RNA–Protein interactions for RNA: ENST00000568059.1

NEIL1-218, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 4

Gene NEIL1, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-218ENST00000568059 NISCHQ9Y2I1 1504 aa39.76■■■■□ 3.96
NEIL1-218ENST00000568059 CCDC180Q9P1Z9 1646 aa35.6■■■■□ 3.29
NEIL1-218ENST00000568059 ABCC9O60706 1549 aa35.03■■■■□ 3.2
NEIL1-218ENST00000568059 RB1CC1Q8TDY2 1594 aa33.61■■■□□ 2.97
NEIL1-218ENST00000568059 NACADO15069 1562 aa33.47■■■□□ 2.95
NEIL1-218ENST00000568059 DCAF8L2P0C7V8 631 aa33.26■■■□□ 2.91
NEIL1-218ENST00000568059 MYO15BQ96JP2 1530 aa33.15■■■□□ 2.9
NEIL1-218ENST00000568059 ZCCHC6Q5VYS8 1495 aaKnown RBP33.1■■■□□ 2.89
NEIL1-218ENST00000568059 DCAF1Q9Y4B6 1507 aa32.9■■■□□ 2.86
NEIL1-218ENST00000568059 UNC13AQ9UPW8 1703 aa32.88■■■□□ 2.85
NEIL1-218ENST00000568059 PABPN1Q86U42 306 aaKnown RBP eCLIP32.59■■■□□ 2.81
NEIL1-218ENST00000568059 BICRAQ9NZM4 1560 aa32.56■■■□□ 2.8
NEIL1-218ENST00000568059 SCRIBQ14160 1630 aa32.44■■■□□ 2.78
NEIL1-218ENST00000568059 DNAJC5BQ9UF47 199 aa32.28■■■□□ 2.76
NEIL1-218ENST00000568059 SHROOM4Q9ULL8 1493 aa32.24■■■□□ 2.75
NEIL1-218ENST00000568059 EIF4G1Q04637 1599 aaKnown RBP31.76■■■□□ 2.67
NEIL1-218ENST00000568059 CC2D2AQ9P2K1 1620 aa31.71■■■□□ 2.67
NEIL1-218ENST00000568059 CECR2Q9BXF3 1484 aa31.51■■■□□ 2.63
NEIL1-218ENST00000568059 SMARCA4P51532 1647 aa30.98■■■□□ 2.55
NEIL1-218ENST00000568059 BAZ1AQ9NRL2 1556 aaPredicted RBP30.88■■■□□ 2.53
NEIL1-218ENST00000568059 NCAPD3P42695 1498 aa30.82■■■□□ 2.53
NEIL1-218ENST00000568059 SMARCA2P51531 1590 aa30.82■■■□□ 2.52
NEIL1-218ENST00000568059 ATAD2BQ9ULI0 1458 aa30.82■■■□□ 2.52
NEIL1-218ENST00000568059 HMGXB3Q12766 1538 aa30.74■■■□□ 2.51
NEIL1-218ENST00000568059 PEG3Q9GZU2 1588 aa30.65■■■□□ 2.5
NEIL1-218ENST00000568059 MROH2BQ7Z745 1585 aa30.64■■■□□ 2.5
NEIL1-218ENST00000568059 BAZ1BQ9UIG0 1483 aaKnown RBP30.6■■■□□ 2.49
NEIL1-218ENST00000568059 WIZO95785 1651 aa30.33■■■□□ 2.45
NEIL1-218ENST00000568059 ERCC6Q03468 1493 aa30.25■■■□□ 2.43
NEIL1-218ENST00000568059 NESP48681 1621 aa30.22■■■□□ 2.43
NEIL1-218ENST00000568059 LAMC3Q9Y6N6 1575 aa30.15■■■□□ 2.42
NEIL1-218ENST00000568059 RSF1Q96T23 1441 aaPredicted RBP30.13■■■□□ 2.41
NEIL1-218ENST00000568059 CUX2O14529 1486 aa30.04■■■□□ 2.4
NEIL1-218ENST00000568059 TOP2AP11388 1531 aaKnown RBP30.01■■■□□ 2.39
NEIL1-218ENST00000568059 KIF21AQ7Z4S6 1674 aa29.93■■■□□ 2.38
NEIL1-218ENST00000568059 CADPSQ9ULU8 1353 aa29.9■■■□□ 2.38
NEIL1-218ENST00000568059 THOC2Q8NI27 1593 aaKnown RBP29.9■■■□□ 2.38
NEIL1-218ENST00000568059 PDS5BQ9NTI5 1447 aa29.89■■■□□ 2.38
NEIL1-218ENST00000568059 CFTRP13569 1480 aa29.69■■■□□ 2.34
NEIL1-218ENST00000568059 MRC2Q9UBG0 1479 aa29.65■■■□□ 2.34
NEIL1-218ENST00000568059 CEP164Q9UPV0 1460 aa29.64■■■□□ 2.34
NEIL1-218ENST00000568059 FANCD2Q9BXW9 1451 aa29.61■■■□□ 2.33
NEIL1-218ENST00000568059 PRDM2Q13029 1718 aa29.59■■■□□ 2.33
NEIL1-218ENST00000568059 WDR62O43379 1518 aa29.58■■■□□ 2.33
NEIL1-218ENST00000568059 CCDC88BA6NC98 1476 aa29.57■■■□□ 2.32
NEIL1-218ENST00000568059 DNAJC5Q9H3Z4 198 aa29.34■■■□□ 2.29
NEIL1-218ENST00000568059 URB2Q14146 1524 aaKnown RBP29.33■■■□□ 2.29
NEIL1-218ENST00000568059 TOPBP1Q92547 1522 aa29.11■■■□□ 2.25
NEIL1-218ENST00000568059 SUPT5HO00267 1087 aaKnown RBP29.11■■■□□ 2.25
NEIL1-218ENST00000568059 DNMBPQ6XZF7 1577 aa29.09■■■□□ 2.25
NEIL1-218ENST00000568059 ABCC8Q09428 1581 aa29.08■■■□□ 2.25
NEIL1-218ENST00000568059 IFT140Q96RY7 1462 aa29■■■□□ 2.23
NEIL1-218ENST00000568059 ZNF608Q9ULD9 1512 aaPredicted RBP28.88■■■□□ 2.21
NEIL1-218ENST00000568059 EIF4G3O43432 1585 aaKnown RBP28.85■■■□□ 2.21
NEIL1-218ENST00000568059 POLA1P09884 1462 aaPredicted RBP28.85■■■□□ 2.21
NEIL1-218ENST00000568059 TARBP1Q13395 1621 aaKnown RBP28.83■■■□□ 2.21
NEIL1-218ENST00000568059 CUX1P39880 1505 aa28.78■■■□□ 2.2
NEIL1-218ENST00000568059 FGD5Q6ZNL6 1462 aa28.74■■■□□ 2.19
NEIL1-218ENST00000568059 RAD54L2Q9Y4B4 1467 aa28.69■■■□□ 2.18
NEIL1-218ENST00000568059 SOGA1O94964 1423 aa28.67■■■□□ 2.18
NEIL1-218ENST00000568059 AQRO60306 1485 aaKnown RBP eCLIP28.65■■■□□ 2.18
NEIL1-218ENST00000568059 WDR97A6NE52 1622 aa28.63■■■□□ 2.17
NEIL1-218ENST00000568059 OSCARQ8IYS5 282 aa28.62■■■□□ 2.17
NEIL1-218ENST00000568059 CHD1O14646 1710 aa28.55■■■□□ 2.16
NEIL1-218ENST00000568059 TDRD9Q8NDG6 1382 aaKnown RBP28.53■■■□□ 2.16
NEIL1-218ENST00000568059 BIVM-ERCC5R4GMW8 1640 aa28.51■■■□□ 2.15
NEIL1-218ENST00000568059 TOP2BQ02880 1626 aa28.47■■■□□ 2.15
NEIL1-218ENST00000568059 WRNQ14191 1432 aaPredicted RBP eCLIP28.47■■■□□ 2.15
NEIL1-218ENST00000568059 SYNJ1O43426 1573 aa28.45■■■□□ 2.15
NEIL1-218ENST00000568059 SNAPC4Q5SXM2 1469 aa28.45■■■□□ 2.14
NEIL1-218ENST00000568059 PBRM1Q86U86 1689 aa28.44■■■□□ 2.14
NEIL1-218ENST00000568059 ABCA10Q8WWZ4 1543 aa28.43■■■□□ 2.14
NEIL1-218ENST00000568059 GRIN2BQ13224 1484 aa28.41■■■□□ 2.14
NEIL1-218ENST00000568059 ABCA5Q8WWZ7 1642 aa28.4■■■□□ 2.14
NEIL1-218ENST00000568059 MAGI1Q96QZ7 1491 aaPredicted RBP28.4■■■□□ 2.14
NEIL1-218ENST00000568059 GAPVD1Q14C86 1478 aa28.37■■■□□ 2.13
NEIL1-218ENST00000568059 FBLN2P98095 1184 aa28.35■■■□□ 2.13
NEIL1-218ENST00000568059 RIMBP3CA6NJZ7 1639 aa28.33■■■□□ 2.13
NEIL1-218ENST00000568059 RIMBP3BA6NNM3 1639 aa28.33■■■□□ 2.13
NEIL1-218ENST00000568059 RIMBP3Q9UFD9 1639 aa28.33■■■□□ 2.13
NEIL1-218ENST00000568059 TRIM41Q8WV44 630 aa28.3■■■□□ 2.12
NEIL1-218ENST00000568059 ARHGEF11O15085 1522 aa28.28■■■□□ 2.12
NEIL1-218ENST00000568059 SYNJ2O15056 1496 aa28.27■■■□□ 2.12
NEIL1-218ENST00000568059 CHMP7Q8WUX9 453 aaPredicted RBP28.22■■■□□ 2.11
NEIL1-218ENST00000568059 CLASP1Q7Z460 1538 aa28.18■■■□□ 2.1
NEIL1-218ENST00000568059 ADAMTS12P58397 1594 aa28.17■■■□□ 2.1
NEIL1-218ENST00000568059 ERICH3Q5RHP9 1530 aa28.11■■■□□ 2.09
NEIL1-218ENST00000568059 GRIN2AQ12879 1464 aa28.07■■■□□ 2.08
NEIL1-218ENST00000568059 FHAD1B1AJZ9 1412 aa28.02■■■□□ 2.08
NEIL1-218ENST00000568059 ARAP1Q96P48 1450 aa28.02■■■□□ 2.08
NEIL1-218ENST00000568059 CEP170Q5SW79 1584 aa27.96■■■□□ 2.07
NEIL1-218ENST00000568059 NUP160Q12769 1436 aa27.93■■■□□ 2.06
NEIL1-218ENST00000568059 CYB5RLQ6IPT4 315 aa27.92■■■□□ 2.06
NEIL1-218ENST00000568059 KIF27Q86VH2 1401 aa27.89■■■□□ 2.06
NEIL1-218ENST00000568059 CUL7Q14999 1698 aa27.85■■■□□ 2.05
NEIL1-218ENST00000568059 SHROOM2Q13796 1616 aa27.81■■■□□ 2.04
NEIL1-218ENST00000568059 RUSC2Q8N2Y8 1516 aa27.77■■■□□ 2.04
NEIL1-218ENST00000568059 ERCC6L2Q5T890 1561 aa27.75■■■□□ 2.03
NEIL1-218ENST00000568059 IGF1RP08069 1367 aa27.73■■■□□ 2.03
NEIL1-218ENST00000568059 CARMIL1Q5VZK9 1371 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms