RNA–Protein interactions for RNA: ENST00000567681.1

NEIL1-216, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 605 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-216ENST00000567681 NISCHQ9Y2I1 1504 aa42.81■■■■■ 4.44
NEIL1-216ENST00000567681 CCDC180Q9P1Z9 1646 aa38.49■■■■□ 3.75
NEIL1-216ENST00000567681 ABCC9O60706 1549 aa38.44■■■■□ 3.74
NEIL1-216ENST00000567681 RB1CC1Q8TDY2 1594 aa36.59■■■■□ 3.45
NEIL1-216ENST00000567681 NACADO15069 1562 aa36.34■■■■□ 3.41
NEIL1-216ENST00000567681 DNAJC5BQ9UF47 199 aa36.16■■■■□ 3.38
NEIL1-216ENST00000567681 UNC13AQ9UPW8 1703 aa35.94■■■■□ 3.34
NEIL1-216ENST00000567681 DCAF8L2P0C7V8 631 aa35.92■■■■□ 3.34
NEIL1-216ENST00000567681 MYO15BQ96JP2 1530 aa35.86■■■■□ 3.33
NEIL1-216ENST00000567681 PABPN1Q86U42 306 aaKnown RBP eCLIP35.73■■■■□ 3.31
NEIL1-216ENST00000567681 BICRAQ9NZM4 1560 aa35.65■■■■□ 3.3
NEIL1-216ENST00000567681 ZCCHC6Q5VYS8 1495 aaKnown RBP35.49■■■■□ 3.27
NEIL1-216ENST00000567681 DCAF1Q9Y4B6 1507 aa35.38■■■■□ 3.25
NEIL1-216ENST00000567681 SHROOM4Q9ULL8 1493 aa35.07■■■■□ 3.2
NEIL1-216ENST00000567681 SCRIBQ14160 1630 aa35.02■■■■□ 3.2
NEIL1-216ENST00000567681 CC2D2AQ9P2K1 1620 aa34.79■■■■□ 3.16
NEIL1-216ENST00000567681 EIF4G1Q04637 1599 aaKnown RBP34.7■■■■□ 3.15
NEIL1-216ENST00000567681 CECR2Q9BXF3 1484 aa34.64■■■■□ 3.14
NEIL1-216ENST00000567681 NCAPD3P42695 1498 aa33.55■■■□□ 2.96
NEIL1-216ENST00000567681 ATAD2BQ9ULI0 1458 aa33.44■■■□□ 2.94
NEIL1-216ENST00000567681 SMARCA4P51532 1647 aa33.43■■■□□ 2.94
NEIL1-216ENST00000567681 SMARCA2P51531 1590 aa33.32■■■□□ 2.92
NEIL1-216ENST00000567681 HMGXB3Q12766 1538 aa33.32■■■□□ 2.92
NEIL1-216ENST00000567681 BAZ1AQ9NRL2 1556 aaPredicted RBP33.21■■■□□ 2.91
NEIL1-216ENST00000567681 DNAJC5Q9H3Z4 198 aa33.18■■■□□ 2.9
NEIL1-216ENST00000567681 CUX2O14529 1486 aa33.16■■■□□ 2.9
NEIL1-216ENST00000567681 PEG3Q9GZU2 1588 aa33.14■■■□□ 2.9
NEIL1-216ENST00000567681 ERCC6Q03468 1493 aa33.12■■■□□ 2.89
NEIL1-216ENST00000567681 NESP48681 1621 aa33.06■■■□□ 2.88
NEIL1-216ENST00000567681 BAZ1BQ9UIG0 1483 aaKnown RBP33.06■■■□□ 2.88
NEIL1-216ENST00000567681 MROH2BQ7Z745 1585 aa33■■■□□ 2.87
NEIL1-216ENST00000567681 LAMC3Q9Y6N6 1575 aa32.81■■■□□ 2.84
NEIL1-216ENST00000567681 THOC2Q8NI27 1593 aaKnown RBP32.8■■■□□ 2.84
NEIL1-216ENST00000567681 KIF21AQ7Z4S6 1674 aa32.69■■■□□ 2.82
NEIL1-216ENST00000567681 WIZO95785 1651 aa32.62■■■□□ 2.81
NEIL1-216ENST00000567681 PDS5BQ9NTI5 1447 aa32.53■■■□□ 2.8
NEIL1-216ENST00000567681 CADPSQ9ULU8 1353 aa32.47■■■□□ 2.79
NEIL1-216ENST00000567681 MRC2Q9UBG0 1479 aa32.31■■■□□ 2.76
NEIL1-216ENST00000567681 WDR62O43379 1518 aa32.3■■■□□ 2.76
NEIL1-216ENST00000567681 RSF1Q96T23 1441 aaPredicted RBP32.26■■■□□ 2.76
NEIL1-216ENST00000567681 TOP2AP11388 1531 aaKnown RBP32.17■■■□□ 2.74
NEIL1-216ENST00000567681 CEP164Q9UPV0 1460 aa32.16■■■□□ 2.74
NEIL1-216ENST00000567681 CFTRP13569 1480 aa32.15■■■□□ 2.74
NEIL1-216ENST00000567681 FANCD2Q9BXW9 1451 aa32.13■■■□□ 2.73
NEIL1-216ENST00000567681 URB2Q14146 1524 aaKnown RBP31.93■■■□□ 2.7
NEIL1-216ENST00000567681 PRDM2Q13029 1718 aa31.92■■■□□ 2.7
NEIL1-216ENST00000567681 CCDC88BA6NC98 1476 aa31.79■■■□□ 2.68
NEIL1-216ENST00000567681 TRIM41Q8WV44 630 aa31.6■■■□□ 2.65
NEIL1-216ENST00000567681 TOPBP1Q92547 1522 aa31.54■■■□□ 2.64
NEIL1-216ENST00000567681 OSCARQ8IYS5 282 aa31.54■■■□□ 2.64
NEIL1-216ENST00000567681 ZNF608Q9ULD9 1512 aaPredicted RBP31.53■■■□□ 2.64
NEIL1-216ENST00000567681 IFT140Q96RY7 1462 aa31.52■■■□□ 2.64
NEIL1-216ENST00000567681 DNMBPQ6XZF7 1577 aa31.43■■■□□ 2.62
NEIL1-216ENST00000567681 ABCC8Q09428 1581 aa31.4■■■□□ 2.62
NEIL1-216ENST00000567681 EIF4G3O43432 1585 aaKnown RBP31.38■■■□□ 2.61
NEIL1-216ENST00000567681 TARBP1Q13395 1621 aaKnown RBP31.34■■■□□ 2.61
NEIL1-216ENST00000567681 RIMBP3CA6NJZ7 1639 aa31.3■■■□□ 2.6
NEIL1-216ENST00000567681 RIMBP3BA6NNM3 1639 aa31.3■■■□□ 2.6
NEIL1-216ENST00000567681 RIMBP3Q9UFD9 1639 aa31.3■■■□□ 2.6
NEIL1-216ENST00000567681 POLA1P09884 1462 aaPredicted RBP31.22■■■□□ 2.59
NEIL1-216ENST00000567681 AQRO60306 1485 aaKnown RBP eCLIP31.19■■■□□ 2.58
NEIL1-216ENST00000567681 CHD1O14646 1710 aa31.18■■■□□ 2.58
NEIL1-216ENST00000567681 ARHGEF11O15085 1522 aa31.16■■■□□ 2.58
NEIL1-216ENST00000567681 RAD54L2Q9Y4B4 1467 aa31.09■■■□□ 2.57
NEIL1-216ENST00000567681 CUX1P39880 1505 aa31.01■■■□□ 2.55
NEIL1-216ENST00000567681 FGD5Q6ZNL6 1462 aa31.01■■■□□ 2.55
NEIL1-216ENST00000567681 SOGA1O94964 1423 aa31■■■□□ 2.55
NEIL1-216ENST00000567681 WDR97A6NE52 1622 aa30.97■■■□□ 2.55
NEIL1-216ENST00000567681 TDRD9Q8NDG6 1382 aaKnown RBP30.96■■■□□ 2.55
NEIL1-216ENST00000567681 SNAPC4Q5SXM2 1469 aa30.88■■■□□ 2.53
NEIL1-216ENST00000567681 ARAP1Q96P48 1450 aa30.87■■■□□ 2.53
NEIL1-216ENST00000567681 FBLN2P98095 1184 aa30.85■■■□□ 2.53
NEIL1-216ENST00000567681 CLASP1Q7Z460 1538 aa30.82■■■□□ 2.52
NEIL1-216ENST00000567681 CYB5RLQ6IPT4 315 aa30.81■■■□□ 2.52
NEIL1-216ENST00000567681 MAGI1Q96QZ7 1491 aaPredicted RBP30.79■■■□□ 2.52
NEIL1-216ENST00000567681 GRIN2BQ13224 1484 aa30.76■■■□□ 2.52
NEIL1-216ENST00000567681 PBRM1Q86U86 1689 aa30.75■■■□□ 2.51
NEIL1-216ENST00000567681 SYNJ1O43426 1573 aa30.7■■■□□ 2.5
NEIL1-216ENST00000567681 SYNJ2O15056 1496 aa30.7■■■□□ 2.5
NEIL1-216ENST00000567681 ABCA5Q8WWZ7 1642 aa30.69■■■□□ 2.5
NEIL1-216ENST00000567681 ABCA10Q8WWZ4 1543 aa30.66■■■□□ 2.5
NEIL1-216ENST00000567681 GAPVD1Q14C86 1478 aa30.65■■■□□ 2.5
NEIL1-216ENST00000567681 CHMP7Q8WUX9 453 aaPredicted RBP30.64■■■□□ 2.5
NEIL1-216ENST00000567681 SUPT5HO00267 1087 aaKnown RBP30.63■■■□□ 2.49
NEIL1-216ENST00000567681 BIVM-ERCC5R4GMW8 1640 aa30.53■■■□□ 2.48
NEIL1-216ENST00000567681 TOP2BQ02880 1626 aa30.5■■■□□ 2.47
NEIL1-216ENST00000567681 WRNQ14191 1432 aaPredicted RBP eCLIP30.45■■■□□ 2.46
NEIL1-216ENST00000567681 ADAMTS12P58397 1594 aa30.43■■■□□ 2.46
NEIL1-216ENST00000567681 TRHP20396 242 aaPredicted RBP30.41■■■□□ 2.46
NEIL1-216ENST00000567681 GRIN2AQ12879 1464 aa30.4■■■□□ 2.46
NEIL1-216ENST00000567681 CEP170Q5SW79 1584 aa30.36■■■□□ 2.45
NEIL1-216ENST00000567681 ERCC6L2Q5T890 1561 aa30.34■■■□□ 2.45
NEIL1-216ENST00000567681 NUP160Q12769 1436 aa30.32■■■□□ 2.44
NEIL1-216ENST00000567681 SHROOM2Q13796 1616 aa30.27■■■□□ 2.44
NEIL1-216ENST00000567681 ERICH3Q5RHP9 1530 aa30.27■■■□□ 2.44
NEIL1-216ENST00000567681 FHAD1B1AJZ9 1412 aa30.25■■■□□ 2.43
NEIL1-216ENST00000567681 RUSC2Q8N2Y8 1516 aa30.02■■■□□ 2.4
NEIL1-216ENST00000567681 PRG4Q92954 1404 aaPredicted RBP29.97■■■□□ 2.39
NEIL1-216ENST00000567681 KIF13AQ9H1H9 1805 aa29.91■■■□□ 2.38
NEIL1-216ENST00000567681 JPH4Q96JJ6 628 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms