RNA–Protein interactions for RNA: ENST00000567934.5

CDH11-213, Transcript of cadherin 11, humanhuman

TSL 2

Gene CDH11, Length 1,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-213ENST00000567934 NISCHQ9Y2I1 1504 aa37.94■■■■□ 3.66
CDH11-213ENST00000567934 CCDC180Q9P1Z9 1646 aa33.79■■■■□ 3
CDH11-213ENST00000567934 ABCC9O60706 1549 aa33.17■■■□□ 2.9
CDH11-213ENST00000567934 DCAF8L2P0C7V8 631 aa31.94■■■□□ 2.7
CDH11-213ENST00000567934 RB1CC1Q8TDY2 1594 aa31.86■■■□□ 2.69
CDH11-213ENST00000567934 NACADO15069 1562 aa31.77■■■□□ 2.68
CDH11-213ENST00000567934 ZCCHC6Q5VYS8 1495 aaKnown RBP31.56■■■□□ 2.64
CDH11-213ENST00000567934 MYO15BQ96JP2 1530 aa31.48■■■□□ 2.63
CDH11-213ENST00000567934 DCAF1Q9Y4B6 1507 aa31.34■■■□□ 2.61
CDH11-213ENST00000567934 UNC13AQ9UPW8 1703 aa31.19■■■□□ 2.58
CDH11-213ENST00000567934 PABPN1Q86U42 306 aaKnown RBP eCLIP31■■■□□ 2.55
CDH11-213ENST00000567934 SCRIBQ14160 1630 aa30.88■■■□□ 2.53
CDH11-213ENST00000567934 BICRAQ9NZM4 1560 aa30.83■■■□□ 2.53
CDH11-213ENST00000567934 SHROOM4Q9ULL8 1493 aa30.46■■■□□ 2.47
CDH11-213ENST00000567934 DNAJC5BQ9UF47 199 aa30.44■■■□□ 2.46
CDH11-213ENST00000567934 EIF4G1Q04637 1599 aaKnown RBP30.06■■■□□ 2.4
CDH11-213ENST00000567934 CC2D2AQ9P2K1 1620 aa29.99■■■□□ 2.39
CDH11-213ENST00000567934 CECR2Q9BXF3 1484 aa29.78■■■□□ 2.36
CDH11-213ENST00000567934 SMARCA4P51532 1647 aa29.49■■■□□ 2.31
CDH11-213ENST00000567934 BAZ1AQ9NRL2 1556 aaPredicted RBP29.44■■■□□ 2.3
CDH11-213ENST00000567934 SMARCA2P51531 1590 aa29.3■■■□□ 2.28
CDH11-213ENST00000567934 ATAD2BQ9ULI0 1458 aa29.3■■■□□ 2.28
CDH11-213ENST00000567934 NCAPD3P42695 1498 aa29.28■■■□□ 2.28
CDH11-213ENST00000567934 MROH2BQ7Z745 1585 aa29.25■■■□□ 2.27
CDH11-213ENST00000567934 HMGXB3Q12766 1538 aa29.14■■■□□ 2.25
CDH11-213ENST00000567934 PEG3Q9GZU2 1588 aa29.12■■■□□ 2.25
CDH11-213ENST00000567934 BAZ1BQ9UIG0 1483 aaKnown RBP29.11■■■□□ 2.25
CDH11-213ENST00000567934 WIZO95785 1651 aa28.99■■■□□ 2.23
CDH11-213ENST00000567934 RSF1Q96T23 1441 aaPredicted RBP28.87■■■□□ 2.21
CDH11-213ENST00000567934 NESP48681 1621 aa28.65■■■□□ 2.18
CDH11-213ENST00000567934 ERCC6Q03468 1493 aa28.63■■■□□ 2.17
CDH11-213ENST00000567934 TOP2AP11388 1531 aaKnown RBP28.63■■■□□ 2.17
CDH11-213ENST00000567934 LAMC3Q9Y6N6 1575 aa28.58■■■□□ 2.17
CDH11-213ENST00000567934 CADPSQ9ULU8 1353 aa28.46■■■□□ 2.15
CDH11-213ENST00000567934 PDS5BQ9NTI5 1447 aa28.4■■■□□ 2.14
CDH11-213ENST00000567934 KIF21AQ7Z4S6 1674 aa28.37■■■□□ 2.13
CDH11-213ENST00000567934 CCDC88BA6NC98 1476 aa28.3■■■□□ 2.12
CDH11-213ENST00000567934 SUPT5HO00267 1087 aaKnown RBP28.27■■■□□ 2.12
CDH11-213ENST00000567934 CUX2O14529 1486 aa28.26■■■□□ 2.11
CDH11-213ENST00000567934 CFTRP13569 1480 aa28.25■■■□□ 2.11
CDH11-213ENST00000567934 THOC2Q8NI27 1593 aaKnown RBP28.2■■■□□ 2.11
CDH11-213ENST00000567934 FANCD2Q9BXW9 1451 aa28.15■■■□□ 2.1
CDH11-213ENST00000567934 PRDM2Q13029 1718 aa28.15■■■□□ 2.1
CDH11-213ENST00000567934 CEP164Q9UPV0 1460 aa28.15■■■□□ 2.1
CDH11-213ENST00000567934 MRC2Q9UBG0 1479 aa28.09■■■□□ 2.09
CDH11-213ENST00000567934 WDR62O43379 1518 aa27.97■■■□□ 2.07
CDH11-213ENST00000567934 URB2Q14146 1524 aaKnown RBP27.85■■■□□ 2.05
CDH11-213ENST00000567934 ABCC8Q09428 1581 aa27.7■■■□□ 2.03
CDH11-213ENST00000567934 TOPBP1Q92547 1522 aa27.69■■■□□ 2.02
CDH11-213ENST00000567934 DNMBPQ6XZF7 1577 aa27.65■■■□□ 2.02
CDH11-213ENST00000567934 IFT140Q96RY7 1462 aa27.53■■■□□ 2
CDH11-213ENST00000567934 DNAJC5Q9H3Z4 198 aa27.49■■□□□ 1.99
CDH11-213ENST00000567934 CUX1P39880 1505 aa27.45■■□□□ 1.98
CDH11-213ENST00000567934 POLA1P09884 1462 aaPredicted RBP27.44■■□□□ 1.98
CDH11-213ENST00000567934 ZNF608Q9ULD9 1512 aaPredicted RBP27.41■■□□□ 1.98
CDH11-213ENST00000567934 FGD5Q6ZNL6 1462 aa27.38■■□□□ 1.97
CDH11-213ENST00000567934 TARBP1Q13395 1621 aaKnown RBP27.38■■□□□ 1.97
CDH11-213ENST00000567934 SOGA1O94964 1423 aa27.37■■□□□ 1.97
CDH11-213ENST00000567934 RAD54L2Q9Y4B4 1467 aa27.35■■□□□ 1.97
CDH11-213ENST00000567934 EIF4G3O43432 1585 aaKnown RBP27.31■■□□□ 1.96
CDH11-213ENST00000567934 AQRO60306 1485 aaKnown RBP eCLIP27.27■■□□□ 1.96
CDH11-213ENST00000567934 WRNQ14191 1432 aaPredicted RBP eCLIP27.27■■□□□ 1.96
CDH11-213ENST00000567934 TDRD9Q8NDG6 1382 aaKnown RBP27.22■■□□□ 1.95
CDH11-213ENST00000567934 BIVM-ERCC5R4GMW8 1640 aa27.21■■□□□ 1.95
CDH11-213ENST00000567934 TOP2BQ02880 1626 aa27.2■■□□□ 1.95
CDH11-213ENST00000567934 SYNJ1O43426 1573 aa27.2■■□□□ 1.94
CDH11-213ENST00000567934 OSCARQ8IYS5 282 aa27.16■■□□□ 1.94
CDH11-213ENST00000567934 WDR97A6NE52 1622 aa27.15■■□□□ 1.94
CDH11-213ENST00000567934 ABCA10Q8WWZ4 1543 aa27.09■■□□□ 1.93
CDH11-213ENST00000567934 FBLN2P98095 1184 aa27.08■■□□□ 1.93
CDH11-213ENST00000567934 CHD1O14646 1710 aa27.05■■□□□ 1.92
CDH11-213ENST00000567934 GAPVD1Q14C86 1478 aa27.05■■□□□ 1.92
CDH11-213ENST00000567934 PBRM1Q86U86 1689 aa27.05■■□□□ 1.92
CDH11-213ENST00000567934 GRIN2BQ13224 1484 aa27.04■■□□□ 1.92
CDH11-213ENST00000567934 SNAPC4Q5SXM2 1469 aa27.01■■□□□ 1.91
CDH11-213ENST00000567934 ABCA5Q8WWZ7 1642 aa26.99■■□□□ 1.91
CDH11-213ENST00000567934 MAGI1Q96QZ7 1491 aaPredicted RBP26.96■■□□□ 1.91
CDH11-213ENST00000567934 CHMP7Q8WUX9 453 aaPredicted RBP26.95■■□□□ 1.9
CDH11-213ENST00000567934 SYNJ2O15056 1496 aa26.86■■□□□ 1.89
CDH11-213ENST00000567934 ERICH3Q5RHP9 1530 aa26.77■■□□□ 1.88
CDH11-213ENST00000567934 ADAMTS12P58397 1594 aa26.75■■□□□ 1.87
CDH11-213ENST00000567934 KIF27Q86VH2 1401 aa26.73■■□□□ 1.87
CDH11-213ENST00000567934 RIMBP3CA6NJZ7 1639 aa26.71■■□□□ 1.87
CDH11-213ENST00000567934 RIMBP3BA6NNM3 1639 aa26.71■■□□□ 1.87
CDH11-213ENST00000567934 RIMBP3Q9UFD9 1639 aa26.71■■□□□ 1.87
CDH11-213ENST00000567934 FHAD1B1AJZ9 1412 aa26.71■■□□□ 1.87
CDH11-213ENST00000567934 TRIM41Q8WV44 630 aa26.69■■□□□ 1.86
CDH11-213ENST00000567934 GRIN2AQ12879 1464 aa26.68■■□□□ 1.86
CDH11-213ENST00000567934 ARHGEF11O15085 1522 aa26.66■■□□□ 1.86
CDH11-213ENST00000567934 CLASP1Q7Z460 1538 aa26.65■■□□□ 1.86
CDH11-213ENST00000567934 IGF1RP08069 1367 aa26.58■■□□□ 1.84
CDH11-213ENST00000567934 CUL7Q14999 1698 aa26.57■■□□□ 1.84
CDH11-213ENST00000567934 CEP170Q5SW79 1584 aa26.55■■□□□ 1.84
CDH11-213ENST00000567934 NUP160Q12769 1436 aa26.52■■□□□ 1.84
CDH11-213ENST00000567934 CYB5RLQ6IPT4 315 aa26.51■■□□□ 1.83
CDH11-213ENST00000567934 CARMIL1Q5VZK9 1371 aa26.47■■□□□ 1.83
CDH11-213ENST00000567934 RUSC2Q8N2Y8 1516 aa26.45■■□□□ 1.83
CDH11-213ENST00000567934 ARAP1Q96P48 1450 aa26.42■■□□□ 1.82
CDH11-213ENST00000567934 SHROOM2Q13796 1616 aa26.35■■□□□ 1.81
CDH11-213ENST00000567934 JPH4Q96JJ6 628 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms