RNA–Protein interactions for RNA: ENST00000567959.5

NEIL1-217, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 801 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-217ENST00000567959 NISCHQ9Y2I1 1504 aa31.79■■■□□ 2.68
NEIL1-217ENST00000567959 CCDC180Q9P1Z9 1646 aa28.25■■■□□ 2.11
NEIL1-217ENST00000567959 ABCC9O60706 1549 aa27.89■■■□□ 2.06
NEIL1-217ENST00000567959 DCAF8L2P0C7V8 631 aa26.74■■□□□ 1.87
NEIL1-217ENST00000567959 RB1CC1Q8TDY2 1594 aa26.68■■□□□ 1.86
NEIL1-217ENST00000567959 NACADO15069 1562 aa26.61■■□□□ 1.85
NEIL1-217ENST00000567959 ZCCHC6Q5VYS8 1495 aaKnown RBP26.45■■□□□ 1.82
NEIL1-217ENST00000567959 MYO15BQ96JP2 1530 aa26.36■■□□□ 1.81
NEIL1-217ENST00000567959 DCAF1Q9Y4B6 1507 aa26.23■■□□□ 1.79
NEIL1-217ENST00000567959 PABPN1Q86U42 306 aaKnown RBP eCLIP26.09■■□□□ 1.77
NEIL1-217ENST00000567959 UNC13AQ9UPW8 1703 aa26.06■■□□□ 1.76
NEIL1-217ENST00000567959 BICRAQ9NZM4 1560 aa25.9■■□□□ 1.74
NEIL1-217ENST00000567959 SCRIBQ14160 1630 aa25.88■■□□□ 1.73
NEIL1-217ENST00000567959 DNAJC5BQ9UF47 199 aa25.72■■□□□ 1.71
NEIL1-217ENST00000567959 SHROOM4Q9ULL8 1493 aa25.53■■□□□ 1.68
NEIL1-217ENST00000567959 EIF4G1Q04637 1599 aaKnown RBP25.24■■□□□ 1.63
NEIL1-217ENST00000567959 CC2D2AQ9P2K1 1620 aa25.17■■□□□ 1.62
NEIL1-217ENST00000567959 CECR2Q9BXF3 1484 aa25.04■■□□□ 1.6
NEIL1-217ENST00000567959 SMARCA4P51532 1647 aa24.69■■□□□ 1.54
NEIL1-217ENST00000567959 BAZ1AQ9NRL2 1556 aaPredicted RBP24.63■■□□□ 1.53
NEIL1-217ENST00000567959 ATAD2BQ9ULI0 1458 aa24.6■■□□□ 1.53
NEIL1-217ENST00000567959 NCAPD3P42695 1498 aa24.58■■□□□ 1.52
NEIL1-217ENST00000567959 MROH2BQ7Z745 1585 aa24.54■■□□□ 1.52
NEIL1-217ENST00000567959 SMARCA2P51531 1590 aa24.53■■□□□ 1.52
NEIL1-217ENST00000567959 HMGXB3Q12766 1538 aa24.43■■□□□ 1.5
NEIL1-217ENST00000567959 BAZ1BQ9UIG0 1483 aaKnown RBP24.4■■□□□ 1.5
NEIL1-217ENST00000567959 PEG3Q9GZU2 1588 aa24.4■■□□□ 1.5
NEIL1-217ENST00000567959 WIZO95785 1651 aa24.26■■□□□ 1.47
NEIL1-217ENST00000567959 RSF1Q96T23 1441 aaPredicted RBP24.2■■□□□ 1.46
NEIL1-217ENST00000567959 NESP48681 1621 aa24.1■■□□□ 1.45
NEIL1-217ENST00000567959 ERCC6Q03468 1493 aa24.04■■□□□ 1.44
NEIL1-217ENST00000567959 TOP2AP11388 1531 aaKnown RBP23.96■■□□□ 1.43
NEIL1-217ENST00000567959 LAMC3Q9Y6N6 1575 aa23.93■■□□□ 1.42
NEIL1-217ENST00000567959 CADPSQ9ULU8 1353 aa23.88■■□□□ 1.41
NEIL1-217ENST00000567959 PDS5BQ9NTI5 1447 aa23.81■■□□□ 1.4
NEIL1-217ENST00000567959 CUX2O14529 1486 aa23.76■■□□□ 1.39
NEIL1-217ENST00000567959 KIF21AQ7Z4S6 1674 aa23.75■■□□□ 1.39
NEIL1-217ENST00000567959 CCDC88BA6NC98 1476 aa23.71■■□□□ 1.39
NEIL1-217ENST00000567959 THOC2Q8NI27 1593 aaKnown RBP23.69■■□□□ 1.38
NEIL1-217ENST00000567959 CFTRP13569 1480 aa23.69■■□□□ 1.38
NEIL1-217ENST00000567959 FANCD2Q9BXW9 1451 aa23.62■■□□□ 1.37
NEIL1-217ENST00000567959 CEP164Q9UPV0 1460 aa23.6■■□□□ 1.37
NEIL1-217ENST00000567959 SUPT5HO00267 1087 aaKnown RBP23.59■■□□□ 1.37
NEIL1-217ENST00000567959 MRC2Q9UBG0 1479 aa23.58■■□□□ 1.37
NEIL1-217ENST00000567959 WDR62O43379 1518 aa23.49■■□□□ 1.35
NEIL1-217ENST00000567959 PRDM2Q13029 1718 aa23.44■■□□□ 1.34
NEIL1-217ENST00000567959 URB2Q14146 1524 aaKnown RBP23.39■■□□□ 1.34
NEIL1-217ENST00000567959 TOPBP1Q92547 1522 aa23.22■■□□□ 1.31
NEIL1-217ENST00000567959 DNAJC5Q9H3Z4 198 aa23.2■■□□□ 1.3
NEIL1-217ENST00000567959 DNMBPQ6XZF7 1577 aa23.17■■□□□ 1.3
NEIL1-217ENST00000567959 ABCC8Q09428 1581 aa23.15■■□□□ 1.3
NEIL1-217ENST00000567959 IFT140Q96RY7 1462 aa23.09■■□□□ 1.29
NEIL1-217ENST00000567959 ZNF608Q9ULD9 1512 aaPredicted RBP23.05■■□□□ 1.28
NEIL1-217ENST00000567959 POLA1P09884 1462 aaPredicted RBP23.03■■□□□ 1.28
NEIL1-217ENST00000567959 CUX1P39880 1505 aa23.02■■□□□ 1.28
NEIL1-217ENST00000567959 RAD54L2Q9Y4B4 1467 aa22.97■■□□□ 1.27
NEIL1-217ENST00000567959 FGD5Q6ZNL6 1462 aa22.96■■□□□ 1.27
NEIL1-217ENST00000567959 TARBP1Q13395 1621 aaKnown RBP22.95■■□□□ 1.26
NEIL1-217ENST00000567959 SOGA1O94964 1423 aa22.93■■□□□ 1.26
NEIL1-217ENST00000567959 EIF4G3O43432 1585 aaKnown RBP22.91■■□□□ 1.26
NEIL1-217ENST00000567959 AQRO60306 1485 aaKnown RBP eCLIP22.91■■□□□ 1.26
NEIL1-217ENST00000567959 TDRD9Q8NDG6 1382 aaKnown RBP22.86■■□□□ 1.25
NEIL1-217ENST00000567959 WRNQ14191 1432 aaPredicted RBP eCLIP22.82■■□□□ 1.24
NEIL1-217ENST00000567959 OSCARQ8IYS5 282 aa22.79■■□□□ 1.24
NEIL1-217ENST00000567959 SYNJ1O43426 1573 aa22.78■■□□□ 1.24
NEIL1-217ENST00000567959 TOP2BQ02880 1626 aa22.75■■□□□ 1.23
NEIL1-217ENST00000567959 BIVM-ERCC5R4GMW8 1640 aa22.73■■□□□ 1.23
NEIL1-217ENST00000567959 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
NEIL1-217ENST00000567959 FBLN2P98095 1184 aa22.7■■□□□ 1.22
NEIL1-217ENST00000567959 ABCA10Q8WWZ4 1543 aa22.69■■□□□ 1.22
NEIL1-217ENST00000567959 SNAPC4Q5SXM2 1469 aa22.68■■□□□ 1.22
NEIL1-217ENST00000567959 GRIN2BQ13224 1484 aa22.66■■□□□ 1.22
NEIL1-217ENST00000567959 GAPVD1Q14C86 1478 aa22.66■■□□□ 1.22
NEIL1-217ENST00000567959 CHD1O14646 1710 aa22.63■■□□□ 1.21
NEIL1-217ENST00000567959 ABCA5Q8WWZ7 1642 aa22.61■■□□□ 1.21
NEIL1-217ENST00000567959 MAGI1Q96QZ7 1491 aaPredicted RBP22.59■■□□□ 1.21
NEIL1-217ENST00000567959 PBRM1Q86U86 1689 aa22.58■■□□□ 1.21
NEIL1-217ENST00000567959 CHMP7Q8WUX9 453 aaPredicted RBP22.57■■□□□ 1.2
NEIL1-217ENST00000567959 SYNJ2O15056 1496 aa22.53■■□□□ 1.2
NEIL1-217ENST00000567959 TRIM41Q8WV44 630 aa22.49■■□□□ 1.19
NEIL1-217ENST00000567959 RIMBP3CA6NJZ7 1639 aa22.43■■□□□ 1.18
NEIL1-217ENST00000567959 RIMBP3BA6NNM3 1639 aa22.43■■□□□ 1.18
NEIL1-217ENST00000567959 RIMBP3Q9UFD9 1639 aa22.43■■□□□ 1.18
NEIL1-217ENST00000567959 ADAMTS12P58397 1594 aa22.42■■□□□ 1.18
NEIL1-217ENST00000567959 ARHGEF11O15085 1522 aa22.42■■□□□ 1.18
NEIL1-217ENST00000567959 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
NEIL1-217ENST00000567959 CLASP1Q7Z460 1538 aa22.39■■□□□ 1.17
NEIL1-217ENST00000567959 FHAD1B1AJZ9 1412 aa22.39■■□□□ 1.17
NEIL1-217ENST00000567959 GRIN2AQ12879 1464 aa22.37■■□□□ 1.17
NEIL1-217ENST00000567959 KIF27Q86VH2 1401 aa22.34■■□□□ 1.17
NEIL1-217ENST00000567959 IGF1RP08069 1367 aa22.28■■□□□ 1.16
NEIL1-217ENST00000567959 CEP170Q5SW79 1584 aa22.28■■□□□ 1.16
NEIL1-217ENST00000567959 NUP160Q12769 1436 aa22.27■■□□□ 1.16
NEIL1-217ENST00000567959 CYB5RLQ6IPT4 315 aa22.27■■□□□ 1.16
NEIL1-217ENST00000567959 ARAP1Q96P48 1450 aa22.25■■□□□ 1.15
NEIL1-217ENST00000567959 CUL7Q14999 1698 aa22.17■■□□□ 1.14
NEIL1-217ENST00000567959 RUSC2Q8N2Y8 1516 aa22.16■■□□□ 1.14
NEIL1-217ENST00000567959 CARMIL1Q5VZK9 1371 aa22.15■■□□□ 1.14
NEIL1-217ENST00000567959 ERCC6L2Q5T890 1561 aa22.12■■□□□ 1.13
NEIL1-217ENST00000567959 CHIC1Q5VXU3 224 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms