RNA–Protein interactions for RNA: ENST00000567284.6

FANCA-223, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-223ENST00000567284 NISCHQ9Y2I1 1504 aa21.98■■□□□ 1.11
FANCA-223ENST00000567284 CCDC180Q9P1Z9 1646 aa19.4■□□□□ 0.7
FANCA-223ENST00000567284 ABCC9O60706 1549 aa18.7■□□□□ 0.58
FANCA-223ENST00000567284 DCAF8L2P0C7V8 631 aa18.38■□□□□ 0.53
FANCA-223ENST00000567284 ZCCHC6Q5VYS8 1495 aaKnown RBP18.38■□□□□ 0.53
FANCA-223ENST00000567284 DCAF1Q9Y4B6 1507 aa18.13■□□□□ 0.49
FANCA-223ENST00000567284 NACADO15069 1562 aa18.13■□□□□ 0.49
FANCA-223ENST00000567284 RB1CC1Q8TDY2 1594 aa18.09■□□□□ 0.49
FANCA-223ENST00000567284 MYO15BQ96JP2 1530 aa18.03■□□□□ 0.48
FANCA-223ENST00000567284 SCRIBQ14160 1630 aa17.83■□□□□ 0.45
FANCA-223ENST00000567284 UNC13AQ9UPW8 1703 aa17.83■□□□□ 0.44
FANCA-223ENST00000567284 SHROOM4Q9ULL8 1493 aa17.75■□□□□ 0.43
FANCA-223ENST00000567284 PABPN1Q86U42 306 aaKnown RBP eCLIP17.55■□□□□ 0.43e-7■■■■□ 19.8
FANCA-223ENST00000567284 BICRAQ9NZM4 1560 aa17.53■□□□□ 0.4
FANCA-223ENST00000567284 CECR2Q9BXF3 1484 aa17.12■□□□□ 0.33
FANCA-223ENST00000567284 EIF4G1Q04637 1599 aaKnown RBP17.04■□□□□ 0.32
FANCA-223ENST00000567284 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
FANCA-223ENST00000567284 BAZ1AQ9NRL2 1556 aaPredicted RBP17.02■□□□□ 0.31
FANCA-223ENST00000567284 MROH2BQ7Z745 1585 aa16.99■□□□□ 0.31
FANCA-223ENST00000567284 CC2D2AQ9P2K1 1620 aa16.92■□□□□ 0.3
FANCA-223ENST00000567284 WIZO95785 1651 aa16.9■□□□□ 0.3
FANCA-223ENST00000567284 RSF1Q96T23 1441 aaPredicted RBP16.88■□□□□ 0.29
FANCA-223ENST00000567284 SUPT5HO00267 1087 aaKnown RBP16.88■□□□□ 0.29
FANCA-223ENST00000567284 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
FANCA-223ENST00000567284 SMARCA2P51531 1590 aa16.79■□□□□ 0.28
FANCA-223ENST00000567284 ATAD2BQ9ULI0 1458 aa16.79■□□□□ 0.28
FANCA-223ENST00000567284 PEG3Q9GZU2 1588 aa16.76■□□□□ 0.27
FANCA-223ENST00000567284 BAZ1BQ9UIG0 1483 aaKnown RBP16.71■□□□□ 0.27
FANCA-223ENST00000567284 NCAPD3P42695 1498 aa16.67■□□□□ 0.26
FANCA-223ENST00000567284 TOP2AP11388 1531 aaKnown RBP16.65■□□□□ 0.26
FANCA-223ENST00000567284 HMGXB3Q12766 1538 aa16.65■□□□□ 0.26
FANCA-223ENST00000567284 CCDC88BA6NC98 1476 aa16.47■□□□□ 0.23
FANCA-223ENST00000567284 NESP48681 1621 aa16.29■□□□□ 0.2
FANCA-223ENST00000567284 PRDM2Q13029 1718 aa16.28■□□□□ 0.2
FANCA-223ENST00000567284 LAMC3Q9Y6N6 1575 aa16.24■□□□□ 0.19
FANCA-223ENST00000567284 CADPSQ9ULU8 1353 aa16.24■□□□□ 0.19
FANCA-223ENST00000567284 CFTRP13569 1480 aa16.21■□□□□ 0.19
FANCA-223ENST00000567284 KIF21AQ7Z4S6 1674 aa16.17■□□□□ 0.18
FANCA-223ENST00000567284 FANCD2Q9BXW9 1451 aa16.1■□□□□ 0.17
FANCA-223ENST00000567284 PDS5BQ9NTI5 1447 aa16.1■□□□□ 0.17
FANCA-223ENST00000567284 ERCC6Q03468 1493 aa16.08■□□□□ 0.16
FANCA-223ENST00000567284 ABCC8Q09428 1581 aa16.05■□□□□ 0.16
FANCA-223ENST00000567284 CEP164Q9UPV0 1460 aa16.05■□□□□ 0.16
FANCA-223ENST00000567284 MRC2Q9UBG0 1479 aa15.94■□□□□ 0.14
FANCA-223ENST00000567284 THOC2Q8NI27 1593 aaKnown RBP15.93■□□□□ 0.14
FANCA-223ENST00000567284 WRNQ14191 1432 aaPredicted RBP eCLIP15.93■□□□□ 0.14
FANCA-223ENST00000567284 CUX1P39880 1505 aa15.92■□□□□ 0.14
FANCA-223ENST00000567284 URB2Q14146 1524 aaKnown RBP15.92■□□□□ 0.14
FANCA-223ENST00000567284 SYNJ1O43426 1573 aa15.92■□□□□ 0.14
FANCA-223ENST00000567284 DNMBPQ6XZF7 1577 aa15.9■□□□□ 0.14
FANCA-223ENST00000567284 CHIC1Q5VXU3 224 aa15.89■□□□□ 0.13
FANCA-223ENST00000567284 BIVM-ERCC5R4GMW8 1640 aa15.89■□□□□ 0.13
FANCA-223ENST00000567284 TOPBP1Q92547 1522 aa15.89■□□□□ 0.13
FANCA-223ENST00000567284 TOP2BQ02880 1626 aa15.86■□□□□ 0.13
FANCA-223ENST00000567284 TRIM41Q8WV44 630 aa15.86■□□□□ 0.13
FANCA-223ENST00000567284 WDR62O43379 1518 aa15.85■□□□□ 0.13
FANCA-223ENST00000567284 FGD5Q6ZNL6 1462 aa15.81■□□□□ 0.12
FANCA-223ENST00000567284 POLA1P09884 1462 aaPredicted RBP15.76■□□□□ 0.11
FANCA-223ENST00000567284 RAD54L2Q9Y4B4 1467 aa15.74■□□□□ 0.11
FANCA-223ENST00000567284 SOGA1O94964 1423 aa15.72■□□□□ 0.11
FANCA-223ENST00000567284 CUX2O14529 1486 aa15.7■□□□□ 0.1
FANCA-223ENST00000567284 TARBP1Q13395 1621 aaKnown RBP15.69■□□□□ 0.1
FANCA-223ENST00000567284 WDR97A6NE52 1622 aa15.68■□□□□ 0.1
FANCA-223ENST00000567284 IFT140Q96RY7 1462 aa15.66■□□□□ 0.1
FANCA-223ENST00000567284 FAM9AQ8IZU1 332 aaPredicted RBP15.62■□□□□ 0.09
FANCA-223ENST00000567284 ABCA10Q8WWZ4 1543 aa15.62■□□□□ 0.09
FANCA-223ENST00000567284 RUSC2Q8N2Y8 1516 aa15.61■□□□□ 0.09
FANCA-223ENST00000567284 ZNF608Q9ULD9 1512 aaPredicted RBP15.61■□□□□ 0.09
FANCA-223ENST00000567284 TDRD9Q8NDG6 1382 aaKnown RBP15.61■□□□□ 0.09
FANCA-223ENST00000567284 DNAJC5Q9H3Z4 198 aa15.59■□□□□ 0.09
FANCA-223ENST00000567284 PBRM1Q86U86 1689 aa15.59■□□□□ 0.09
FANCA-223ENST00000567284 EIF4G3O43432 1585 aaKnown RBP15.58■□□□□ 0.09
FANCA-223ENST00000567284 AQRO60306 1485 aaKnown RBP eCLIP15.58■□□□□ 0.088e-8■■■□□ 14.8
FANCA-223ENST00000567284 ABCA5Q8WWZ7 1642 aa15.57■□□□□ 0.08
FANCA-223ENST00000567284 KIF27Q86VH2 1401 aa15.56■□□□□ 0.08
FANCA-223ENST00000567284 GAPVD1Q14C86 1478 aa15.54■□□□□ 0.08
FANCA-223ENST00000567284 GRIN2BQ13224 1484 aa15.47■□□□□ 0.07
FANCA-223ENST00000567284 EEA1Q15075 1411 aa15.47■□□□□ 0.07
FANCA-223ENST00000567284 EHMT2Q96KQ7 1210 aa15.47■□□□□ 0.07
FANCA-223ENST00000567284 ERICH3Q5RHP9 1530 aa15.45■□□□□ 0.06
FANCA-223ENST00000567284 CSRNP3Q8WYN3 585 aa15.45■□□□□ 0.06
FANCA-223ENST00000567284 SNAPC4Q5SXM2 1469 aa15.45■□□□□ 0.06
FANCA-223ENST00000567284 IGF1RP08069 1367 aa15.43■□□□□ 0.06
FANCA-223ENST00000567284 CUL7Q14999 1698 aa15.43■□□□□ 0.06
FANCA-223ENST00000567284 ADAMTS12P58397 1594 aa15.41■□□□□ 0.06
FANCA-223ENST00000567284 CHD1O14646 1710 aa15.4■□□□□ 0.06
FANCA-223ENST00000567284 CARMIL1Q5VZK9 1371 aa15.38■□□□□ 0.05
FANCA-223ENST00000567284 FBLN2P98095 1184 aa15.38■□□□□ 0.05
FANCA-223ENST00000567284 MAGI1Q96QZ7 1491 aaPredicted RBP15.37■□□□□ 0.05
FANCA-223ENST00000567284 KIF21BO75037 1637 aa15.35■□□□□ 0.05
FANCA-223ENST00000567284 FHAD1B1AJZ9 1412 aa15.34■□□□□ 0.05
FANCA-223ENST00000567284 CHMP7Q8WUX9 453 aaPredicted RBP15.33■□□□□ 0.04
FANCA-223ENST00000567284 PRXQ9BXM0 1461 aa15.33■□□□□ 0.04
FANCA-223ENST00000567284 RAPGEF2Q9Y4G8 1499 aa15.33■□□□□ 0.04
FANCA-223ENST00000567284 SYNJ2O15056 1496 aa15.32■□□□□ 0.04
FANCA-223ENST00000567284 LOC105371045A0A1W2PR82 267 aa15.31■□□□□ 0.04
FANCA-223ENST00000567284 GOLGA3Q08378 1498 aa15.28■□□□□ 0.04
FANCA-223ENST00000567284 GRIN2AQ12879 1464 aa15.28■□□□□ 0.04
FANCA-223ENST00000567284 UBTFP17480 764 aaKnown RBP15.28■□□□□ 0.04
FANCA-223ENST00000567284 CTTNBP2Q8WZ74 1663 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms