RNA–Protein interactions for RNA: ENST00000568119.5

SCAMP5-217, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 4

Gene SCAMP5, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-217ENST00000568119 NISCHQ9Y2I1 1504 aa48.37■■■■■ 5.33
SCAMP5-217ENST00000568119 CCDC180Q9P1Z9 1646 aa43.03■■■■■ 4.48
SCAMP5-217ENST00000568119 ABCC9O60706 1549 aa42.23■■■■■ 4.35
SCAMP5-217ENST00000568119 DCAF8L2P0C7V8 631 aa40.57■■■■■ 4.09
SCAMP5-217ENST00000568119 RB1CC1Q8TDY2 1594 aa40.57■■■■■ 4.08
SCAMP5-217ENST00000568119 NACADO15069 1562 aa40.48■■■■■ 4.07
SCAMP5-217ENST00000568119 ZCCHC6Q5VYS8 1495 aaKnown RBP40.26■■■■■ 4.03
SCAMP5-217ENST00000568119 MYO15BQ96JP2 1530 aa40.18■■■■■ 4.02
SCAMP5-217ENST00000568119 DCAF1Q9Y4B6 1507 aa40■■■■□ 3.99
SCAMP5-217ENST00000568119 UNC13AQ9UPW8 1703 aa39.66■■■■□ 3.94
SCAMP5-217ENST00000568119 PABPN1Q86U42 306 aaKnown RBP eCLIP39.48■■■■□ 3.91
SCAMP5-217ENST00000568119 BICRAQ9NZM4 1560 aa39.33■■■■□ 3.89
SCAMP5-217ENST00000568119 SCRIBQ14160 1630 aa39.29■■■■□ 3.88
SCAMP5-217ENST00000568119 SHROOM4Q9ULL8 1493 aa38.86■■■■□ 3.81
SCAMP5-217ENST00000568119 DNAJC5BQ9UF47 199 aa38.84■■■■□ 3.81
SCAMP5-217ENST00000568119 EIF4G1Q04637 1599 aaKnown RBP38.3■■■■□ 3.72
SCAMP5-217ENST00000568119 CC2D2AQ9P2K1 1620 aa38.18■■■■□ 3.7
SCAMP5-217ENST00000568119 CECR2Q9BXF3 1484 aa37.94■■■■□ 3.66
SCAMP5-217ENST00000568119 SMARCA4P51532 1647 aa37.55■■■■□ 3.6
SCAMP5-217ENST00000568119 BAZ1AQ9NRL2 1556 aaPredicted RBP37.5■■■■□ 3.59
SCAMP5-217ENST00000568119 ATAD2BQ9ULI0 1458 aa37.37■■■■□ 3.57
SCAMP5-217ENST00000568119 NCAPD3P42695 1498 aa37.36■■■■□ 3.57
SCAMP5-217ENST00000568119 SMARCA2P51531 1590 aa37.33■■■■□ 3.57
SCAMP5-217ENST00000568119 MROH2BQ7Z745 1585 aa37.29■■■■□ 3.56
SCAMP5-217ENST00000568119 PEG3Q9GZU2 1588 aa37.17■■■■□ 3.54
SCAMP5-217ENST00000568119 HMGXB3Q12766 1538 aa37.15■■■■□ 3.54
SCAMP5-217ENST00000568119 BAZ1BQ9UIG0 1483 aaKnown RBP37.07■■■■□ 3.53
SCAMP5-217ENST00000568119 WIZO95785 1651 aa36.9■■■■□ 3.5
SCAMP5-217ENST00000568119 RSF1Q96T23 1441 aaPredicted RBP36.83■■■■□ 3.49
SCAMP5-217ENST00000568119 NESP48681 1621 aa36.51■■■■□ 3.43
SCAMP5-217ENST00000568119 TOP2AP11388 1531 aaKnown RBP36.47■■■■□ 3.43
SCAMP5-217ENST00000568119 ERCC6Q03468 1493 aa36.41■■■■□ 3.42
SCAMP5-217ENST00000568119 LAMC3Q9Y6N6 1575 aa36.4■■■■□ 3.42
SCAMP5-217ENST00000568119 CADPSQ9ULU8 1353 aa36.28■■■■□ 3.4
SCAMP5-217ENST00000568119 PDS5BQ9NTI5 1447 aa36.17■■■■□ 3.38
SCAMP5-217ENST00000568119 DNAJC5Q9H3Z4 198 aa36.1■■■■□ 3.37
SCAMP5-217ENST00000568119 KIF21AQ7Z4S6 1674 aa36.08■■■■□ 3.37
SCAMP5-217ENST00000568119 CCDC88BA6NC98 1476 aa36.07■■■■□ 3.37
SCAMP5-217ENST00000568119 CFTRP13569 1480 aa36.04■■■■□ 3.36
SCAMP5-217ENST00000568119 CUX2O14529 1486 aa36.02■■■■□ 3.36
SCAMP5-217ENST00000568119 THOC2Q8NI27 1593 aaKnown RBP35.94■■■■□ 3.34
SCAMP5-217ENST00000568119 SUPT5HO00267 1087 aaKnown RBP35.92■■■■□ 3.34
SCAMP5-217ENST00000568119 FANCD2Q9BXW9 1451 aa35.86■■■■□ 3.33
SCAMP5-217ENST00000568119 CEP164Q9UPV0 1460 aa35.83■■■■□ 3.33
SCAMP5-217ENST00000568119 MRC2Q9UBG0 1479 aa35.79■■■■□ 3.32
SCAMP5-217ENST00000568119 PRDM2Q13029 1718 aa35.77■■■■□ 3.32
SCAMP5-217ENST00000568119 WDR62O43379 1518 aa35.65■■■■□ 3.3
SCAMP5-217ENST00000568119 URB2Q14146 1524 aaKnown RBP35.5■■■■□ 3.27
SCAMP5-217ENST00000568119 ABCC8Q09428 1581 aa35.28■■■■□ 3.24
SCAMP5-217ENST00000568119 TOPBP1Q92547 1522 aa35.27■■■■□ 3.24
SCAMP5-217ENST00000568119 DNMBPQ6XZF7 1577 aa35.23■■■■□ 3.23
SCAMP5-217ENST00000568119 IFT140Q96RY7 1462 aa35.08■■■■□ 3.21
SCAMP5-217ENST00000568119 CUX1P39880 1505 aa34.98■■■■□ 3.19
SCAMP5-217ENST00000568119 POLA1P09884 1462 aaPredicted RBP34.97■■■■□ 3.19
SCAMP5-217ENST00000568119 ZNF608Q9ULD9 1512 aaPredicted RBP34.93■■■■□ 3.18
SCAMP5-217ENST00000568119 TARBP1Q13395 1621 aaKnown RBP34.9■■■■□ 3.18
SCAMP5-217ENST00000568119 FGD5Q6ZNL6 1462 aa34.88■■■■□ 3.17
SCAMP5-217ENST00000568119 SOGA1O94964 1423 aa34.86■■■■□ 3.17
SCAMP5-217ENST00000568119 RAD54L2Q9Y4B4 1467 aa34.84■■■■□ 3.17
SCAMP5-217ENST00000568119 EIF4G3O43432 1585 aaKnown RBP34.78■■■■□ 3.16
SCAMP5-217ENST00000568119 AQRO60306 1485 aaKnown RBP eCLIP34.75■■■■□ 3.15
SCAMP5-217ENST00000568119 WRNQ14191 1432 aaPredicted RBP eCLIP34.73■■■■□ 3.15
SCAMP5-217ENST00000568119 TDRD9Q8NDG6 1382 aaKnown RBP34.67■■■■□ 3.14
SCAMP5-217ENST00000568119 TOP2BQ02880 1626 aa34.66■■■■□ 3.14
SCAMP5-217ENST00000568119 BIVM-ERCC5R4GMW8 1640 aa34.66■■■■□ 3.14
SCAMP5-217ENST00000568119 SYNJ1O43426 1573 aa34.65■■■■□ 3.14
SCAMP5-217ENST00000568119 WDR97A6NE52 1622 aa34.59■■■■□ 3.13
SCAMP5-217ENST00000568119 OSCARQ8IYS5 282 aa34.58■■■■□ 3.13
SCAMP5-217ENST00000568119 ABCA10Q8WWZ4 1543 aa34.53■■■■□ 3.12
SCAMP5-217ENST00000568119 GAPVD1Q14C86 1478 aa34.45■■■■□ 3.1
SCAMP5-217ENST00000568119 GRIN2BQ13224 1484 aa34.44■■■■□ 3.1
SCAMP5-217ENST00000568119 SNAPC4Q5SXM2 1469 aa34.4■■■■□ 3.1
SCAMP5-217ENST00000568119 FBLN2P98095 1184 aa34.4■■■■□ 3.1
SCAMP5-217ENST00000568119 ABCA5Q8WWZ7 1642 aa34.39■■■■□ 3.1
SCAMP5-217ENST00000568119 CHD1O14646 1710 aa34.38■■■■□ 3.09
SCAMP5-217ENST00000568119 PBRM1Q86U86 1689 aa34.38■■■■□ 3.09
SCAMP5-217ENST00000568119 MAGI1Q96QZ7 1491 aaPredicted RBP34.34■■■■□ 3.09
SCAMP5-217ENST00000568119 CHMP7Q8WUX9 453 aaPredicted RBP34.27■■■■□ 3.08
SCAMP5-217ENST00000568119 SYNJ2O15056 1496 aa34.22■■■■□ 3.07
SCAMP5-217ENST00000568119 ERICH3Q5RHP9 1530 aa34.12■■■■□ 3.05
SCAMP5-217ENST00000568119 ADAMTS12P58397 1594 aa34.06■■■■□ 3.04
SCAMP5-217ENST00000568119 FHAD1B1AJZ9 1412 aa34.04■■■■□ 3.04
SCAMP5-217ENST00000568119 TRIM41Q8WV44 630 aa34.03■■■■□ 3.04
SCAMP5-217ENST00000568119 KIF27Q86VH2 1401 aa34.03■■■■□ 3.04
SCAMP5-217ENST00000568119 RIMBP3CA6NJZ7 1639 aa33.99■■■■□ 3.03
SCAMP5-217ENST00000568119 RIMBP3BA6NNM3 1639 aa33.99■■■■□ 3.03
SCAMP5-217ENST00000568119 RIMBP3Q9UFD9 1639 aa33.99■■■■□ 3.03
SCAMP5-217ENST00000568119 GRIN2AQ12879 1464 aa33.99■■■■□ 3.03
SCAMP5-217ENST00000568119 CLASP1Q7Z460 1538 aa33.97■■■■□ 3.03
SCAMP5-217ENST00000568119 ARHGEF11O15085 1522 aa33.96■■■■□ 3.03
SCAMP5-217ENST00000568119 IGF1RP08069 1367 aa33.9■■■■□ 3.02
SCAMP5-217ENST00000568119 NUP160Q12769 1436 aa33.83■■■■□ 3.01
SCAMP5-217ENST00000568119 CEP170Q5SW79 1584 aa33.82■■■■□ 3
SCAMP5-217ENST00000568119 CUL7Q14999 1698 aa33.8■■■■□ 3
SCAMP5-217ENST00000568119 CYB5RLQ6IPT4 315 aa33.72■■■□□ 2.99
SCAMP5-217ENST00000568119 CARMIL1Q5VZK9 1371 aa33.72■■■□□ 2.99
SCAMP5-217ENST00000568119 RUSC2Q8N2Y8 1516 aa33.7■■■□□ 2.99
SCAMP5-217ENST00000568119 ARAP1Q96P48 1450 aa33.68■■■□□ 2.98
SCAMP5-217ENST00000568119 SHROOM2Q13796 1616 aa33.58■■■□□ 2.97
SCAMP5-217ENST00000568119 JPH4Q96JJ6 628 aa33.55■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms