RNA–Protein interactions for RNA: ENST00000567643.1

POLR2M-208, Transcript of RNA polymerase II subunit M, humanhuman

TSL 4

Gene POLR2M, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2M-208ENST00000567643 NISCHQ9Y2I1 1504 aa42.92■■■■■ 4.46
POLR2M-208ENST00000567643 CCDC180Q9P1Z9 1646 aa38.42■■■■□ 3.74
POLR2M-208ENST00000567643 ABCC9O60706 1549 aa37.77■■■■□ 3.64
POLR2M-208ENST00000567643 RB1CC1Q8TDY2 1594 aa36.23■■■■□ 3.39
POLR2M-208ENST00000567643 NACADO15069 1562 aa36.1■■■■□ 3.37
POLR2M-208ENST00000567643 MYO15BQ96JP2 1530 aa35.78■■■■□ 3.32
POLR2M-208ENST00000567643 DCAF8L2P0C7V8 631 aa35.76■■■■□ 3.32
POLR2M-208ENST00000567643 ZCCHC6Q5VYS8 1495 aaKnown RBP35.7■■■■□ 3.31
POLR2M-208ENST00000567643 UNC13AQ9UPW8 1703 aa35.66■■■■□ 3.3
POLR2M-208ENST00000567643 DCAF1Q9Y4B6 1507 aa35.51■■■■□ 3.27
POLR2M-208ENST00000567643 BICRAQ9NZM4 1560 aa35.23■■■■□ 3.23
POLR2M-208ENST00000567643 PABPN1Q86U42 306 aaKnown RBP eCLIP35.15■■■■□ 3.22
POLR2M-208ENST00000567643 SCRIBQ14160 1630 aa34.97■■■■□ 3.19
POLR2M-208ENST00000567643 DNAJC5BQ9UF47 199 aa34.96■■■■□ 3.19
POLR2M-208ENST00000567643 SHROOM4Q9ULL8 1493 aa34.74■■■■□ 3.15
POLR2M-208ENST00000567643 EIF4G1Q04637 1599 aaKnown RBP34.28■■■■□ 3.08
POLR2M-208ENST00000567643 CC2D2AQ9P2K1 1620 aa34.24■■■■□ 3.07
POLR2M-208ENST00000567643 CECR2Q9BXF3 1484 aa33.97■■■■□ 3.03
POLR2M-208ENST00000567643 SMARCA4P51532 1647 aa33.43■■■□□ 2.94
POLR2M-208ENST00000567643 BAZ1AQ9NRL2 1556 aaPredicted RBP33.28■■■□□ 2.92
POLR2M-208ENST00000567643 NCAPD3P42695 1498 aa33.27■■■□□ 2.92
POLR2M-208ENST00000567643 ATAD2BQ9ULI0 1458 aa33.25■■■□□ 2.91
POLR2M-208ENST00000567643 SMARCA2P51531 1590 aa33.21■■■□□ 2.91
POLR2M-208ENST00000567643 HMGXB3Q12766 1538 aa33.15■■■□□ 2.9
POLR2M-208ENST00000567643 PEG3Q9GZU2 1588 aa33.12■■■□□ 2.89
POLR2M-208ENST00000567643 MROH2BQ7Z745 1585 aa33.09■■■□□ 2.89
POLR2M-208ENST00000567643 BAZ1BQ9UIG0 1483 aaKnown RBP32.95■■■□□ 2.87
POLR2M-208ENST00000567643 WIZO95785 1651 aa32.78■■■□□ 2.84
POLR2M-208ENST00000567643 NESP48681 1621 aa32.63■■■□□ 2.81
POLR2M-208ENST00000567643 ERCC6Q03468 1493 aa32.54■■■□□ 2.8
POLR2M-208ENST00000567643 RSF1Q96T23 1441 aaPredicted RBP32.52■■■□□ 2.8
POLR2M-208ENST00000567643 LAMC3Q9Y6N6 1575 aa32.52■■■□□ 2.8
POLR2M-208ENST00000567643 KIF21AQ7Z4S6 1674 aa32.37■■■□□ 2.77
POLR2M-208ENST00000567643 CUX2O14529 1486 aa32.37■■■□□ 2.77
POLR2M-208ENST00000567643 TOP2AP11388 1531 aaKnown RBP32.35■■■□□ 2.77
POLR2M-208ENST00000567643 THOC2Q8NI27 1593 aaKnown RBP32.31■■■□□ 2.76
POLR2M-208ENST00000567643 CADPSQ9ULU8 1353 aa32.24■■■□□ 2.75
POLR2M-208ENST00000567643 PDS5BQ9NTI5 1447 aa32.18■■■□□ 2.74
POLR2M-208ENST00000567643 CFTRP13569 1480 aa32.03■■■□□ 2.72
POLR2M-208ENST00000567643 PRDM2Q13029 1718 aa32.01■■■□□ 2.72
POLR2M-208ENST00000567643 MRC2Q9UBG0 1479 aa31.94■■■□□ 2.7
POLR2M-208ENST00000567643 CCDC88BA6NC98 1476 aa31.92■■■□□ 2.7
POLR2M-208ENST00000567643 FANCD2Q9BXW9 1451 aa31.91■■■□□ 2.7
POLR2M-208ENST00000567643 CEP164Q9UPV0 1460 aa31.91■■■□□ 2.7
POLR2M-208ENST00000567643 WDR62O43379 1518 aa31.91■■■□□ 2.7
POLR2M-208ENST00000567643 DNAJC5Q9H3Z4 198 aa31.69■■■□□ 2.66
POLR2M-208ENST00000567643 URB2Q14146 1524 aaKnown RBP31.67■■■□□ 2.66
POLR2M-208ENST00000567643 TOPBP1Q92547 1522 aa31.4■■■□□ 2.62
POLR2M-208ENST00000567643 DNMBPQ6XZF7 1577 aa31.36■■■□□ 2.61
POLR2M-208ENST00000567643 ABCC8Q09428 1581 aa31.32■■■□□ 2.6
POLR2M-208ENST00000567643 SUPT5HO00267 1087 aaKnown RBP31.3■■■□□ 2.6
POLR2M-208ENST00000567643 IFT140Q96RY7 1462 aa31.24■■■□□ 2.59
POLR2M-208ENST00000567643 ZNF608Q9ULD9 1512 aaPredicted RBP31.18■■■□□ 2.58
POLR2M-208ENST00000567643 TARBP1Q13395 1621 aaKnown RBP31.16■■■□□ 2.58
POLR2M-208ENST00000567643 EIF4G3O43432 1585 aaKnown RBP31.12■■■□□ 2.57
POLR2M-208ENST00000567643 POLA1P09884 1462 aaPredicted RBP31.11■■■□□ 2.57
POLR2M-208ENST00000567643 CUX1P39880 1505 aa31.07■■■□□ 2.56
POLR2M-208ENST00000567643 FGD5Q6ZNL6 1462 aa30.98■■■□□ 2.55
POLR2M-208ENST00000567643 RAD54L2Q9Y4B4 1467 aa30.96■■■□□ 2.55
POLR2M-208ENST00000567643 WDR97A6NE52 1622 aa30.91■■■□□ 2.54
POLR2M-208ENST00000567643 AQRO60306 1485 aaKnown RBP eCLIP30.91■■■□□ 2.54
POLR2M-208ENST00000567643 SOGA1O94964 1423 aa30.89■■■□□ 2.53
POLR2M-208ENST00000567643 CHD1O14646 1710 aa30.86■■■□□ 2.53
POLR2M-208ENST00000567643 OSCARQ8IYS5 282 aa30.83■■■□□ 2.53
POLR2M-208ENST00000567643 BIVM-ERCC5R4GMW8 1640 aa30.78■■■□□ 2.52
POLR2M-208ENST00000567643 TDRD9Q8NDG6 1382 aaKnown RBP30.76■■■□□ 2.51
POLR2M-208ENST00000567643 TOP2BQ02880 1626 aa30.73■■■□□ 2.51
POLR2M-208ENST00000567643 PBRM1Q86U86 1689 aa30.72■■■□□ 2.51
POLR2M-208ENST00000567643 SYNJ1O43426 1573 aa30.72■■■□□ 2.51
POLR2M-208ENST00000567643 ABCA5Q8WWZ7 1642 aa30.66■■■□□ 2.5
POLR2M-208ENST00000567643 ABCA10Q8WWZ4 1543 aa30.66■■■□□ 2.5
POLR2M-208ENST00000567643 SNAPC4Q5SXM2 1469 aa30.65■■■□□ 2.5
POLR2M-208ENST00000567643 WRNQ14191 1432 aaPredicted RBP eCLIP30.64■■■□□ 2.5
POLR2M-208ENST00000567643 GRIN2BQ13224 1484 aa30.61■■■□□ 2.49
POLR2M-208ENST00000567643 RIMBP3CA6NJZ7 1639 aa30.61■■■□□ 2.49
POLR2M-208ENST00000567643 RIMBP3BA6NNM3 1639 aa30.61■■■□□ 2.49
POLR2M-208ENST00000567643 RIMBP3Q9UFD9 1639 aa30.61■■■□□ 2.49
POLR2M-208ENST00000567643 MAGI1Q96QZ7 1491 aaPredicted RBP30.59■■■□□ 2.49
POLR2M-208ENST00000567643 GAPVD1Q14C86 1478 aa30.57■■■□□ 2.48
POLR2M-208ENST00000567643 ARHGEF11O15085 1522 aa30.5■■■□□ 2.47
POLR2M-208ENST00000567643 FBLN2P98095 1184 aa30.48■■■□□ 2.47
POLR2M-208ENST00000567643 TRIM41Q8WV44 630 aa30.47■■■□□ 2.47
POLR2M-208ENST00000567643 SYNJ2O15056 1496 aa30.46■■■□□ 2.47
POLR2M-208ENST00000567643 CLASP1Q7Z460 1538 aa30.43■■■□□ 2.46
POLR2M-208ENST00000567643 ADAMTS12P58397 1594 aa30.37■■■□□ 2.45
POLR2M-208ENST00000567643 CHMP7Q8WUX9 453 aaPredicted RBP30.36■■■□□ 2.45
POLR2M-208ENST00000567643 ERICH3Q5RHP9 1530 aa30.3■■■□□ 2.44
POLR2M-208ENST00000567643 GRIN2AQ12879 1464 aa30.25■■■□□ 2.43
POLR2M-208ENST00000567643 ARAP1Q96P48 1450 aa30.23■■■□□ 2.43
POLR2M-208ENST00000567643 FHAD1B1AJZ9 1412 aa30.18■■■□□ 2.42
POLR2M-208ENST00000567643 CEP170Q5SW79 1584 aa30.18■■■□□ 2.42
POLR2M-208ENST00000567643 NUP160Q12769 1436 aa30.13■■■□□ 2.41
POLR2M-208ENST00000567643 CYB5RLQ6IPT4 315 aa30.08■■■□□ 2.41
POLR2M-208ENST00000567643 SHROOM2Q13796 1616 aa30.05■■■□□ 2.4
POLR2M-208ENST00000567643 CUL7Q14999 1698 aa30.01■■■□□ 2.4
POLR2M-208ENST00000567643 KIF27Q86VH2 1401 aa30.01■■■□□ 2.39
POLR2M-208ENST00000567643 ERCC6L2Q5T890 1561 aa29.99■■■□□ 2.39
POLR2M-208ENST00000567643 RUSC2Q8N2Y8 1516 aa29.95■■■□□ 2.38
POLR2M-208ENST00000567643 IGF1RP08069 1367 aa29.93■■■□□ 2.38
POLR2M-208ENST00000567643 PRG4Q92954 1404 aaPredicted RBP29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms