RNA–Protein interactions for RNA: ENST00000567690.5

CCNDBP1-212, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 5

Gene CCNDBP1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-212ENST00000567690 NISCHQ9Y2I1 1504 aa17.87■□□□□ 0.45
CCNDBP1-212ENST00000567690 CCDC180Q9P1Z9 1646 aa16.01■□□□□ 0.15
CCNDBP1-212ENST00000567690 ABCC9O60706 1549 aa15.99■□□□□ 0.15
CCNDBP1-212ENST00000567690 RB1CC1Q8TDY2 1594 aa15.2■□□□□ 0.02
CCNDBP1-212ENST00000567690 DCAF8L2P0C7V8 631 aa15.1■□□□□ 0.01
CCNDBP1-212ENST00000567690 NACADO15069 1562 aa15.08■□□□□ 0
CCNDBP1-212ENST00000567690 UNC13AQ9UPW8 1703 aa14.89□□□□□ -0.03
CCNDBP1-212ENST00000567690 PABPN1Q86U42 306 aaKnown RBP eCLIP14.88□□□□□ -0.03
CCNDBP1-212ENST00000567690 DNAJC5BQ9UF47 199 aa14.87□□□□□ -0.03
CCNDBP1-212ENST00000567690 MYO15BQ96JP2 1530 aa14.85□□□□□ -0.03
CCNDBP1-212ENST00000567690 ZCCHC6Q5VYS8 1495 aaKnown RBP14.84□□□□□ -0.03
CCNDBP1-212ENST00000567690 BICRAQ9NZM4 1560 aa14.77□□□□□ -0.05
CCNDBP1-212ENST00000567690 DCAF1Q9Y4B6 1507 aa14.71□□□□□ -0.06
CCNDBP1-212ENST00000567690 SCRIBQ14160 1630 aa14.67□□□□□ -0.06
CCNDBP1-212ENST00000567690 SHROOM4Q9ULL8 1493 aa14.5□□□□□ -0.09
CCNDBP1-212ENST00000567690 CC2D2AQ9P2K1 1620 aa14.42□□□□□ -0.1
CCNDBP1-212ENST00000567690 EIF4G1Q04637 1599 aaKnown RBP14.4□□□□□ -0.1
CCNDBP1-212ENST00000567690 CECR2Q9BXF3 1484 aa14.36□□□□□ -0.11
CCNDBP1-212ENST00000567690 SMARCA4P51532 1647 aa13.95□□□□□ -0.18
CCNDBP1-212ENST00000567690 NCAPD3P42695 1498 aa13.91□□□□□ -0.18
CCNDBP1-212ENST00000567690 ATAD2BQ9ULI0 1458 aa13.91□□□□□ -0.18
CCNDBP1-212ENST00000567690 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
CCNDBP1-212ENST00000567690 BAZ1AQ9NRL2 1556 aaPredicted RBP13.88□□□□□ -0.19
CCNDBP1-212ENST00000567690 HMGXB3Q12766 1538 aa13.85□□□□□ -0.19
CCNDBP1-212ENST00000567690 BAZ1BQ9UIG0 1483 aaKnown RBP13.81□□□□□ -0.2
CCNDBP1-212ENST00000567690 MROH2BQ7Z745 1585 aa13.8□□□□□ -0.2
CCNDBP1-212ENST00000567690 ERCC6Q03468 1493 aa13.8□□□□□ -0.2
CCNDBP1-212ENST00000567690 NESP48681 1621 aa13.76□□□□□ -0.21
CCNDBP1-212ENST00000567690 PEG3Q9GZU2 1588 aa13.76□□□□□ -0.21
CCNDBP1-212ENST00000567690 CUX2O14529 1486 aa13.68□□□□□ -0.22
CCNDBP1-212ENST00000567690 WIZO95785 1651 aa13.66□□□□□ -0.22
CCNDBP1-212ENST00000567690 LAMC3Q9Y6N6 1575 aa13.62□□□□□ -0.23
CCNDBP1-212ENST00000567690 KIF21AQ7Z4S6 1674 aa13.59□□□□□ -0.23
CCNDBP1-212ENST00000567690 THOC2Q8NI27 1593 aaKnown RBP13.59□□□□□ -0.23
CCNDBP1-212ENST00000567690 DNAJC5Q9H3Z4 198 aa13.55□□□□□ -0.24
CCNDBP1-212ENST00000567690 PDS5BQ9NTI5 1447 aa13.52□□□□□ -0.25
CCNDBP1-212ENST00000567690 RSF1Q96T23 1441 aaPredicted RBP13.51□□□□□ -0.25
CCNDBP1-212ENST00000567690 CADPSQ9ULU8 1353 aa13.5□□□□□ -0.25
CCNDBP1-212ENST00000567690 TOP2AP11388 1531 aaKnown RBP13.47□□□□□ -0.25
CCNDBP1-212ENST00000567690 MRC2Q9UBG0 1479 aa13.44□□□□□ -0.26
CCNDBP1-212ENST00000567690 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
CCNDBP1-212ENST00000567690 FANCD2Q9BXW9 1451 aa13.4□□□□□ -0.26
CCNDBP1-212ENST00000567690 WDR62O43379 1518 aa13.39□□□□□ -0.27
CCNDBP1-212ENST00000567690 CFTRP13569 1480 aa13.37□□□□□ -0.27
CCNDBP1-212ENST00000567690 CCDC88BA6NC98 1476 aa13.29□□□□□ -0.28
CCNDBP1-212ENST00000567690 URB2Q14146 1524 aaKnown RBP13.29□□□□□ -0.28
CCNDBP1-212ENST00000567690 PRDM2Q13029 1718 aa13.29□□□□□ -0.28
CCNDBP1-212ENST00000567690 TOPBP1Q92547 1522 aa13.15□□□□□ -0.3
CCNDBP1-212ENST00000567690 ZNF608Q9ULD9 1512 aaPredicted RBP13.13□□□□□ -0.31
CCNDBP1-212ENST00000567690 DNMBPQ6XZF7 1577 aa13.11□□□□□ -0.31
CCNDBP1-212ENST00000567690 IFT140Q96RY7 1462 aa13.11□□□□□ -0.31
CCNDBP1-212ENST00000567690 TRIM41Q8WV44 630 aa13.11□□□□□ -0.31
CCNDBP1-212ENST00000567690 EIF4G3O43432 1585 aaKnown RBP13.07□□□□□ -0.32
CCNDBP1-212ENST00000567690 ABCC8Q09428 1581 aa13.06□□□□□ -0.32
CCNDBP1-212ENST00000567690 OSCARQ8IYS5 282 aa13.05□□□□□ -0.32
CCNDBP1-212ENST00000567690 SUPT5HO00267 1087 aaKnown RBP13.04□□□□□ -0.32
CCNDBP1-212ENST00000567690 POLA1P09884 1462 aaPredicted RBP13.03□□□□□ -0.32
CCNDBP1-212ENST00000567690 TARBP1Q13395 1621 aaKnown RBP13.02□□□□□ -0.32
CCNDBP1-212ENST00000567690 AQRO60306 1485 aaKnown RBP eCLIP13□□□□□ -0.331e-6■■□□□ 13.6
CCNDBP1-212ENST00000567690 RAD54L2Q9Y4B4 1467 aa12.99□□□□□ -0.33
CCNDBP1-212ENST00000567690 FGD5Q6ZNL6 1462 aa12.97□□□□□ -0.33
CCNDBP1-212ENST00000567690 CHD1O14646 1710 aa12.97□□□□□ -0.33
CCNDBP1-212ENST00000567690 CUX1P39880 1505 aa12.97□□□□□ -0.33
CCNDBP1-212ENST00000567690 RIMBP3CA6NJZ7 1639 aa12.95□□□□□ -0.34
CCNDBP1-212ENST00000567690 RIMBP3BA6NNM3 1639 aa12.95□□□□□ -0.34
CCNDBP1-212ENST00000567690 RIMBP3Q9UFD9 1639 aa12.95□□□□□ -0.34
CCNDBP1-212ENST00000567690 SOGA1O94964 1423 aa12.94□□□□□ -0.34
CCNDBP1-212ENST00000567690 TDRD9Q8NDG6 1382 aaKnown RBP12.94□□□□□ -0.34
CCNDBP1-212ENST00000567690 FBLN2P98095 1184 aa12.92□□□□□ -0.34
CCNDBP1-212ENST00000567690 ARHGEF11O15085 1522 aa12.91□□□□□ -0.34
CCNDBP1-212ENST00000567690 SNAPC4Q5SXM2 1469 aa12.89□□□□□ -0.35
CCNDBP1-212ENST00000567690 WDR97A6NE52 1622 aa12.88□□□□□ -0.35
CCNDBP1-212ENST00000567690 PBRM1Q86U86 1689 aa12.83□□□□□ -0.35
CCNDBP1-212ENST00000567690 GRIN2BQ13224 1484 aa12.83□□□□□ -0.36
CCNDBP1-212ENST00000567690 MAGI1Q96QZ7 1491 aaPredicted RBP12.81□□□□□ -0.36
CCNDBP1-212ENST00000567690 GAPVD1Q14C86 1478 aa12.8□□□□□ -0.36
CCNDBP1-212ENST00000567690 ARAP1Q96P48 1450 aa12.79□□□□□ -0.36
CCNDBP1-212ENST00000567690 SYNJ1O43426 1573 aa12.79□□□□□ -0.36
CCNDBP1-212ENST00000567690 CHMP7Q8WUX9 453 aaPredicted RBP12.79□□□□□ -0.36
CCNDBP1-212ENST00000567690 ABCA5Q8WWZ7 1642 aa12.79□□□□□ -0.36
CCNDBP1-212ENST00000567690 ABCA10Q8WWZ4 1543 aa12.78□□□□□ -0.36
CCNDBP1-212ENST00000567690 CYB5RLQ6IPT4 315 aa12.78□□□□□ -0.36
CCNDBP1-212ENST00000567690 SYNJ2O15056 1496 aa12.78□□□□□ -0.36
CCNDBP1-212ENST00000567690 CLASP1Q7Z460 1538 aa12.78□□□□□ -0.36
CCNDBP1-212ENST00000567690 WRNQ14191 1432 aaPredicted RBP eCLIP12.77□□□□□ -0.37
CCNDBP1-212ENST00000567690 TOP2BQ02880 1626 aa12.77□□□□□ -0.37
CCNDBP1-212ENST00000567690 BIVM-ERCC5R4GMW8 1640 aa12.77□□□□□ -0.37
CCNDBP1-212ENST00000567690 ADAMTS12P58397 1594 aa12.71□□□□□ -0.37
CCNDBP1-212ENST00000567690 GRIN2AQ12879 1464 aa12.68□□□□□ -0.38
CCNDBP1-212ENST00000567690 CEP170Q5SW79 1584 aa12.65□□□□□ -0.38
CCNDBP1-212ENST00000567690 TRHP20396 242 aaPredicted RBP12.65□□□□□ -0.38
CCNDBP1-212ENST00000567690 ERCC6L2Q5T890 1561 aa12.63□□□□□ -0.39
CCNDBP1-212ENST00000567690 FHAD1B1AJZ9 1412 aa12.62□□□□□ -0.39
CCNDBP1-212ENST00000567690 ERICH3Q5RHP9 1530 aa12.62□□□□□ -0.39
CCNDBP1-212ENST00000567690 NUP160Q12769 1436 aa12.61□□□□□ -0.39
CCNDBP1-212ENST00000567690 SHROOM2Q13796 1616 aa12.55□□□□□ -0.4
CCNDBP1-212ENST00000567690 RUSC2Q8N2Y8 1516 aa12.53□□□□□ -0.4
CCNDBP1-212ENST00000567690 PRG4Q92954 1404 aaPredicted RBP12.51□□□□□ -0.41
CCNDBP1-212ENST00000567690 KIF27Q86VH2 1401 aa12.5□□□□□ -0.41
CCNDBP1-212ENST00000567690 CUL7Q14999 1698 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms