RNA–Protein interactions for RNA: ENST00000568018.5

SCAMP5-215, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 4

Gene SCAMP5, Length 600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-215ENST00000568018 NISCHQ9Y2I1 1504 aa43.1■■■■■ 4.49
SCAMP5-215ENST00000568018 ABCC9O60706 1549 aa38.83■■■■□ 3.81
SCAMP5-215ENST00000568018 CCDC180Q9P1Z9 1646 aa38.71■■■■□ 3.79
SCAMP5-215ENST00000568018 RB1CC1Q8TDY2 1594 aa36.83■■■■□ 3.49
SCAMP5-215ENST00000568018 NACADO15069 1562 aa36.54■■■■□ 3.44
SCAMP5-215ENST00000568018 DNAJC5BQ9UF47 199 aa36.53■■■■□ 3.44
SCAMP5-215ENST00000568018 DCAF8L2P0C7V8 631 aa36.3■■■■□ 3.4
SCAMP5-215ENST00000568018 UNC13AQ9UPW8 1703 aa36.24■■■■□ 3.39
SCAMP5-215ENST00000568018 PABPN1Q86U42 306 aaKnown RBP eCLIP36.11■■■■□ 3.37
SCAMP5-215ENST00000568018 MYO15BQ96JP2 1530 aa35.98■■■■□ 3.35
SCAMP5-215ENST00000568018 BICRAQ9NZM4 1560 aa35.93■■■■□ 3.34
SCAMP5-215ENST00000568018 ZCCHC6Q5VYS8 1495 aaKnown RBP35.74■■■■□ 3.31
SCAMP5-215ENST00000568018 DCAF1Q9Y4B6 1507 aa35.53■■■■□ 3.28
SCAMP5-215ENST00000568018 SCRIBQ14160 1630 aa35.36■■■■□ 3.25
SCAMP5-215ENST00000568018 SHROOM4Q9ULL8 1493 aa35.19■■■■□ 3.22
SCAMP5-215ENST00000568018 CC2D2AQ9P2K1 1620 aa35.09■■■■□ 3.21
SCAMP5-215ENST00000568018 EIF4G1Q04637 1599 aaKnown RBP34.97■■■■□ 3.19
SCAMP5-215ENST00000568018 CECR2Q9BXF3 1484 aa34.92■■■■□ 3.18
SCAMP5-215ENST00000568018 NCAPD3P42695 1498 aa33.74■■■□□ 2.99
SCAMP5-215ENST00000568018 SMARCA4P51532 1647 aa33.69■■■□□ 2.98
SCAMP5-215ENST00000568018 ATAD2BQ9ULI0 1458 aa33.69■■■□□ 2.98
SCAMP5-215ENST00000568018 SMARCA2P51531 1590 aa33.53■■■□□ 2.96
SCAMP5-215ENST00000568018 HMGXB3Q12766 1538 aa33.53■■■□□ 2.96
SCAMP5-215ENST00000568018 ERCC6Q03468 1493 aa33.43■■■□□ 2.94
SCAMP5-215ENST00000568018 DNAJC5Q9H3Z4 198 aa33.42■■■□□ 2.94
SCAMP5-215ENST00000568018 BAZ1AQ9NRL2 1556 aaPredicted RBP33.42■■■□□ 2.94
SCAMP5-215ENST00000568018 NESP48681 1621 aa33.4■■■□□ 2.94
SCAMP5-215ENST00000568018 CUX2O14529 1486 aa33.38■■■□□ 2.93
SCAMP5-215ENST00000568018 BAZ1BQ9UIG0 1483 aaKnown RBP33.32■■■□□ 2.92
SCAMP5-215ENST00000568018 PEG3Q9GZU2 1588 aa33.31■■■□□ 2.92
SCAMP5-215ENST00000568018 MROH2BQ7Z745 1585 aa33.29■■■□□ 2.92
SCAMP5-215ENST00000568018 THOC2Q8NI27 1593 aaKnown RBP33.08■■■□□ 2.89
SCAMP5-215ENST00000568018 LAMC3Q9Y6N6 1575 aa33.01■■■□□ 2.88
SCAMP5-215ENST00000568018 KIF21AQ7Z4S6 1674 aa33■■■□□ 2.87
SCAMP5-215ENST00000568018 WIZO95785 1651 aa32.91■■■□□ 2.86
SCAMP5-215ENST00000568018 PDS5BQ9NTI5 1447 aa32.74■■■□□ 2.83
SCAMP5-215ENST00000568018 CADPSQ9ULU8 1353 aa32.7■■■□□ 2.82
SCAMP5-215ENST00000568018 MRC2Q9UBG0 1479 aa32.56■■■□□ 2.8
SCAMP5-215ENST00000568018 WDR62O43379 1518 aa32.52■■■□□ 2.8
SCAMP5-215ENST00000568018 RSF1Q96T23 1441 aaPredicted RBP32.51■■■□□ 2.79
SCAMP5-215ENST00000568018 CEP164Q9UPV0 1460 aa32.41■■■□□ 2.78
SCAMP5-215ENST00000568018 TOP2AP11388 1531 aaKnown RBP32.41■■■□□ 2.78
SCAMP5-215ENST00000568018 FANCD2Q9BXW9 1451 aa32.39■■■□□ 2.78
SCAMP5-215ENST00000568018 CFTRP13569 1480 aa32.35■■■□□ 2.77
SCAMP5-215ENST00000568018 URB2Q14146 1524 aaKnown RBP32.21■■■□□ 2.75
SCAMP5-215ENST00000568018 PRDM2Q13029 1718 aa32.14■■■□□ 2.74
SCAMP5-215ENST00000568018 CCDC88BA6NC98 1476 aa32.03■■■□□ 2.72
SCAMP5-215ENST00000568018 TRIM41Q8WV44 630 aa31.98■■■□□ 2.71
SCAMP5-215ENST00000568018 ZNF608Q9ULD9 1512 aaPredicted RBP31.83■■■□□ 2.69
SCAMP5-215ENST00000568018 TOPBP1Q92547 1522 aa31.8■■■□□ 2.68
SCAMP5-215ENST00000568018 OSCARQ8IYS5 282 aa31.75■■■□□ 2.67
SCAMP5-215ENST00000568018 IFT140Q96RY7 1462 aa31.73■■■□□ 2.67
SCAMP5-215ENST00000568018 DNMBPQ6XZF7 1577 aa31.66■■■□□ 2.66
SCAMP5-215ENST00000568018 EIF4G3O43432 1585 aaKnown RBP31.65■■■□□ 2.66
SCAMP5-215ENST00000568018 RIMBP3CA6NJZ7 1639 aa31.57■■■□□ 2.64
SCAMP5-215ENST00000568018 RIMBP3BA6NNM3 1639 aa31.57■■■□□ 2.64
SCAMP5-215ENST00000568018 TARBP1Q13395 1621 aaKnown RBP31.57■■■□□ 2.64
SCAMP5-215ENST00000568018 RIMBP3Q9UFD9 1639 aa31.57■■■□□ 2.64
SCAMP5-215ENST00000568018 ABCC8Q09428 1581 aa31.55■■■□□ 2.64
SCAMP5-215ENST00000568018 AQRO60306 1485 aaKnown RBP eCLIP31.47■■■□□ 2.63
SCAMP5-215ENST00000568018 POLA1P09884 1462 aaPredicted RBP31.47■■■□□ 2.63
SCAMP5-215ENST00000568018 CHD1O14646 1710 aa31.47■■■□□ 2.63
SCAMP5-215ENST00000568018 ARHGEF11O15085 1522 aa31.43■■■□□ 2.62
SCAMP5-215ENST00000568018 RAD54L2Q9Y4B4 1467 aa31.4■■■□□ 2.62
SCAMP5-215ENST00000568018 CUX1P39880 1505 aa31.28■■■□□ 2.6
SCAMP5-215ENST00000568018 FGD5Q6ZNL6 1462 aa31.27■■■□□ 2.6
SCAMP5-215ENST00000568018 TDRD9Q8NDG6 1382 aaKnown RBP31.25■■■□□ 2.59
SCAMP5-215ENST00000568018 SOGA1O94964 1423 aa31.24■■■□□ 2.59
SCAMP5-215ENST00000568018 FBLN2P98095 1184 aa31.17■■■□□ 2.58
SCAMP5-215ENST00000568018 SNAPC4Q5SXM2 1469 aa31.16■■■□□ 2.58
SCAMP5-215ENST00000568018 ARAP1Q96P48 1450 aa31.14■■■□□ 2.58
SCAMP5-215ENST00000568018 WDR97A6NE52 1622 aa31.14■■■□□ 2.58
SCAMP5-215ENST00000568018 CYB5RLQ6IPT4 315 aa31.1■■■□□ 2.57
SCAMP5-215ENST00000568018 CLASP1Q7Z460 1538 aa31.05■■■□□ 2.56
SCAMP5-215ENST00000568018 PBRM1Q86U86 1689 aa31.01■■■□□ 2.55
SCAMP5-215ENST00000568018 MAGI1Q96QZ7 1491 aaPredicted RBP30.99■■■□□ 2.55
SCAMP5-215ENST00000568018 GRIN2BQ13224 1484 aa30.98■■■□□ 2.55
SCAMP5-215ENST00000568018 SUPT5HO00267 1087 aaKnown RBP30.96■■■□□ 2.55
SCAMP5-215ENST00000568018 SYNJ1O43426 1573 aa30.92■■■□□ 2.54
SCAMP5-215ENST00000568018 ABCA5Q8WWZ7 1642 aa30.91■■■□□ 2.54
SCAMP5-215ENST00000568018 SYNJ2O15056 1496 aa30.9■■■□□ 2.54
SCAMP5-215ENST00000568018 GAPVD1Q14C86 1478 aa30.89■■■□□ 2.53
SCAMP5-215ENST00000568018 CHMP7Q8WUX9 453 aaPredicted RBP30.88■■■□□ 2.53
SCAMP5-215ENST00000568018 ABCA10Q8WWZ4 1543 aa30.86■■■□□ 2.53
SCAMP5-215ENST00000568018 BIVM-ERCC5R4GMW8 1640 aa30.74■■■□□ 2.51
SCAMP5-215ENST00000568018 TRHP20396 242 aaPredicted RBP30.73■■■□□ 2.51
SCAMP5-215ENST00000568018 TOP2BQ02880 1626 aa30.7■■■□□ 2.51
SCAMP5-215ENST00000568018 ADAMTS12P58397 1594 aa30.68■■■□□ 2.5
SCAMP5-215ENST00000568018 ERCC6L2Q5T890 1561 aa30.66■■■□□ 2.5
SCAMP5-215ENST00000568018 WRNQ14191 1432 aaPredicted RBP eCLIP30.64■■■□□ 2.5
SCAMP5-215ENST00000568018 GRIN2AQ12879 1464 aa30.63■■■□□ 2.49
SCAMP5-215ENST00000568018 CEP170Q5SW79 1584 aa30.62■■■□□ 2.49
SCAMP5-215ENST00000568018 NUP160Q12769 1436 aa30.54■■■□□ 2.48
SCAMP5-215ENST00000568018 SHROOM2Q13796 1616 aa30.47■■■□□ 2.47
SCAMP5-215ENST00000568018 FHAD1B1AJZ9 1412 aa30.46■■■□□ 2.47
SCAMP5-215ENST00000568018 ERICH3Q5RHP9 1530 aa30.45■■■□□ 2.47
SCAMP5-215ENST00000568018 RUSC2Q8N2Y8 1516 aa30.27■■■□□ 2.44
SCAMP5-215ENST00000568018 PRG4Q92954 1404 aaPredicted RBP30.22■■■□□ 2.43
SCAMP5-215ENST00000568018 KIF13AQ9H1H9 1805 aa30.16■■■□□ 2.42
SCAMP5-215ENST00000568018 JPH4Q96JJ6 628 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms