RNA–Protein interactions for RNA: ENST00000567539.5

MTHFSD-215, Transcript of methenyltetrahydrofolate synthetase domain containing, humanhuman

TSL 4

Gene MTHFSD, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFSD-215ENST00000567539 NISCHQ9Y2I1 1504 aa29.94■■■□□ 2.38
MTHFSD-215ENST00000567539 ABCC9O60706 1549 aa27.32■■□□□ 1.96
MTHFSD-215ENST00000567539 CCDC180Q9P1Z9 1646 aa26.99■■□□□ 1.91
MTHFSD-215ENST00000567539 DNAJC5BQ9UF47 199 aa25.92■■□□□ 1.74
MTHFSD-215ENST00000567539 RB1CC1Q8TDY2 1594 aa25.87■■□□□ 1.73
MTHFSD-215ENST00000567539 NACADO15069 1562 aa25.63■■□□□ 1.69
MTHFSD-215ENST00000567539 DCAF8L2P0C7V8 631 aa25.41■■□□□ 1.66
MTHFSD-215ENST00000567539 PABPN1Q86U42 306 aaKnown RBP eCLIP25.39■■□□□ 1.66
MTHFSD-215ENST00000567539 MYO15BQ96JP2 1530 aa25.2■■□□□ 1.62
MTHFSD-215ENST00000567539 UNC13AQ9UPW8 1703 aa25.17■■□□□ 1.62
MTHFSD-215ENST00000567539 BICRAQ9NZM4 1560 aa25.1■■□□□ 1.61
MTHFSD-215ENST00000567539 SHROOM4Q9ULL8 1493 aa24.82■■□□□ 1.56
MTHFSD-215ENST00000567539 ZCCHC6Q5VYS8 1495 aaKnown RBP24.75■■□□□ 1.55
MTHFSD-215ENST00000567539 DCAF1Q9Y4B6 1507 aa24.74■■□□□ 1.55
MTHFSD-215ENST00000567539 CECR2Q9BXF3 1484 aa24.67■■□□□ 1.54
MTHFSD-215ENST00000567539 CC2D2AQ9P2K1 1620 aa24.64■■□□□ 1.54
MTHFSD-215ENST00000567539 SCRIBQ14160 1630 aa24.55■■□□□ 1.52
MTHFSD-215ENST00000567539 EIF4G1Q04637 1599 aaKnown RBP24.54■■□□□ 1.52
MTHFSD-215ENST00000567539 DNAJC5Q9H3Z4 198 aa24.09■■□□□ 1.45
MTHFSD-215ENST00000567539 CUX2O14529 1486 aa23.73■■□□□ 1.39
MTHFSD-215ENST00000567539 NCAPD3P42695 1498 aa23.68■■□□□ 1.38
MTHFSD-215ENST00000567539 ERCC6Q03468 1493 aa23.64■■□□□ 1.38
MTHFSD-215ENST00000567539 ATAD2BQ9ULI0 1458 aa23.55■■□□□ 1.36
MTHFSD-215ENST00000567539 SMARCA2P51531 1590 aa23.46■■□□□ 1.35
MTHFSD-215ENST00000567539 HMGXB3Q12766 1538 aa23.46■■□□□ 1.35
MTHFSD-215ENST00000567539 SMARCA4P51532 1647 aa23.41■■□□□ 1.34
MTHFSD-215ENST00000567539 NESP48681 1621 aa23.36■■□□□ 1.33
MTHFSD-215ENST00000567539 BAZ1BQ9UIG0 1483 aaKnown RBP23.3■■□□□ 1.32
MTHFSD-215ENST00000567539 BAZ1AQ9NRL2 1556 aaPredicted RBP23.27■■□□□ 1.32
MTHFSD-215ENST00000567539 PEG3Q9GZU2 1588 aa23.22■■□□□ 1.31
MTHFSD-215ENST00000567539 THOC2Q8NI27 1593 aaKnown RBP23.19■■□□□ 1.3
MTHFSD-215ENST00000567539 LAMC3Q9Y6N6 1575 aa23.18■■□□□ 1.3
MTHFSD-215ENST00000567539 PDS5BQ9NTI5 1447 aa23.08■■□□□ 1.29
MTHFSD-215ENST00000567539 MROH2BQ7Z745 1585 aa23.05■■□□□ 1.28
MTHFSD-215ENST00000567539 KIF21AQ7Z4S6 1674 aa23.01■■□□□ 1.27
MTHFSD-215ENST00000567539 CADPSQ9ULU8 1353 aa22.95■■□□□ 1.26
MTHFSD-215ENST00000567539 MRC2Q9UBG0 1479 aa22.89■■□□□ 1.25
MTHFSD-215ENST00000567539 TRIM41Q8WV44 630 aa22.87■■□□□ 1.25
MTHFSD-215ENST00000567539 WDR62O43379 1518 aa22.83■■□□□ 1.25
MTHFSD-215ENST00000567539 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
MTHFSD-215ENST00000567539 WIZO95785 1651 aa22.72■■□□□ 1.23
MTHFSD-215ENST00000567539 FANCD2Q9BXW9 1451 aa22.66■■□□□ 1.22
MTHFSD-215ENST00000567539 CFTRP13569 1480 aa22.61■■□□□ 1.21
MTHFSD-215ENST00000567539 OSCARQ8IYS5 282 aa22.6■■□□□ 1.21
MTHFSD-215ENST00000567539 URB2Q14146 1524 aaKnown RBP22.48■■□□□ 1.19
MTHFSD-215ENST00000567539 RSF1Q96T23 1441 aaPredicted RBP22.48■■□□□ 1.19
MTHFSD-215ENST00000567539 TOP2AP11388 1531 aaKnown RBP22.46■■□□□ 1.19
MTHFSD-215ENST00000567539 IFT140Q96RY7 1462 aa22.29■■□□□ 1.16
MTHFSD-215ENST00000567539 RIMBP3CA6NJZ7 1639 aa22.28■■□□□ 1.16
MTHFSD-215ENST00000567539 RIMBP3BA6NNM3 1639 aa22.28■■□□□ 1.16
MTHFSD-215ENST00000567539 RIMBP3Q9UFD9 1639 aa22.28■■□□□ 1.16
MTHFSD-215ENST00000567539 ZNF608Q9ULD9 1512 aaPredicted RBP22.26■■□□□ 1.15
MTHFSD-215ENST00000567539 PRDM2Q13029 1718 aa22.26■■□□□ 1.15
MTHFSD-215ENST00000567539 CCDC88BA6NC98 1476 aa22.21■■□□□ 1.15
MTHFSD-215ENST00000567539 ARHGEF11O15085 1522 aa22.2■■□□□ 1.14
MTHFSD-215ENST00000567539 TOPBP1Q92547 1522 aa22.19■■□□□ 1.14
MTHFSD-215ENST00000567539 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
MTHFSD-215ENST00000567539 EIF4G3O43432 1585 aaKnown RBP22.11■■□□□ 1.13
MTHFSD-215ENST00000567539 DNMBPQ6XZF7 1577 aa22.08■■□□□ 1.12
MTHFSD-215ENST00000567539 CYB5RLQ6IPT4 315 aa22.06■■□□□ 1.12
MTHFSD-215ENST00000567539 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.12
MTHFSD-215ENST00000567539 TARBP1Q13395 1621 aaKnown RBP22■■□□□ 1.11
MTHFSD-215ENST00000567539 CHD1O14646 1710 aa21.96■■□□□ 1.11
MTHFSD-215ENST00000567539 ARAP1Q96P48 1450 aa21.96■■□□□ 1.11
MTHFSD-215ENST00000567539 FBLN2P98095 1184 aa21.95■■□□□ 1.1
MTHFSD-215ENST00000567539 POLA1P09884 1462 aaPredicted RBP21.95■■□□□ 1.1
MTHFSD-215ENST00000567539 TRHP20396 242 aaPredicted RBP21.93■■□□□ 1.1
MTHFSD-215ENST00000567539 RAD54L2Q9Y4B4 1467 aa21.86■■□□□ 1.09
MTHFSD-215ENST00000567539 SOGA1O94964 1423 aa21.86■■□□□ 1.09
MTHFSD-215ENST00000567539 TDRD9Q8NDG6 1382 aaKnown RBP21.85■■□□□ 1.09
MTHFSD-215ENST00000567539 WDR97A6NE52 1622 aa21.8■■□□□ 1.08
MTHFSD-215ENST00000567539 SNAPC4Q5SXM2 1469 aa21.79■■□□□ 1.08
MTHFSD-215ENST00000567539 CLASP1Q7Z460 1538 aa21.76■■□□□ 1.07
MTHFSD-215ENST00000567539 CHMP7Q8WUX9 453 aaPredicted RBP21.76■■□□□ 1.07
MTHFSD-215ENST00000567539 FGD5Q6ZNL6 1462 aa21.76■■□□□ 1.07
MTHFSD-215ENST00000567539 MAGI1Q96QZ7 1491 aaPredicted RBP21.74■■□□□ 1.07
MTHFSD-215ENST00000567539 SYNJ1O43426 1573 aa21.73■■□□□ 1.07
MTHFSD-215ENST00000567539 GRIN2BQ13224 1484 aa21.71■■□□□ 1.07
MTHFSD-215ENST00000567539 SYNJ2O15056 1496 aa21.68■■□□□ 1.06
MTHFSD-215ENST00000567539 CUX1P39880 1505 aa21.67■■□□□ 1.06
MTHFSD-215ENST00000567539 GAPVD1Q14C86 1478 aa21.58■■□□□ 1.04
MTHFSD-215ENST00000567539 AEBP2Q6ZN18 517 aaPredicted RBP21.56■■□□□ 1.04
MTHFSD-215ENST00000567539 PBRM1Q86U86 1689 aa21.52■■□□□ 1.04
MTHFSD-215ENST00000567539 ABCA10Q8WWZ4 1543 aa21.51■■□□□ 1.03
MTHFSD-215ENST00000567539 ABCA5Q8WWZ7 1642 aa21.47■■□□□ 1.03
MTHFSD-215ENST00000567539 GRIN2AQ12879 1464 aa21.42■■□□□ 1.02
MTHFSD-215ENST00000567539 NUP160Q12769 1436 aa21.38■■□□□ 1.01
MTHFSD-215ENST00000567539 WRNQ14191 1432 aaPredicted RBP eCLIP21.38■■□□□ 1.01
MTHFSD-215ENST00000567539 ERCC6L2Q5T890 1561 aa21.37■■□□□ 1.01
MTHFSD-215ENST00000567539 ADAMTS12P58397 1594 aa21.34■■□□□ 1.01
MTHFSD-215ENST00000567539 CEP170Q5SW79 1584 aa21.34■■□□□ 1.01
MTHFSD-215ENST00000567539 FHAD1B1AJZ9 1412 aa21.3■■□□□ 1
MTHFSD-215ENST00000567539 SHROOM2Q13796 1616 aa21.27■■□□□ 1
MTHFSD-215ENST00000567539 TOP2BQ02880 1626 aa21.24■□□□□ 0.99
MTHFSD-215ENST00000567539 ERICH3Q5RHP9 1530 aa21.24■□□□□ 0.99
MTHFSD-215ENST00000567539 BIVM-ERCC5R4GMW8 1640 aa21.22■□□□□ 0.99
MTHFSD-215ENST00000567539 SUPT5HO00267 1087 aaKnown RBP21.21■□□□□ 0.99
MTHFSD-215ENST00000567539 PRG4Q92954 1404 aaPredicted RBP21.19■□□□□ 0.98
MTHFSD-215ENST00000567539 JPH4Q96JJ6 628 aa21.15■□□□□ 0.98
MTHFSD-215ENST00000567539 KIF13AQ9H1H9 1805 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms