RNA–Protein interactions for RNA: ENST00000567641.5

NUP93-215, Transcript of nucleoporin 93, humanhuman

TSL 4

Gene NUP93, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-215ENST00000567641 NISCHQ9Y2I1 1504 aa18.9■□□□□ 0.62
NUP93-215ENST00000567641 CCDC180Q9P1Z9 1646 aa16.69■□□□□ 0.26
NUP93-215ENST00000567641 ABCC9O60706 1549 aa16.55■□□□□ 0.24
NUP93-215ENST00000567641 DCAF8L2P0C7V8 631 aa16.03■□□□□ 0.16
NUP93-215ENST00000567641 RB1CC1Q8TDY2 1594 aa15.82■□□□□ 0.12
NUP93-215ENST00000567641 NACADO15069 1562 aa15.79■□□□□ 0.12
NUP93-215ENST00000567641 ZCCHC6Q5VYS8 1495 aaKnown RBP15.71■□□□□ 0.11
NUP93-215ENST00000567641 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
NUP93-215ENST00000567641 DCAF1Q9Y4B6 1507 aa15.58■□□□□ 0.09
NUP93-215ENST00000567641 PABPN1Q86U42 306 aaKnown RBP eCLIP15.54■□□□□ 0.08
NUP93-215ENST00000567641 SCRIBQ14160 1630 aa15.33■□□□□ 0.04
NUP93-215ENST00000567641 BICRAQ9NZM4 1560 aa15.32■□□□□ 0.04
NUP93-215ENST00000567641 UNC13AQ9UPW8 1703 aa15.31■□□□□ 0.04
NUP93-215ENST00000567641 DNAJC5BQ9UF47 199 aa15.27■□□□□ 0.04
NUP93-215ENST00000567641 SHROOM4Q9ULL8 1493 aa15.14■□□□□ 0.01
NUP93-215ENST00000567641 EIF4G1Q04637 1599 aaKnown RBP14.94□□□□□ -0.02
NUP93-215ENST00000567641 CC2D2AQ9P2K1 1620 aa14.88□□□□□ -0.03
NUP93-215ENST00000567641 CECR2Q9BXF3 1484 aa14.86□□□□□ -0.03
NUP93-215ENST00000567641 BAZ1AQ9NRL2 1556 aaPredicted RBP14.64□□□□□ -0.07
NUP93-215ENST00000567641 SMARCA4P51532 1647 aa14.63□□□□□ -0.07
NUP93-215ENST00000567641 NCAPD3P42695 1498 aa14.62□□□□□ -0.07
NUP93-215ENST00000567641 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
NUP93-215ENST00000567641 MROH2BQ7Z745 1585 aa14.58□□□□□ -0.08
NUP93-215ENST00000567641 SMARCA2P51531 1590 aa14.57□□□□□ -0.08
NUP93-215ENST00000567641 BAZ1BQ9UIG0 1483 aaKnown RBP14.5□□□□□ -0.09
NUP93-215ENST00000567641 HMGXB3Q12766 1538 aa14.48□□□□□ -0.09
NUP93-215ENST00000567641 PEG3Q9GZU2 1588 aa14.46□□□□□ -0.09
NUP93-215ENST00000567641 RSF1Q96T23 1441 aaPredicted RBP14.43□□□□□ -0.1
NUP93-215ENST00000567641 WIZO95785 1651 aa14.38□□□□□ -0.11
NUP93-215ENST00000567641 NESP48681 1621 aa14.29□□□□□ -0.12
NUP93-215ENST00000567641 ERCC6Q03468 1493 aa14.28□□□□□ -0.12
NUP93-215ENST00000567641 CADPSQ9ULU8 1353 aa14.23□□□□□ -0.13
NUP93-215ENST00000567641 TOP2AP11388 1531 aaKnown RBP14.23□□□□□ -0.13
NUP93-215ENST00000567641 SUPT5HO00267 1087 aaKnown RBP14.19□□□□□ -0.14
NUP93-215ENST00000567641 LAMC3Q9Y6N6 1575 aa14.18□□□□□ -0.14
NUP93-215ENST00000567641 PDS5BQ9NTI5 1447 aa14.17□□□□□ -0.14
NUP93-215ENST00000567641 CCDC88BA6NC98 1476 aa14.12□□□□□ -0.15
NUP93-215ENST00000567641 CFTRP13569 1480 aa14.1□□□□□ -0.15
NUP93-215ENST00000567641 CUX2O14529 1486 aa14.07□□□□□ -0.16
NUP93-215ENST00000567641 FANCD2Q9BXW9 1451 aa14.05□□□□□ -0.16
NUP93-215ENST00000567641 CEP164Q9UPV0 1460 aa14.01□□□□□ -0.17
NUP93-215ENST00000567641 KIF21AQ7Z4S6 1674 aa14□□□□□ -0.17
NUP93-215ENST00000567641 MRC2Q9UBG0 1479 aa13.99□□□□□ -0.17
NUP93-215ENST00000567641 THOC2Q8NI27 1593 aaKnown RBP13.97□□□□□ -0.17
NUP93-215ENST00000567641 WDR62O43379 1518 aa13.9□□□□□ -0.19
NUP93-215ENST00000567641 URB2Q14146 1524 aaKnown RBP13.88□□□□□ -0.19
NUP93-215ENST00000567641 TOPBP1Q92547 1522 aa13.79□□□□□ -0.2
NUP93-215ENST00000567641 ABCC8Q09428 1581 aa13.79□□□□□ -0.2
NUP93-215ENST00000567641 PRDM2Q13029 1718 aa13.78□□□□□ -0.2
NUP93-215ENST00000567641 DNAJC5Q9H3Z4 198 aa13.77□□□□□ -0.21
NUP93-215ENST00000567641 DNMBPQ6XZF7 1577 aa13.74□□□□□ -0.21
NUP93-215ENST00000567641 IFT140Q96RY7 1462 aa13.73□□□□□ -0.21
NUP93-215ENST00000567641 SOGA1O94964 1423 aa13.68□□□□□ -0.22
NUP93-215ENST00000567641 ZNF608Q9ULD9 1512 aaPredicted RBP13.68□□□□□ -0.22
NUP93-215ENST00000567641 POLA1P09884 1462 aaPredicted RBP13.67□□□□□ -0.22
NUP93-215ENST00000567641 CUX1P39880 1505 aa13.66□□□□□ -0.22
NUP93-215ENST00000567641 RAD54L2Q9Y4B4 1467 aa13.66□□□□□ -0.22
NUP93-215ENST00000567641 FGD5Q6ZNL6 1462 aa13.64□□□□□ -0.23
NUP93-215ENST00000567641 AQRO60306 1485 aaKnown RBP eCLIP13.63□□□□□ -0.23
NUP93-215ENST00000567641 TDRD9Q8NDG6 1382 aaKnown RBP13.63□□□□□ -0.23
NUP93-215ENST00000567641 WRNQ14191 1432 aaPredicted RBP eCLIP13.62□□□□□ -0.23
NUP93-215ENST00000567641 OSCARQ8IYS5 282 aa13.61□□□□□ -0.23
NUP93-215ENST00000567641 TARBP1Q13395 1621 aaKnown RBP13.58□□□□□ -0.24
NUP93-215ENST00000567641 FBLN2P98095 1184 aa13.58□□□□□ -0.24
NUP93-215ENST00000567641 EIF4G3O43432 1585 aaKnown RBP13.54□□□□□ -0.24
NUP93-215ENST00000567641 TOP2BQ02880 1626 aa13.51□□□□□ -0.25
NUP93-215ENST00000567641 SYNJ1O43426 1573 aa13.51□□□□□ -0.25
NUP93-215ENST00000567641 CHMP7Q8WUX9 453 aaPredicted RBP13.5□□□□□ -0.25
NUP93-215ENST00000567641 ABCA10Q8WWZ4 1543 aa13.49□□□□□ -0.25
NUP93-215ENST00000567641 GRIN2BQ13224 1484 aa13.48□□□□□ -0.25
NUP93-215ENST00000567641 GAPVD1Q14C86 1478 aa13.48□□□□□ -0.25
NUP93-215ENST00000567641 BIVM-ERCC5R4GMW8 1640 aa13.46□□□□□ -0.25
NUP93-215ENST00000567641 SNAPC4Q5SXM2 1469 aa13.46□□□□□ -0.25
NUP93-215ENST00000567641 WDR97A6NE52 1622 aa13.44□□□□□ -0.26
NUP93-215ENST00000567641 MAGI1Q96QZ7 1491 aaPredicted RBP13.42□□□□□ -0.26
NUP93-215ENST00000567641 SYNJ2O15056 1496 aa13.38□□□□□ -0.27
NUP93-215ENST00000567641 TRIM41Q8WV44 630 aa13.38□□□□□ -0.27
NUP93-215ENST00000567641 ABCA5Q8WWZ7 1642 aa13.38□□□□□ -0.27
NUP93-215ENST00000567641 KIF27Q86VH2 1401 aa13.34□□□□□ -0.27
NUP93-215ENST00000567641 FHAD1B1AJZ9 1412 aa13.33□□□□□ -0.28
NUP93-215ENST00000567641 CHD1O14646 1710 aa13.33□□□□□ -0.28
NUP93-215ENST00000567641 PBRM1Q86U86 1689 aa13.32□□□□□ -0.28
NUP93-215ENST00000567641 ERICH3Q5RHP9 1530 aa13.32□□□□□ -0.28
NUP93-215ENST00000567641 IGF1RP08069 1367 aa13.32□□□□□ -0.28
NUP93-215ENST00000567641 GRIN2AQ12879 1464 aa13.29□□□□□ -0.28
NUP93-215ENST00000567641 CYB5RLQ6IPT4 315 aa13.29□□□□□ -0.28
NUP93-215ENST00000567641 ARHGEF11O15085 1522 aa13.28□□□□□ -0.28
NUP93-215ENST00000567641 ADAMTS12P58397 1594 aa13.26□□□□□ -0.29
NUP93-215ENST00000567641 CARMIL1Q5VZK9 1371 aa13.24□□□□□ -0.29
NUP93-215ENST00000567641 RIMBP3CA6NJZ7 1639 aa13.24□□□□□ -0.29
NUP93-215ENST00000567641 RIMBP3BA6NNM3 1639 aa13.24□□□□□ -0.29
NUP93-215ENST00000567641 RIMBP3Q9UFD9 1639 aa13.24□□□□□ -0.29
NUP93-215ENST00000567641 CLASP1Q7Z460 1538 aa13.23□□□□□ -0.29
NUP93-215ENST00000567641 NUP160Q12769 1436 aa13.22□□□□□ -0.29
NUP93-215ENST00000567641 RUSC2Q8N2Y8 1516 aa13.21□□□□□ -0.29
NUP93-215ENST00000567641 JPH4Q96JJ6 628 aa13.2□□□□□ -0.3
NUP93-215ENST00000567641 CEP170Q5SW79 1584 aa13.2□□□□□ -0.3
NUP93-215ENST00000567641 CHIC1Q5VXU3 224 aa13.17□□□□□ -0.3
NUP93-215ENST00000567641 ARAP1Q96P48 1450 aa13.16□□□□□ -0.3
NUP93-215ENST00000567641 PRG4Q92954 1404 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms