RNA–Protein interactions for RNA: ENST00000567564.1

SGF29-206, Transcript of SAGA complex associated factor 29, humanhuman

TSL 5

Gene SGF29, Length 788 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGF29-206ENST00000567564 NISCHQ9Y2I1 1504 aa41.85■■■■■ 4.29
SGF29-206ENST00000567564 CCDC180Q9P1Z9 1646 aa37.58■■■■□ 3.61
SGF29-206ENST00000567564 ABCC9O60706 1549 aa37.28■■■■□ 3.56
SGF29-206ENST00000567564 RB1CC1Q8TDY2 1594 aa35.63■■■■□ 3.29
SGF29-206ENST00000567564 NACADO15069 1562 aa35.45■■■■□ 3.27
SGF29-206ENST00000567564 MYO15BQ96JP2 1530 aa35.11■■■■□ 3.21
SGF29-206ENST00000567564 DNAJC5BQ9UF47 199 aa34.91■■■■□ 3.18
SGF29-206ENST00000567564 DCAF8L2P0C7V8 631 aa34.88■■■■□ 3.17
SGF29-206ENST00000567564 UNC13AQ9UPW8 1703 aa34.88■■■■□ 3.17
SGF29-206ENST00000567564 ZCCHC6Q5VYS8 1495 aaKnown RBP34.76■■■■□ 3.15
SGF29-206ENST00000567564 DCAF1Q9Y4B6 1507 aa34.68■■■■□ 3.14
SGF29-206ENST00000567564 BICRAQ9NZM4 1560 aa34.67■■■■□ 3.14
SGF29-206ENST00000567564 PABPN1Q86U42 306 aaKnown RBP eCLIP34.64■■■■□ 3.14
SGF29-206ENST00000567564 SHROOM4Q9ULL8 1493 aa34.27■■■■□ 3.08
SGF29-206ENST00000567564 SCRIBQ14160 1630 aa34.1■■■■□ 3.05
SGF29-206ENST00000567564 CC2D2AQ9P2K1 1620 aa33.77■■■■□ 3
SGF29-206ENST00000567564 EIF4G1Q04637 1599 aaKnown RBP33.76■■■□□ 2.99
SGF29-206ENST00000567564 CECR2Q9BXF3 1484 aa33.62■■■□□ 2.97
SGF29-206ENST00000567564 NCAPD3P42695 1498 aa32.74■■■□□ 2.83
SGF29-206ENST00000567564 SMARCA4P51532 1647 aa32.63■■■□□ 2.81
SGF29-206ENST00000567564 ATAD2BQ9ULI0 1458 aa32.62■■■□□ 2.81
SGF29-206ENST00000567564 HMGXB3Q12766 1538 aa32.54■■■□□ 2.8
SGF29-206ENST00000567564 SMARCA2P51531 1590 aa32.53■■■□□ 2.8
SGF29-206ENST00000567564 BAZ1AQ9NRL2 1556 aaPredicted RBP32.47■■■□□ 2.79
SGF29-206ENST00000567564 PEG3Q9GZU2 1588 aa32.42■■■□□ 2.78
SGF29-206ENST00000567564 BAZ1BQ9UIG0 1483 aaKnown RBP32.25■■■□□ 2.75
SGF29-206ENST00000567564 MROH2BQ7Z745 1585 aa32.22■■■□□ 2.75
SGF29-206ENST00000567564 CUX2O14529 1486 aa32.21■■■□□ 2.75
SGF29-206ENST00000567564 ERCC6Q03468 1493 aa32.15■■■□□ 2.74
SGF29-206ENST00000567564 NESP48681 1621 aa32.1■■■□□ 2.73
SGF29-206ENST00000567564 LAMC3Q9Y6N6 1575 aa31.97■■■□□ 2.71
SGF29-206ENST00000567564 DNAJC5Q9H3Z4 198 aa31.96■■■□□ 2.71
SGF29-206ENST00000567564 THOC2Q8NI27 1593 aaKnown RBP31.88■■■□□ 2.69
SGF29-206ENST00000567564 WIZO95785 1651 aa31.82■■■□□ 2.68
SGF29-206ENST00000567564 KIF21AQ7Z4S6 1674 aa31.73■■■□□ 2.67
SGF29-206ENST00000567564 PDS5BQ9NTI5 1447 aa31.69■■■□□ 2.66
SGF29-206ENST00000567564 CADPSQ9ULU8 1353 aa31.67■■■□□ 2.66
SGF29-206ENST00000567564 RSF1Q96T23 1441 aaPredicted RBP31.58■■■□□ 2.65
SGF29-206ENST00000567564 TOP2AP11388 1531 aaKnown RBP31.48■■■□□ 2.63
SGF29-206ENST00000567564 MRC2Q9UBG0 1479 aa31.46■■■□□ 2.63
SGF29-206ENST00000567564 WDR62O43379 1518 aa31.45■■■□□ 2.63
SGF29-206ENST00000567564 CFTRP13569 1480 aa31.4■■■□□ 2.62
SGF29-206ENST00000567564 CEP164Q9UPV0 1460 aa31.33■■■□□ 2.61
SGF29-206ENST00000567564 FANCD2Q9BXW9 1451 aa31.31■■■□□ 2.6
SGF29-206ENST00000567564 PRDM2Q13029 1718 aa31.12■■■□□ 2.57
SGF29-206ENST00000567564 URB2Q14146 1524 aaKnown RBP31.09■■■□□ 2.57
SGF29-206ENST00000567564 CCDC88BA6NC98 1476 aa31.06■■■□□ 2.56
SGF29-206ENST00000567564 TOPBP1Q92547 1522 aa30.76■■■□□ 2.51
SGF29-206ENST00000567564 IFT140Q96RY7 1462 aa30.72■■■□□ 2.51
SGF29-206ENST00000567564 ABCC8Q09428 1581 aa30.68■■■□□ 2.5
SGF29-206ENST00000567564 DNMBPQ6XZF7 1577 aa30.67■■■□□ 2.5
SGF29-206ENST00000567564 ZNF608Q9ULD9 1512 aaPredicted RBP30.65■■■□□ 2.5
SGF29-206ENST00000567564 OSCARQ8IYS5 282 aa30.58■■■□□ 2.49
SGF29-206ENST00000567564 TARBP1Q13395 1621 aaKnown RBP30.54■■■□□ 2.48
SGF29-206ENST00000567564 EIF4G3O43432 1585 aaKnown RBP30.54■■■□□ 2.48
SGF29-206ENST00000567564 POLA1P09884 1462 aaPredicted RBP30.46■■■□□ 2.47
SGF29-206ENST00000567564 TRIM41Q8WV44 630 aa30.42■■■□□ 2.46
SGF29-206ENST00000567564 AQRO60306 1485 aaKnown RBP eCLIP30.34■■■□□ 2.45
SGF29-206ENST00000567564 RIMBP3CA6NJZ7 1639 aa30.3■■■□□ 2.44
SGF29-206ENST00000567564 RIMBP3BA6NNM3 1639 aa30.3■■■□□ 2.44
SGF29-206ENST00000567564 RIMBP3Q9UFD9 1639 aa30.3■■■□□ 2.44
SGF29-206ENST00000567564 CUX1P39880 1505 aa30.28■■■□□ 2.44
SGF29-206ENST00000567564 RAD54L2Q9Y4B4 1467 aa30.28■■■□□ 2.44
SGF29-206ENST00000567564 WDR97A6NE52 1622 aa30.27■■■□□ 2.44
SGF29-206ENST00000567564 FGD5Q6ZNL6 1462 aa30.25■■■□□ 2.43
SGF29-206ENST00000567564 CHD1O14646 1710 aa30.25■■■□□ 2.43
SGF29-206ENST00000567564 ARHGEF11O15085 1522 aa30.23■■■□□ 2.43
SGF29-206ENST00000567564 SOGA1O94964 1423 aa30.22■■■□□ 2.43
SGF29-206ENST00000567564 TDRD9Q8NDG6 1382 aaKnown RBP30.13■■■□□ 2.41
SGF29-206ENST00000567564 SNAPC4Q5SXM2 1469 aa30.06■■■□□ 2.4
SGF29-206ENST00000567564 MAGI1Q96QZ7 1491 aaPredicted RBP30.05■■■□□ 2.4
SGF29-206ENST00000567564 GRIN2BQ13224 1484 aa30.01■■■□□ 2.4
SGF29-206ENST00000567564 SUPT5HO00267 1087 aaKnown RBP29.99■■■□□ 2.39
SGF29-206ENST00000567564 CLASP1Q7Z460 1538 aa29.99■■■□□ 2.39
SGF29-206ENST00000567564 ABCA10Q8WWZ4 1543 aa29.97■■■□□ 2.39
SGF29-206ENST00000567564 ABCA5Q8WWZ7 1642 aa29.96■■■□□ 2.39
SGF29-206ENST00000567564 ARAP1Q96P48 1450 aa29.94■■■□□ 2.38
SGF29-206ENST00000567564 PBRM1Q86U86 1689 aa29.94■■■□□ 2.38
SGF29-206ENST00000567564 FBLN2P98095 1184 aa29.92■■■□□ 2.38
SGF29-206ENST00000567564 SYNJ2O15056 1496 aa29.92■■■□□ 2.38
SGF29-206ENST00000567564 GAPVD1Q14C86 1478 aa29.9■■■□□ 2.38
SGF29-206ENST00000567564 SYNJ1O43426 1573 aa29.89■■■□□ 2.38
SGF29-206ENST00000567564 BIVM-ERCC5R4GMW8 1640 aa29.87■■■□□ 2.37
SGF29-206ENST00000567564 TOP2BQ02880 1626 aa29.84■■■□□ 2.37
SGF29-206ENST00000567564 CYB5RLQ6IPT4 315 aa29.81■■■□□ 2.36
SGF29-206ENST00000567564 CHMP7Q8WUX9 453 aaPredicted RBP29.8■■■□□ 2.36
SGF29-206ENST00000567564 WRNQ14191 1432 aaPredicted RBP eCLIP29.78■■■□□ 2.36
SGF29-206ENST00000567564 ADAMTS12P58397 1594 aa29.69■■■□□ 2.34
SGF29-206ENST00000567564 GRIN2AQ12879 1464 aa29.66■■■□□ 2.34
SGF29-206ENST00000567564 NUP160Q12769 1436 aa29.6■■■□□ 2.33
SGF29-206ENST00000567564 ERICH3Q5RHP9 1530 aa29.6■■■□□ 2.33
SGF29-206ENST00000567564 CEP170Q5SW79 1584 aa29.56■■■□□ 2.32
SGF29-206ENST00000567564 FHAD1B1AJZ9 1412 aa29.54■■■□□ 2.32
SGF29-206ENST00000567564 SHROOM2Q13796 1616 aa29.49■■■□□ 2.31
SGF29-206ENST00000567564 ERCC6L2Q5T890 1561 aa29.46■■■□□ 2.31
SGF29-206ENST00000567564 TRHP20396 242 aaPredicted RBP29.35■■■□□ 2.29
SGF29-206ENST00000567564 RUSC2Q8N2Y8 1516 aa29.29■■■□□ 2.28
SGF29-206ENST00000567564 PRG4Q92954 1404 aaPredicted RBP29.18■■■□□ 2.26
SGF29-206ENST00000567564 IGF1RP08069 1367 aa29.17■■■□□ 2.26
SGF29-206ENST00000567564 CUL7Q14999 1698 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms