RNA–Protein interactions for RNA: ENST00000567868.5

SPSB3-209, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-209ENST00000567868 NISCHQ9Y2I1 1504 aa52.34■■■■■ 5.97
SPSB3-209ENST00000567868 CCDC180Q9P1Z9 1646 aa46.02■■■■■ 4.96
SPSB3-209ENST00000567868 ABCC9O60706 1549 aa44.17■■■■■ 4.66
SPSB3-209ENST00000567868 ZCCHC6Q5VYS8 1495 aaKnown RBP43.79■■■■■ 4.6
SPSB3-209ENST00000567868 DCAF8L2P0C7V8 631 aa43.47■■■■■ 4.55
SPSB3-209ENST00000567868 DCAF1Q9Y4B6 1507 aa43.33■■■■■ 4.53
SPSB3-209ENST00000567868 MYO15BQ96JP2 1530 aa43.14■■■■■ 4.5
SPSB3-209ENST00000567868 NACADO15069 1562 aa43.08■■■■■ 4.49
SPSB3-209ENST00000567868 RB1CC1Q8TDY2 1594 aa42.89■■■■■ 4.46
SPSB3-209ENST00000567868 SCRIBQ14160 1630 aa42.13■■■■■ 4.33
SPSB3-209ENST00000567868 SHROOM4Q9ULL8 1493 aa42.04■■■■■ 4.32
SPSB3-209ENST00000567868 UNC13AQ9UPW8 1703 aa41.87■■■■■ 4.29
SPSB3-209ENST00000567868 BICRAQ9NZM4 1560 aa41.54■■■■■ 4.24
SPSB3-209ENST00000567868 PABPN1Q86U42 306 aaKnown RBP eCLIP41.51■■■■■ 4.23
SPSB3-209ENST00000567868 CECR2Q9BXF3 1484 aa40.68■■■■■ 4.1
SPSB3-209ENST00000567868 BAZ1AQ9NRL2 1556 aaPredicted RBP40.5■■■■■ 4.07
SPSB3-209ENST00000567868 SMARCA4P51532 1647 aa40.38■■■■■ 4.05
SPSB3-209ENST00000567868 EIF4G1Q04637 1599 aaKnown RBP40.38■■■■■ 4.05
SPSB3-209ENST00000567868 MROH2BQ7Z745 1585 aa40.36■■■■■ 4.05
SPSB3-209ENST00000567868 RSF1Q96T23 1441 aaPredicted RBP40.29■■■■■ 4.04
SPSB3-209ENST00000567868 SUPT5HO00267 1087 aaKnown RBP40.11■■■■■ 4.01
SPSB3-209ENST00000567868 WIZO95785 1651 aa39.97■■■■□ 3.99
SPSB3-209ENST00000567868 CC2D2AQ9P2K1 1620 aa39.97■■■■□ 3.99
SPSB3-209ENST00000567868 PEG3Q9GZU2 1588 aa39.96■■■■□ 3.99
SPSB3-209ENST00000567868 ATAD2BQ9ULI0 1458 aa39.94■■■■□ 3.98
SPSB3-209ENST00000567868 SMARCA2P51531 1590 aa39.93■■■■□ 3.98
SPSB3-209ENST00000567868 NCAPD3P42695 1498 aa39.77■■■■□ 3.96
SPSB3-209ENST00000567868 DNAJC5BQ9UF47 199 aa39.67■■■■□ 3.94
SPSB3-209ENST00000567868 BAZ1BQ9UIG0 1483 aaKnown RBP39.67■■■■□ 3.94
SPSB3-209ENST00000567868 HMGXB3Q12766 1538 aa39.62■■■■□ 3.93
SPSB3-209ENST00000567868 TOP2AP11388 1531 aaKnown RBP39.6■■■■□ 3.93
SPSB3-209ENST00000567868 CCDC88BA6NC98 1476 aa39.17■■■■□ 3.86
SPSB3-209ENST00000567868 CADPSQ9ULU8 1353 aa38.69■■■■□ 3.78
SPSB3-209ENST00000567868 CFTRP13569 1480 aa38.65■■■■□ 3.78
SPSB3-209ENST00000567868 LAMC3Q9Y6N6 1575 aa38.53■■■■□ 3.76
SPSB3-209ENST00000567868 NESP48681 1621 aa38.51■■■■□ 3.76
SPSB3-209ENST00000567868 PRDM2Q13029 1718 aa38.34■■■■□ 3.73
SPSB3-209ENST00000567868 PDS5BQ9NTI5 1447 aa38.3■■■■□ 3.72
SPSB3-209ENST00000567868 FANCD2Q9BXW9 1451 aa38.22■■■■□ 3.71
SPSB3-209ENST00000567868 CEP164Q9UPV0 1460 aa38.08■■■■□ 3.69
SPSB3-209ENST00000567868 KIF21AQ7Z4S6 1674 aa38.03■■■■□ 3.68
SPSB3-209ENST00000567868 ABCC8Q09428 1581 aa38.02■■■■□ 3.68
SPSB3-209ENST00000567868 CHIC1Q5VXU3 224 aa38.01■■■■□ 3.67
SPSB3-209ENST00000567868 ERCC6Q03468 1493 aa38■■■■□ 3.67
SPSB3-209ENST00000567868 WRNQ14191 1432 aaPredicted RBP eCLIP37.97■■■■□ 3.67
SPSB3-209ENST00000567868 TRIM41Q8WV44 630 aa37.83■■■■□ 3.65
SPSB3-209ENST00000567868 MRC2Q9UBG0 1479 aa37.8■■■■□ 3.64
SPSB3-209ENST00000567868 CUX1P39880 1505 aa37.8■■■■□ 3.64
SPSB3-209ENST00000567868 SYNJ1O43426 1573 aa37.77■■■■□ 3.64
SPSB3-209ENST00000567868 URB2Q14146 1524 aaKnown RBP37.77■■■■□ 3.64
SPSB3-209ENST00000567868 DNMBPQ6XZF7 1577 aa37.74■■■■□ 3.63
SPSB3-209ENST00000567868 TOP2BQ02880 1626 aa37.73■■■■□ 3.63
SPSB3-209ENST00000567868 TOPBP1Q92547 1522 aa37.72■■■■□ 3.63
SPSB3-209ENST00000567868 BIVM-ERCC5R4GMW8 1640 aa37.69■■■■□ 3.62
SPSB3-209ENST00000567868 THOC2Q8NI27 1593 aaKnown RBP37.65■■■■□ 3.62
SPSB3-209ENST00000567868 WDR62O43379 1518 aa37.62■■■■□ 3.61
SPSB3-209ENST00000567868 FGD5Q6ZNL6 1462 aa37.53■■■■□ 3.6
SPSB3-209ENST00000567868 POLA1P09884 1462 aaPredicted RBP37.47■■■■□ 3.59
SPSB3-209ENST00000567868 SOGA1O94964 1423 aa37.37■■■■□ 3.57
SPSB3-209ENST00000567868 RAD54L2Q9Y4B4 1467 aa37.32■■■■□ 3.56
SPSB3-209ENST00000567868 CUX2O14529 1486 aa37.31■■■■□ 3.56
SPSB3-209ENST00000567868 IFT140Q96RY7 1462 aa37.24■■■■□ 3.55
SPSB3-209ENST00000567868 ABCA10Q8WWZ4 1543 aa37.2■■■■□ 3.55
SPSB3-209ENST00000567868 TARBP1Q13395 1621 aaKnown RBP37.2■■■■□ 3.54
SPSB3-209ENST00000567868 KIF27Q86VH2 1401 aa37.1■■■■□ 3.53
SPSB3-209ENST00000567868 WDR97A6NE52 1622 aa37.09■■■■□ 3.53
SPSB3-209ENST00000567868 RUSC2Q8N2Y8 1516 aa37.07■■■■□ 3.52
SPSB3-209ENST00000567868 EEA1Q15075 1411 aa37.05■■■■□ 3.52
SPSB3-209ENST00000567868 TDRD9Q8NDG6 1382 aaKnown RBP37.05■■■■□ 3.52
SPSB3-209ENST00000567868 FAM9AQ8IZU1 332 aaPredicted RBP37.04■■■■□ 3.52
SPSB3-209ENST00000567868 ZNF608Q9ULD9 1512 aaPredicted RBP36.98■■■■□ 3.51
SPSB3-209ENST00000567868 AQRO60306 1485 aaKnown RBP eCLIP36.94■■■■□ 3.52e-8■■■■■ 44.6
SPSB3-209ENST00000567868 GAPVD1Q14C86 1478 aa36.94■■■■□ 3.5
SPSB3-209ENST00000567868 ABCA5Q8WWZ7 1642 aa36.93■■■■□ 3.5
SPSB3-209ENST00000567868 CSRNP3Q8WYN3 585 aa36.92■■■■□ 3.5
SPSB3-209ENST00000567868 IGF1RP08069 1367 aa36.84■■■■□ 3.49
SPSB3-209ENST00000567868 EIF4G3O43432 1585 aaKnown RBP36.84■■■■□ 3.49
SPSB3-209ENST00000567868 GRIN2BQ13224 1484 aa36.79■■■■□ 3.48
SPSB3-209ENST00000567868 ERICH3Q5RHP9 1530 aa36.77■■■■□ 3.48
SPSB3-209ENST00000567868 PBRM1Q86U86 1689 aa36.72■■■■□ 3.47
SPSB3-209ENST00000567868 CARMIL1Q5VZK9 1371 aa36.65■■■■□ 3.46
SPSB3-209ENST00000567868 PRXQ9BXM0 1461 aa36.62■■■■□ 3.45
SPSB3-209ENST00000567868 CUL7Q14999 1698 aa36.61■■■■□ 3.45
SPSB3-209ENST00000567868 SNAPC4Q5SXM2 1469 aa36.59■■■■□ 3.45
SPSB3-209ENST00000567868 MAGI1Q96QZ7 1491 aaPredicted RBP36.56■■■■□ 3.44
SPSB3-209ENST00000567868 FHAD1B1AJZ9 1412 aa36.55■■■■□ 3.44
SPSB3-209ENST00000567868 KIF21BO75037 1637 aa36.54■■■■□ 3.44
SPSB3-209ENST00000567868 RAPGEF2Q9Y4G8 1499 aa36.52■■■■□ 3.44
SPSB3-209ENST00000567868 ADAMTS12P58397 1594 aa36.51■■■■□ 3.44
SPSB3-209ENST00000567868 EHMT2Q96KQ7 1210 aa36.49■■■■□ 3.43
SPSB3-209ENST00000567868 LOC105371045A0A1W2PR82 267 aa36.48■■■■□ 3.43
SPSB3-209ENST00000567868 GOLGA3Q08378 1498 aa36.45■■■■□ 3.43
SPSB3-209ENST00000567868 SYNJ2O15056 1496 aa36.43■■■■□ 3.42
SPSB3-209ENST00000567868 CHMP7Q8WUX9 453 aaPredicted RBP36.41■■■■□ 3.42
SPSB3-209ENST00000567868 FBLN2P98095 1184 aa36.36■■■■□ 3.41
SPSB3-209ENST00000567868 UBTFP17480 764 aaKnown RBP36.35■■■■□ 3.41
SPSB3-209ENST00000567868 GRIN2AQ12879 1464 aa36.31■■■■□ 3.4
SPSB3-209ENST00000567868 TNIKQ9UKE5 1360 aa36.2■■■■□ 3.39
SPSB3-209ENST00000567868 CHD1O14646 1710 aa36.18■■■■□ 3.38
SPSB3-209ENST00000567868 NUP160Q12769 1436 aa36.1■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms