□□□ 0.47
ATP2C2-213ENST00000568160 RAD54L2Q9Y4B4 1467 aa17.95■□□□□ 0.46
ATP2C2-213ENST00000568160 CUX1P39880 1505 aa17.93■□□□□ 0.46
ATP2C2-213ENST00000568160 FGD5Q6ZNL6 1462 aa17.91■□□□□ 0.46
ATP2C2-213ENST00000568160 SOGA1O94964 1423 aa17.89■□□□□ 0.46
ATP2C2-213ENST00000568160 TDRD9Q8NDG6 1382 aaKnown RBP17.86■□□□□ 0.45
ATP2C2-213ENST00000568160 CHD1O14646 1710 aa17.83■□□□□ 0.44
ATP2C2-213ENST00000568160 RIMBP3CA6NJZ7 1639 aa17.82■□□□□ 0.44
ATP2C2-213ENST00000568160 RIMBP3BA6NNM3 1639 aa17.82■□□□□ 0.44
ATP2C2-213ENST00000568160 RIMBP3Q9UFD9 1639 aa17.82■□□□□ 0.44
ATP2C2-213ENST00000568160 WDR97A6NE52 1622 aa17.8■□□□□ 0.44
ATP2C2-213ENST00000568160 ARHGEF11O15085 1522 aa17.78■□□□□ 0.44
ATP2C2-213ENST00000568160 FBLN2P98095 1184 aa17.78■□□□□ 0.44
ATP2C2-213ENST00000568160 SNAPC4Q5SXM2 1469 aa17.76■□□□□ 0.43
ATP2C2-213ENST00000568160 GRIN2BQ13224 1484 aa17.72■□□□□ 0.43
ATP2C2-213ENST00000568160 ABCA10Q8WWZ4 1543 aa17.71■□□□□ 0.43
ATP2C2-213ENST00000568160 MAGI1Q96QZ7 1491 aaPredicted RBP17.7■□□□□ 0.42
ATP2C2-213ENST00000568160 CHMP7Q8WUX9 453 aaPredicted RBP17.69■□□□□ 0.42
ATP2C2-213ENST00000568160 ABCA5Q8WWZ7 1642 aa17.69■□□□□ 0.42
ATP2C2-213ENST00000568160 CYB5RLQ6IPT4 315 aa17.68■□□□□ 0.42
ATP2C2-213ENST00000568160 GAPVD1Q14C86 1478 aa17.68■□□□□ 0.42
ATP2C2-213ENST00000568160 SYNJ1O43426 1573 aa17.67■□□□□ 0.42
ATP2C2-213ENST00000568160 BIVM-ERCC5R4GMW8 1640 aa17.67■□□□□ 0.42
ATP2C2-213ENST00000568160 CLASP1Q7Z460 1538 aa17.67■□□□□ 0.42
ATP2C2-213ENST00000568160 TOP2BQ02880 1626 aa17.66■□□□□ 0.42
ATP2C2-213ENST00000568160 PBRM1Q86U86 1689 aa17.66■□□□□ 0.42
ATP2C2-213ENST00000568160 WRNQ14191 1432 aaPredicted RBP eCLIP17.65■□□□□ 0.42
ATP2C2-213ENST00000568160 SYNJ2O15056 1496 aa17.65■□□□□ 0.42
ATP2C2-213ENST00000568160 ARAP1Q96P48 1450 aa17.63■□□□□ 0.41
ATP2C2-213ENST00000568160 TRHP20396 242 aaPredicted RBP17.55■□□□□ 0.4
ATP2C2-213ENST00000568160 ADAMTS12P58397 1594 aa17.53■□□□□ 0.4
ATP2C2-213ENST00000568160 GRIN2AQ12879 1464 aa17.51■□□□□ 0.39
ATP2C2-213ENST00000568160 CEP170Q5SW79 1584 aa17.47■□□□□ 0.39
ATP2C2-213ENST00000568160 ERICH3Q5RHP9 1530 aa17.47■□□□□ 0.39
ATP2C2-213ENST00000568160 NUP160Q12769 1436 aa17.47■□□□□ 0.39
ATP2C2-213ENST00000568160 FHAD1B1AJZ9 1412 aa17.46■□□□□ 0.39
ATP2C2-213ENST00000568160 ERCC6L2Q5T890 1561 aa17.43■□□□□ 0.38
ATP2C2-213ENST00000568160 SHROOM2Q13796 1616 aa17.38■□□□□ 0.37
ATP2C2-213ENST00000568160 IGF1RP08069 1367 aa17.31■□□□□ 0.36
ATP2C2-213ENST00000568160 RUSC2Q8N2Y8 1516 aa17.29■□□□□ 0.36
ATP2C2-213ENST00000568160 KIF27Q86VH2 1401 aa17.28■□□□□ 0.36
ATP2C2-213ENST00000568160 PRG4Q92954 1404 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms