RNA–Protein interactions for RNA: ENST00000567437.1

SNUPN-208, Transcript of snurportin 1, humanhuman

TSL 2

Gene SNUPN, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-208ENST00000567437 AEBP2Q6ZN18 517 aaPredicted RBP22.68■■□□□ 1.22
SNUPN-208ENST00000567437 CHIC1Q5VXU3 224 aa21.56■■□□□ 1.04
SNUPN-208ENST00000567437 NISCHQ9Y2I1 1504 aa20.51■□□□□ 0.87
SNUPN-208ENST00000567437 SENP3Q9H4L4 574 aaPredicted RBP19.44■□□□□ 0.7
SNUPN-208ENST00000567437 ABCC9O60706 1549 aa19.35■□□□□ 0.69
SNUPN-208ENST00000567437 PHF23Q9BUL5 403 aaPredicted RBP19.14■□□□□ 0.65
SNUPN-208ENST00000567437 CCDC180Q9P1Z9 1646 aa18.79■□□□□ 0.6
SNUPN-208ENST00000567437 DNAJC5BQ9UF47 199 aa18.72■□□□□ 0.59
SNUPN-208ENST00000567437 RB1CC1Q8TDY2 1594 aa18.21■□□□□ 0.51
SNUPN-208ENST00000567437 FOXD1Q16676 465 aa18.07■□□□□ 0.48
SNUPN-208ENST00000567437 NACADO15069 1562 aa17.91■□□□□ 0.46
SNUPN-208ENST00000567437 PABPN1Q86U42 306 aaKnown RBP eCLIP17.84■□□□□ 0.45
SNUPN-208ENST00000567437 DNAJC5Q9H3Z4 198 aa17.81■□□□□ 0.44
SNUPN-208ENST00000567437 UNC13AQ9UPW8 1703 aa17.75■□□□□ 0.43
SNUPN-208ENST00000567437 BICRAQ9NZM4 1560 aa17.65■□□□□ 0.42
SNUPN-208ENST00000567437 DCAF8L2P0C7V8 631 aa17.58■□□□□ 0.4
SNUPN-208ENST00000567437 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
SNUPN-208ENST00000567437 CC2D2AQ9P2K1 1620 aa17.5■□□□□ 0.39
SNUPN-208ENST00000567437 SHROOM4Q9ULL8 1493 aa17.49■□□□□ 0.39
SNUPN-208ENST00000567437 MYO15BQ96JP2 1530 aa17.47■□□□□ 0.39
SNUPN-208ENST00000567437 EIF4G1Q04637 1599 aaKnown RBP17.3■□□□□ 0.36
SNUPN-208ENST00000567437 PLPPR3Q6T4P5 718 aa17.25■□□□□ 0.35
SNUPN-208ENST00000567437 CUX2O14529 1486 aa17.09■□□□□ 0.33
SNUPN-208ENST00000567437 SCRIBQ14160 1630 aa17.06■□□□□ 0.32
SNUPN-208ENST00000567437 MSH5O43196 834 aa16.99■□□□□ 0.31
SNUPN-208ENST00000567437 DCAF1Q9Y4B6 1507 aa16.96■□□□□ 0.31
SNUPN-208ENST00000567437 PIAS4Q8N2W9 510 aaPredicted RBP16.92■□□□□ 0.3
SNUPN-208ENST00000567437 ZCCHC6Q5VYS8 1495 aaKnown RBP16.9■□□□□ 0.3
SNUPN-208ENST00000567437 PPP6R1Q9UPN7 881 aa16.83■□□□□ 0.28
SNUPN-208ENST00000567437 ERCC6Q03468 1493 aa16.81■□□□□ 0.28
SNUPN-208ENST00000567437 ADRA2BP18089 450 aa16.81■□□□□ 0.28
SNUPN-208ENST00000567437 TRIM41Q8WV44 630 aa16.65■□□□□ 0.26
SNUPN-208ENST00000567437 POTEDQ86YR6 584 aa16.57■□□□□ 0.24
SNUPN-208ENST00000567437 NCAPD3P42695 1498 aa16.51■□□□□ 0.23
SNUPN-208ENST00000567437 THOC2Q8NI27 1593 aaKnown RBP16.47■□□□□ 0.23
SNUPN-208ENST00000567437 NESP48681 1621 aa16.41■□□□□ 0.22
SNUPN-208ENST00000567437 HMGXB3Q12766 1538 aa16.36■□□□□ 0.21
SNUPN-208ENST00000567437 ATAD2BQ9ULI0 1458 aa16.33■□□□□ 0.2
SNUPN-208ENST00000567437 SMARCA2P51531 1590 aa16.3■□□□□ 0.2
SNUPN-208ENST00000567437 LAMC3Q9Y6N6 1575 aa16.29■□□□□ 0.2
SNUPN-208ENST00000567437 KIF21AQ7Z4S6 1674 aa16.22■□□□□ 0.19
SNUPN-208ENST00000567437 PDS5BQ9NTI5 1447 aa16.19■□□□□ 0.18
SNUPN-208ENST00000567437 BAZ1AQ9NRL2 1556 aaPredicted RBP16.19■□□□□ 0.18
SNUPN-208ENST00000567437 SMARCA4P51532 1647 aa16.16■□□□□ 0.18
SNUPN-208ENST00000567437 BAZ1BQ9UIG0 1483 aaKnown RBP16.15■□□□□ 0.18
SNUPN-208ENST00000567437 WDR62O43379 1518 aa16.1■□□□□ 0.17
SNUPN-208ENST00000567437 OSCARQ8IYS5 282 aa16.1■□□□□ 0.17
SNUPN-208ENST00000567437 MRC2Q9UBG0 1479 aa16.1■□□□□ 0.17
SNUPN-208ENST00000567437 PEG3Q9GZU2 1588 aa16.05■□□□□ 0.16
SNUPN-208ENST00000567437 RIMBP3CA6NJZ7 1639 aa16■□□□□ 0.15
SNUPN-208ENST00000567437 RIMBP3BA6NNM3 1639 aa16■□□□□ 0.15
SNUPN-208ENST00000567437 RIMBP3Q9UFD9 1639 aa16■□□□□ 0.15
SNUPN-208ENST00000567437 CADPSQ9ULU8 1353 aa15.95■□□□□ 0.14
SNUPN-208ENST00000567437 ARHGEF11O15085 1522 aa15.89■□□□□ 0.13
SNUPN-208ENST00000567437 CEP164Q9UPV0 1460 aa15.88■□□□□ 0.13
SNUPN-208ENST00000567437 MROH2BQ7Z745 1585 aa15.86■□□□□ 0.13
SNUPN-208ENST00000567437 TRHP20396 242 aaPredicted RBP15.78■□□□□ 0.12
SNUPN-208ENST00000567437 FANCD2Q9BXW9 1451 aa15.78■□□□□ 0.12
SNUPN-208ENST00000567437 CYB5RLQ6IPT4 315 aa15.72■□□□□ 0.11
SNUPN-208ENST00000567437 WIZO95785 1651 aa15.7■□□□□ 0.1
SNUPN-208ENST00000567437 URB2Q14146 1524 aaKnown RBP15.67■□□□□ 0.1
SNUPN-208ENST00000567437 ARAP1Q96P48 1450 aa15.65■□□□□ 0.1
SNUPN-208ENST00000567437 CFTRP13569 1480 aa15.64■□□□□ 0.09
SNUPN-208ENST00000567437 IFT140Q96RY7 1462 aa15.6■□□□□ 0.09
SNUPN-208ENST00000567437 RSF1Q96T23 1441 aaPredicted RBP15.6■□□□□ 0.09
SNUPN-208ENST00000567437 ZNF608Q9ULD9 1512 aaPredicted RBP15.58■□□□□ 0.08
SNUPN-208ENST00000567437 CHD1O14646 1710 aa15.52■□□□□ 0.08
SNUPN-208ENST00000567437 EIF4G3O43432 1585 aaKnown RBP15.52■□□□□ 0.07
SNUPN-208ENST00000567437 PRDM2Q13029 1718 aa15.48■□□□□ 0.07
SNUPN-208ENST00000567437 SCAF1Q9H7N4 1312 aaKnown RBP15.47■□□□□ 0.07
SNUPN-208ENST00000567437 MAPK8IP2Q13387 824 aaPredicted RBP15.43■□□□□ 0.06
SNUPN-208ENST00000567437 TOPBP1Q92547 1522 aa15.39■□□□□ 0.05
SNUPN-208ENST00000567437 DMRT2Q9Y5R5 561 aa15.39■□□□□ 0.05
SNUPN-208ENST00000567437 ABCC8Q09428 1581 aa15.37■□□□□ 0.05
SNUPN-208ENST00000567437 TOP2AP11388 1531 aaKnown RBP15.37■□□□□ 0.05
SNUPN-208ENST00000567437 CLASP1Q7Z460 1538 aa15.35■□□□□ 0.05
SNUPN-208ENST00000567437 TARBP1Q13395 1621 aaKnown RBP15.33■□□□□ 0.04
SNUPN-208ENST00000567437 FBLN2P98095 1184 aa15.33■□□□□ 0.04
SNUPN-208ENST00000567437 AQRO60306 1485 aaKnown RBP eCLIP15.33■□□□□ 0.04
SNUPN-208ENST00000567437 DNMBPQ6XZF7 1577 aa15.3■□□□□ 0.04
SNUPN-208ENST00000567437 ILDR1Q86SU0 546 aaPredicted RBP15.3■□□□□ 0.04
SNUPN-208ENST00000567437 SYNJ1O43426 1573 aa15.29■□□□□ 0.04
SNUPN-208ENST00000567437 WDR97A6NE52 1622 aa15.23■□□□□ 0.03
SNUPN-208ENST00000567437 CCDC88BA6NC98 1476 aa15.21■□□□□ 0.03
SNUPN-208ENST00000567437 GAPVD1Q14C86 1478 aa15.21■□□□□ 0.03
SNUPN-208ENST00000567437 SNAPC4Q5SXM2 1469 aa15.2■□□□□ 0.02
SNUPN-208ENST00000567437 POLA1P09884 1462 aaPredicted RBP15.19■□□□□ 0.02
SNUPN-208ENST00000567437 MAGI1Q96QZ7 1491 aaPredicted RBP15.18■□□□□ 0.02
SNUPN-208ENST00000567437 RAD54L2Q9Y4B4 1467 aa15.15■□□□□ 0.02
SNUPN-208ENST00000567437 CHMP7Q8WUX9 453 aaPredicted RBP15.15■□□□□ 0.02
SNUPN-208ENST00000567437 TDRD9Q8NDG6 1382 aaKnown RBP15.13■□□□□ 0.01
SNUPN-208ENST00000567437 SYNJ2O15056 1496 aa15.12■□□□□ 0.01
SNUPN-208ENST00000567437 PPP4R3CPQ6ZMV5 832 aa15.09■□□□□ 0.01
SNUPN-208ENST00000567437 GRIN2BQ13224 1484 aa15.08■□□□□ 0.01
SNUPN-208ENST00000567437 KIF13AQ9H1H9 1805 aa15.08■□□□□ 0.01
SNUPN-208ENST00000567437 SOGA1O94964 1423 aa15.08■□□□□ 0
SNUPN-208ENST00000567437 KDM4FA0A1W2PPD8 638 aa15.01□□□□□ -0.01
SNUPN-208ENST00000567437 FGD5Q6ZNL6 1462 aa15.01□□□□□ -0.01
SNUPN-208ENST00000567437 PBRM1Q86U86 1689 aa15□□□□□ -0.01
SNUPN-208ENST00000567437 ERCC6L2Q5T890 1561 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms