RNA–Protein interactions for RNA: ENST00000567294.5

HSDL1-206, Transcript of hydroxysteroid dehydrogenase like 1, humanhuman

TSL 2

Gene HSDL1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSDL1-206ENST00000567294 NISCHQ9Y2I1 1504 aa61.46■■■■■ 7.43
HSDL1-206ENST00000567294 CCDC180Q9P1Z9 1646 aa54.94■■■■■ 6.39
HSDL1-206ENST00000567294 ABCC9O60706 1549 aa54.18■■■■■ 6.26
HSDL1-206ENST00000567294 RB1CC1Q8TDY2 1594 aa51.87■■■■■ 5.89
HSDL1-206ENST00000567294 NACADO15069 1562 aa51.66■■■■■ 5.86
HSDL1-206ENST00000567294 DCAF8L2P0C7V8 631 aa51.45■■■■■ 5.83
HSDL1-206ENST00000567294 MYO15BQ96JP2 1530 aa51.16■■■■■ 5.78
HSDL1-206ENST00000567294 ZCCHC6Q5VYS8 1495 aaKnown RBP51.13■■■■■ 5.78
HSDL1-206ENST00000567294 UNC13AQ9UPW8 1703 aa50.9■■■■■ 5.74
HSDL1-206ENST00000567294 DCAF1Q9Y4B6 1507 aa50.79■■■■■ 5.72
HSDL1-206ENST00000567294 PABPN1Q86U42 306 aaKnown RBP eCLIP50.48■■■■■ 5.67
HSDL1-206ENST00000567294 BICRAQ9NZM4 1560 aa50.4■■■■■ 5.66
HSDL1-206ENST00000567294 SCRIBQ14160 1630 aa50.13■■■■■ 5.62
HSDL1-206ENST00000567294 DNAJC5BQ9UF47 199 aa50.11■■■■■ 5.61
HSDL1-206ENST00000567294 SHROOM4Q9ULL8 1493 aa49.69■■■■■ 5.55
HSDL1-206ENST00000567294 EIF4G1Q04637 1599 aaKnown RBP49.08■■■■■ 5.45
HSDL1-206ENST00000567294 CC2D2AQ9P2K1 1620 aa49.01■■■■■ 5.44
HSDL1-206ENST00000567294 CECR2Q9BXF3 1484 aa48.69■■■■■ 5.39
HSDL1-206ENST00000567294 SMARCA4P51532 1647 aa47.86■■■■■ 5.25
HSDL1-206ENST00000567294 BAZ1AQ9NRL2 1556 aaPredicted RBP47.67■■■■■ 5.22
HSDL1-206ENST00000567294 NCAPD3P42695 1498 aa47.64■■■■■ 5.22
HSDL1-206ENST00000567294 ATAD2BQ9ULI0 1458 aa47.64■■■■■ 5.22
HSDL1-206ENST00000567294 SMARCA2P51531 1590 aa47.56■■■■■ 5.2
HSDL1-206ENST00000567294 HMGXB3Q12766 1538 aa47.45■■■■■ 5.19
HSDL1-206ENST00000567294 MROH2BQ7Z745 1585 aa47.41■■■■■ 5.18
HSDL1-206ENST00000567294 PEG3Q9GZU2 1588 aa47.35■■■■■ 5.17
HSDL1-206ENST00000567294 BAZ1BQ9UIG0 1483 aaKnown RBP47.24■■■■■ 5.15
HSDL1-206ENST00000567294 WIZO95785 1651 aa46.93■■■■■ 5.1
HSDL1-206ENST00000567294 NESP48681 1621 aa46.77■■■■■ 5.08
HSDL1-206ENST00000567294 ERCC6Q03468 1493 aa46.7■■■■■ 5.07
HSDL1-206ENST00000567294 RSF1Q96T23 1441 aaPredicted RBP46.62■■■■■ 5.05
HSDL1-206ENST00000567294 LAMC3Q9Y6N6 1575 aa46.53■■■■■ 5.04
HSDL1-206ENST00000567294 CUX2O14529 1486 aa46.36■■■■■ 5.01
HSDL1-206ENST00000567294 TOP2AP11388 1531 aaKnown RBP46.33■■■■■ 5.01
HSDL1-206ENST00000567294 KIF21AQ7Z4S6 1674 aa46.3■■■■■ 5
HSDL1-206ENST00000567294 THOC2Q8NI27 1593 aaKnown RBP46.22■■■■■ 4.99
HSDL1-206ENST00000567294 CADPSQ9ULU8 1353 aa46.22■■■■■ 4.99
HSDL1-206ENST00000567294 PDS5BQ9NTI5 1447 aa46.15■■■■■ 4.98
HSDL1-206ENST00000567294 CFTRP13569 1480 aa45.87■■■■■ 4.93
HSDL1-206ENST00000567294 MRC2Q9UBG0 1479 aa45.79■■■■■ 4.92
HSDL1-206ENST00000567294 CCDC88BA6NC98 1476 aa45.75■■■■■ 4.91
HSDL1-206ENST00000567294 FANCD2Q9BXW9 1451 aa45.75■■■■■ 4.91
HSDL1-206ENST00000567294 CEP164Q9UPV0 1460 aa45.75■■■■■ 4.91
HSDL1-206ENST00000567294 PRDM2Q13029 1718 aa45.69■■■■■ 4.91
HSDL1-206ENST00000567294 WDR62O43379 1518 aa45.68■■■■■ 4.9
HSDL1-206ENST00000567294 DNAJC5Q9H3Z4 198 aa45.42■■■■■ 4.86
HSDL1-206ENST00000567294 URB2Q14146 1524 aaKnown RBP45.37■■■■■ 4.85
HSDL1-206ENST00000567294 SUPT5HO00267 1087 aaKnown RBP45.04■■■■■ 4.8
HSDL1-206ENST00000567294 TOPBP1Q92547 1522 aa44.99■■■■■ 4.79
HSDL1-206ENST00000567294 DNMBPQ6XZF7 1577 aa44.92■■■■■ 4.78
HSDL1-206ENST00000567294 ABCC8Q09428 1581 aa44.85■■■■■ 4.77
HSDL1-206ENST00000567294 IFT140Q96RY7 1462 aa44.78■■■■■ 4.76
HSDL1-206ENST00000567294 ZNF608Q9ULD9 1512 aaPredicted RBP44.69■■■■■ 4.74
HSDL1-206ENST00000567294 TARBP1Q13395 1621 aaKnown RBP44.58■■■■■ 4.73
HSDL1-206ENST00000567294 POLA1P09884 1462 aaPredicted RBP44.58■■■■■ 4.73
HSDL1-206ENST00000567294 EIF4G3O43432 1585 aaKnown RBP44.56■■■■■ 4.72
HSDL1-206ENST00000567294 CUX1P39880 1505 aa44.5■■■■■ 4.71
HSDL1-206ENST00000567294 FGD5Q6ZNL6 1462 aa44.41■■■■■ 4.7
HSDL1-206ENST00000567294 RAD54L2Q9Y4B4 1467 aa44.4■■■■■ 4.7
HSDL1-206ENST00000567294 AQRO60306 1485 aaKnown RBP eCLIP44.34■■■■■ 4.69
HSDL1-206ENST00000567294 SOGA1O94964 1423 aa44.31■■■■■ 4.68
HSDL1-206ENST00000567294 OSCARQ8IYS5 282 aa44.25■■■■■ 4.67
HSDL1-206ENST00000567294 WDR97A6NE52 1622 aa44.18■■■■■ 4.66
HSDL1-206ENST00000567294 TDRD9Q8NDG6 1382 aaKnown RBP44.15■■■■■ 4.66
HSDL1-206ENST00000567294 CHD1O14646 1710 aa44.14■■■■■ 4.66
HSDL1-206ENST00000567294 BIVM-ERCC5R4GMW8 1640 aa44.03■■■■■ 4.64
HSDL1-206ENST00000567294 SYNJ1O43426 1573 aa44.01■■■■■ 4.64
HSDL1-206ENST00000567294 TOP2BQ02880 1626 aa43.99■■■■■ 4.63
HSDL1-206ENST00000567294 WRNQ14191 1432 aaPredicted RBP eCLIP43.97■■■■■ 4.63
HSDL1-206ENST00000567294 SNAPC4Q5SXM2 1469 aa43.96■■■■■ 4.63
HSDL1-206ENST00000567294 PBRM1Q86U86 1689 aa43.94■■■■■ 4.62
HSDL1-206ENST00000567294 ABCA10Q8WWZ4 1543 aa43.92■■■■■ 4.62
HSDL1-206ENST00000567294 GRIN2BQ13224 1484 aa43.88■■■■■ 4.61
HSDL1-206ENST00000567294 ABCA5Q8WWZ7 1642 aa43.88■■■■■ 4.61
HSDL1-206ENST00000567294 FBLN2P98095 1184 aa43.83■■■■■ 4.61
HSDL1-206ENST00000567294 GAPVD1Q14C86 1478 aa43.83■■■■■ 4.61
HSDL1-206ENST00000567294 MAGI1Q96QZ7 1491 aaPredicted RBP43.83■■■■■ 4.61
HSDL1-206ENST00000567294 RIMBP3CA6NJZ7 1639 aa43.81■■■■■ 4.6
HSDL1-206ENST00000567294 RIMBP3BA6NNM3 1639 aa43.81■■■■■ 4.6
HSDL1-206ENST00000567294 RIMBP3Q9UFD9 1639 aa43.81■■■■■ 4.6
HSDL1-206ENST00000567294 TRIM41Q8WV44 630 aa43.79■■■■■ 4.6
HSDL1-206ENST00000567294 ARHGEF11O15085 1522 aa43.69■■■■■ 4.59
HSDL1-206ENST00000567294 SYNJ2O15056 1496 aa43.66■■■■■ 4.58
HSDL1-206ENST00000567294 CHMP7Q8WUX9 453 aaPredicted RBP43.6■■■■■ 4.57
HSDL1-206ENST00000567294 CLASP1Q7Z460 1538 aa43.56■■■■■ 4.56
HSDL1-206ENST00000567294 ADAMTS12P58397 1594 aa43.5■■■■■ 4.55
HSDL1-206ENST00000567294 ERICH3Q5RHP9 1530 aa43.38■■■■■ 4.54
HSDL1-206ENST00000567294 GRIN2AQ12879 1464 aa43.35■■■■■ 4.53
HSDL1-206ENST00000567294 ARAP1Q96P48 1450 aa43.32■■■■■ 4.53
HSDL1-206ENST00000567294 FHAD1B1AJZ9 1412 aa43.28■■■■■ 4.52
HSDL1-206ENST00000567294 CEP170Q5SW79 1584 aa43.23■■■■■ 4.51
HSDL1-206ENST00000567294 CYB5RLQ6IPT4 315 aa43.2■■■■■ 4.51
HSDL1-206ENST00000567294 NUP160Q12769 1436 aa43.15■■■■■ 4.5
HSDL1-206ENST00000567294 KIF27Q86VH2 1401 aa43.05■■■■■ 4.48
HSDL1-206ENST00000567294 ERCC6L2Q5T890 1561 aa42.97■■■■■ 4.47
HSDL1-206ENST00000567294 SHROOM2Q13796 1616 aa42.97■■■■■ 4.47
HSDL1-206ENST00000567294 CUL7Q14999 1698 aa42.96■■■■■ 4.47
HSDL1-206ENST00000567294 IGF1RP08069 1367 aa42.91■■■■■ 4.46
HSDL1-206ENST00000567294 RUSC2Q8N2Y8 1516 aa42.88■■■■■ 4.46
HSDL1-206ENST00000567294 CARMIL1Q5VZK9 1371 aa42.66■■■■■ 4.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms