RNA–Protein interactions for RNA: ENST00000567896.1

PDPR-209, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, humanhuman

TSL 2

Gene PDPR, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPR-209ENST00000567896 NISCHQ9Y2I1 1504 aa24.66■■□□□ 1.54
PDPR-209ENST00000567896 CCDC180Q9P1Z9 1646 aa22.21■■□□□ 1.15
PDPR-209ENST00000567896 ABCC9O60706 1549 aa22.11■■□□□ 1.13
PDPR-209ENST00000567896 RB1CC1Q8TDY2 1594 aa21.09■□□□□ 0.97
PDPR-209ENST00000567896 NACADO15069 1562 aa20.91■□□□□ 0.94
PDPR-209ENST00000567896 DCAF8L2P0C7V8 631 aa20.8■□□□□ 0.92
PDPR-209ENST00000567896 UNC13AQ9UPW8 1703 aa20.7■□□□□ 0.9
PDPR-209ENST00000567896 DNAJC5BQ9UF47 199 aa20.58■□□□□ 0.89
PDPR-209ENST00000567896 MYO15BQ96JP2 1530 aa20.58■□□□□ 0.88
PDPR-209ENST00000567896 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.88
PDPR-209ENST00000567896 ZCCHC6Q5VYS8 1495 aaKnown RBP20.46■□□□□ 0.87
PDPR-209ENST00000567896 BICRAQ9NZM4 1560 aa20.43■□□□□ 0.86
PDPR-209ENST00000567896 DCAF1Q9Y4B6 1507 aa20.35■□□□□ 0.85
PDPR-209ENST00000567896 SCRIBQ14160 1630 aa20.25■□□□□ 0.83
PDPR-209ENST00000567896 SHROOM4Q9ULL8 1493 aa20.15■□□□□ 0.82
PDPR-209ENST00000567896 CC2D2AQ9P2K1 1620 aa20.01■□□□□ 0.79
PDPR-209ENST00000567896 EIF4G1Q04637 1599 aaKnown RBP19.95■□□□□ 0.78
PDPR-209ENST00000567896 CECR2Q9BXF3 1484 aa19.9■□□□□ 0.78
PDPR-209ENST00000567896 SMARCA4P51532 1647 aa19.29■□□□□ 0.68
PDPR-209ENST00000567896 NCAPD3P42695 1498 aa19.24■□□□□ 0.67
PDPR-209ENST00000567896 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
PDPR-209ENST00000567896 ATAD2BQ9ULI0 1458 aa19.22■□□□□ 0.67
PDPR-209ENST00000567896 HMGXB3Q12766 1538 aa19.19■□□□□ 0.66
PDPR-209ENST00000567896 BAZ1AQ9NRL2 1556 aaPredicted RBP19.17■□□□□ 0.66
PDPR-209ENST00000567896 ERCC6Q03468 1493 aa19.12■□□□□ 0.65
PDPR-209ENST00000567896 BAZ1BQ9UIG0 1483 aaKnown RBP19.09■□□□□ 0.65
PDPR-209ENST00000567896 PEG3Q9GZU2 1588 aa19.05■□□□□ 0.64
PDPR-209ENST00000567896 CUX2O14529 1486 aa19.02■□□□□ 0.63
PDPR-209ENST00000567896 MROH2BQ7Z745 1585 aa19.01■□□□□ 0.63
PDPR-209ENST00000567896 NESP48681 1621 aa19■□□□□ 0.63
PDPR-209ENST00000567896 LAMC3Q9Y6N6 1575 aa18.89■□□□□ 0.61
PDPR-209ENST00000567896 DNAJC5Q9H3Z4 198 aa18.87■□□□□ 0.61
PDPR-209ENST00000567896 KIF21AQ7Z4S6 1674 aa18.86■□□□□ 0.61
PDPR-209ENST00000567896 THOC2Q8NI27 1593 aaKnown RBP18.85■□□□□ 0.61
PDPR-209ENST00000567896 WIZO95785 1651 aa18.85■□□□□ 0.61
PDPR-209ENST00000567896 PDS5BQ9NTI5 1447 aa18.73■□□□□ 0.59
PDPR-209ENST00000567896 CADPSQ9ULU8 1353 aa18.66■□□□□ 0.58
PDPR-209ENST00000567896 MRC2Q9UBG0 1479 aa18.6■□□□□ 0.57
PDPR-209ENST00000567896 TOP2AP11388 1531 aaKnown RBP18.59■□□□□ 0.57
PDPR-209ENST00000567896 RSF1Q96T23 1441 aaPredicted RBP18.58■□□□□ 0.57
PDPR-209ENST00000567896 WDR62O43379 1518 aa18.56■□□□□ 0.56
PDPR-209ENST00000567896 CEP164Q9UPV0 1460 aa18.55■□□□□ 0.56
PDPR-209ENST00000567896 FANCD2Q9BXW9 1451 aa18.51■□□□□ 0.55
PDPR-209ENST00000567896 PRDM2Q13029 1718 aa18.5■□□□□ 0.55
PDPR-209ENST00000567896 CFTRP13569 1480 aa18.47■□□□□ 0.55
PDPR-209ENST00000567896 URB2Q14146 1524 aaKnown RBP18.35■□□□□ 0.53
PDPR-209ENST00000567896 CCDC88BA6NC98 1476 aa18.32■□□□□ 0.52
PDPR-209ENST00000567896 TRIM41Q8WV44 630 aa18.17■□□□□ 0.5
PDPR-209ENST00000567896 TOPBP1Q92547 1522 aa18.17■□□□□ 0.5
PDPR-209ENST00000567896 IFT140Q96RY7 1462 aa18.15■□□□□ 0.5
PDPR-209ENST00000567896 DNMBPQ6XZF7 1577 aa18.14■□□□□ 0.49
PDPR-209ENST00000567896 ZNF608Q9ULD9 1512 aaPredicted RBP18.12■□□□□ 0.49
PDPR-209ENST00000567896 EIF4G3O43432 1585 aaKnown RBP18.11■□□□□ 0.49
PDPR-209ENST00000567896 ABCC8Q09428 1581 aa18.11■□□□□ 0.49
PDPR-209ENST00000567896 OSCARQ8IYS5 282 aa18.09■□□□□ 0.49
PDPR-209ENST00000567896 TARBP1Q13395 1621 aaKnown RBP18.03■□□□□ 0.48
PDPR-209ENST00000567896 CHD1O14646 1710 aa18.01■□□□□ 0.47
PDPR-209ENST00000567896 RIMBP3CA6NJZ7 1639 aa17.98■□□□□ 0.47
PDPR-209ENST00000567896 RIMBP3BA6NNM3 1639 aa17.98■□□□□ 0.47
PDPR-209ENST00000567896 RIMBP3Q9UFD9 1639 aa17.98■□□□□ 0.47
PDPR-209ENST00000567896 POLA1P09884 1462 aaPredicted RBP17.98■□□□□ 0.47
PDPR-209ENST00000567896 AQRO60306 1485 aaKnown RBP eCLIP17.95■□□□□ 0.46
PDPR-209ENST00000567896 RAD54L2Q9Y4B4 1467 aa17.91■□□□□ 0.46
PDPR-209ENST00000567896 FGD5Q6ZNL6 1462 aa17.89■□□□□ 0.45
PDPR-209ENST00000567896 ARHGEF11O15085 1522 aa17.89■□□□□ 0.45
PDPR-209ENST00000567896 CUX1P39880 1505 aa17.88■□□□□ 0.45
PDPR-209ENST00000567896 SOGA1O94964 1423 aa17.87■□□□□ 0.45
PDPR-209ENST00000567896 WDR97A6NE52 1622 aa17.85■□□□□ 0.45
PDPR-209ENST00000567896 FBLN2P98095 1184 aa17.85■□□□□ 0.45
PDPR-209ENST00000567896 TDRD9Q8NDG6 1382 aaKnown RBP17.83■□□□□ 0.45
PDPR-209ENST00000567896 SUPT5HO00267 1087 aaKnown RBP17.83■□□□□ 0.44
PDPR-209ENST00000567896 SNAPC4Q5SXM2 1469 aa17.81■□□□□ 0.44
PDPR-209ENST00000567896 PBRM1Q86U86 1689 aa17.8■□□□□ 0.44
PDPR-209ENST00000567896 GRIN2BQ13224 1484 aa17.74■□□□□ 0.43
PDPR-209ENST00000567896 MAGI1Q96QZ7 1491 aaPredicted RBP17.74■□□□□ 0.43
PDPR-209ENST00000567896 SYNJ1O43426 1573 aa17.73■□□□□ 0.43
PDPR-209ENST00000567896 ARAP1Q96P48 1450 aa17.7■□□□□ 0.42
PDPR-209ENST00000567896 CYB5RLQ6IPT4 315 aa17.7■□□□□ 0.42
PDPR-209ENST00000567896 CLASP1Q7Z460 1538 aa17.7■□□□□ 0.42
PDPR-209ENST00000567896 ABCA5Q8WWZ7 1642 aa17.69■□□□□ 0.42
PDPR-209ENST00000567896 CHMP7Q8WUX9 453 aaPredicted RBP17.68■□□□□ 0.42
PDPR-209ENST00000567896 SYNJ2O15056 1496 aa17.68■□□□□ 0.42
PDPR-209ENST00000567896 GAPVD1Q14C86 1478 aa17.68■□□□□ 0.42
PDPR-209ENST00000567896 ABCA10Q8WWZ4 1543 aa17.66■□□□□ 0.42
PDPR-209ENST00000567896 BIVM-ERCC5R4GMW8 1640 aa17.65■□□□□ 0.42
PDPR-209ENST00000567896 TOP2BQ02880 1626 aa17.62■□□□□ 0.41
PDPR-209ENST00000567896 WRNQ14191 1432 aaPredicted RBP eCLIP17.58■□□□□ 0.41
PDPR-209ENST00000567896 ADAMTS12P58397 1594 aa17.57■□□□□ 0.4
PDPR-209ENST00000567896 TRHP20396 242 aaPredicted RBP17.53■□□□□ 0.4
PDPR-209ENST00000567896 GRIN2AQ12879 1464 aa17.52■□□□□ 0.4
PDPR-209ENST00000567896 CEP170Q5SW79 1584 aa17.49■□□□□ 0.39
PDPR-209ENST00000567896 ERICH3Q5RHP9 1530 aa17.46■□□□□ 0.39
PDPR-209ENST00000567896 FHAD1B1AJZ9 1412 aa17.44■□□□□ 0.38
PDPR-209ENST00000567896 ERCC6L2Q5T890 1561 aa17.43■□□□□ 0.38
PDPR-209ENST00000567896 NUP160Q12769 1436 aa17.41■□□□□ 0.38
PDPR-209ENST00000567896 SHROOM2Q13796 1616 aa17.4■□□□□ 0.38
PDPR-209ENST00000567896 RUSC2Q8N2Y8 1516 aa17.33■□□□□ 0.37
PDPR-209ENST00000567896 CUL7Q14999 1698 aa17.28■□□□□ 0.36
PDPR-209ENST00000567896 PRG4Q92954 1404 aaPredicted RBP17.27■□□□□ 0.35
PDPR-209ENST00000567896 KIF27Q86VH2 1401 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms