RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 NISCHQ9Y2I1 1504 aa26.48■■□□□ 1.83
BBS4-213ENST00000567279 CCDC180Q9P1Z9 1646 aa23.11■■□□□ 1.29
BBS4-213ENST00000567279 ZCCHC6Q5VYS8 1495 aaKnown RBP22.27■■□□□ 1.16
BBS4-213ENST00000567279 DCAF1Q9Y4B6 1507 aa21.87■■□□□ 1.09
BBS4-213ENST00000567279 DCAF8L2P0C7V8 631 aa21.86■■□□□ 1.09
BBS4-213ENST00000567279 ABCC9O60706 1549 aa21.8■■□□□ 1.08
BBS4-213ENST00000567279 SHROOM4Q9ULL8 1493 aa21.7■■□□□ 1.06
BBS4-213ENST00000567279 MYO15BQ96JP2 1530 aa21.56■■□□□ 1.04
BBS4-213ENST00000567279 NACADO15069 1562 aa21.46■■□□□ 1.03
BBS4-213ENST00000567279 SCRIBQ14160 1630 aa21.3■■□□□ 1
BBS4-213ENST00000567279 RB1CC1Q8TDY2 1594 aa21.3■■□□□ 1
BBS4-213ENST00000567279 UNC13AQ9UPW8 1703 aa20.93■□□□□ 0.94
BBS4-213ENST00000567279 SUPT5HO00267 1087 aaKnown RBP20.87■□□□□ 0.93
BBS4-213ENST00000567279 BICRAQ9NZM4 1560 aa20.65■□□□□ 0.9
BBS4-213ENST00000567279 CECR2Q9BXF3 1484 aa20.58■□□□□ 0.89
BBS4-213ENST00000567279 RSF1Q96T23 1441 aaPredicted RBP20.55■□□□□ 0.88
BBS4-213ENST00000567279 PABPN1Q86U42 306 aaKnown RBP eCLIP20.54■□□□□ 0.88
BBS4-213ENST00000567279 MROH2BQ7Z745 1585 aa20.48■□□□□ 0.87
BBS4-213ENST00000567279 BAZ1AQ9NRL2 1556 aaPredicted RBP20.46■□□□□ 0.87
BBS4-213ENST00000567279 SMARCA4P51532 1647 aa20.39■□□□□ 0.85
BBS4-213ENST00000567279 WIZO95785 1651 aa20.35■□□□□ 0.85
BBS4-213ENST00000567279 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
BBS4-213ENST00000567279 PEG3Q9GZU2 1588 aa20.09■□□□□ 0.81
BBS4-213ENST00000567279 EIF4G1Q04637 1599 aaKnown RBP20.03■□□□□ 0.8
BBS4-213ENST00000567279 SMARCA2P51531 1590 aa20■□□□□ 0.79
BBS4-213ENST00000567279 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
BBS4-213ENST00000567279 CHIC1Q5VXU3 224 aa19.97■□□□□ 0.79
BBS4-213ENST00000567279 BAZ1BQ9UIG0 1483 aaKnown RBP19.91■□□□□ 0.78
BBS4-213ENST00000567279 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.77
BBS4-213ENST00000567279 HMGXB3Q12766 1538 aa19.81■□□□□ 0.76
BBS4-213ENST00000567279 NCAPD3P42695 1498 aa19.77■□□□□ 0.76
BBS4-213ENST00000567279 CC2D2AQ9P2K1 1620 aa19.72■□□□□ 0.75
BBS4-213ENST00000567279 TRIM41Q8WV44 630 aa19.59■□□□□ 0.73
BBS4-213ENST00000567279 ABCC8Q09428 1581 aa19.55■□□□□ 0.72
BBS4-213ENST00000567279 PRDM2Q13029 1718 aa19.39■□□□□ 0.69
BBS4-213ENST00000567279 CFTRP13569 1480 aa19.37■□□□□ 0.69
BBS4-213ENST00000567279 WRNQ14191 1432 aaPredicted RBP eCLIP19.36■□□□□ 0.69
BBS4-213ENST00000567279 SYNJ1O43426 1573 aa19.32■□□□□ 0.68
BBS4-213ENST00000567279 FAM9AQ8IZU1 332 aaPredicted RBP19.28■□□□□ 0.68
BBS4-213ENST00000567279 CADPSQ9ULU8 1353 aa19.28■□□□□ 0.68
BBS4-213ENST00000567279 LOC105371045A0A1W2PR82 267 aa19.22■□□□□ 0.67
BBS4-213ENST00000567279 TOP2BQ02880 1626 aa19.22■□□□□ 0.67
BBS4-213ENST00000567279 BIVM-ERCC5R4GMW8 1640 aa19.22■□□□□ 0.67
BBS4-213ENST00000567279 DNAJC5BQ9UF47 199 aa19.16■□□□□ 0.66
BBS4-213ENST00000567279 NESP48681 1621 aa19.15■□□□□ 0.66
BBS4-213ENST00000567279 CUX1P39880 1505 aa19.15■□□□□ 0.66
BBS4-213ENST00000567279 SOGA1O94964 1423 aa19.15■□□□□ 0.66
BBS4-213ENST00000567279 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
BBS4-213ENST00000567279 FANCD2Q9BXW9 1451 aa19.12■□□□□ 0.65
BBS4-213ENST00000567279 EEA1Q15075 1411 aa19.09■□□□□ 0.65
BBS4-213ENST00000567279 RUSC2Q8N2Y8 1516 aa19.08■□□□□ 0.64
BBS4-213ENST00000567279 EHMT2Q96KQ7 1210 aa19.05■□□□□ 0.64
BBS4-213ENST00000567279 CEP164Q9UPV0 1460 aa19■□□□□ 0.63
BBS4-213ENST00000567279 KIF21AQ7Z4S6 1674 aa18.98■□□□□ 0.63
BBS4-213ENST00000567279 DNMBPQ6XZF7 1577 aa18.97■□□□□ 0.63
BBS4-213ENST00000567279 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
BBS4-213ENST00000567279 PDS5BQ9NTI5 1447 aa18.96■□□□□ 0.63
BBS4-213ENST00000567279 FGD5Q6ZNL6 1462 aa18.94■□□□□ 0.62
BBS4-213ENST00000567279 TOPBP1Q92547 1522 aa18.91■□□□□ 0.62
BBS4-213ENST00000567279 KIF21BO75037 1637 aa18.9■□□□□ 0.62
BBS4-213ENST00000567279 URB2Q14146 1524 aaKnown RBP18.88■□□□□ 0.61
BBS4-213ENST00000567279 GOLGA3Q08378 1498 aa18.87■□□□□ 0.61
BBS4-213ENST00000567279 KIF27Q86VH2 1401 aa18.86■□□□□ 0.61
BBS4-213ENST00000567279 CUX2O14529 1486 aa18.83■□□□□ 0.6
BBS4-213ENST00000567279 POLA1P09884 1462 aaPredicted RBP18.83■□□□□ 0.6
BBS4-213ENST00000567279 TNIKQ9UKE5 1360 aa18.78■□□□□ 0.6
BBS4-213ENST00000567279 RAD54L2Q9Y4B4 1467 aa18.77■□□□□ 0.6
BBS4-213ENST00000567279 UBTFP17480 764 aaKnown RBP18.77■□□□□ 0.6
BBS4-213ENST00000567279 RAPGEF2Q9Y4G8 1499 aa18.76■□□□□ 0.59
BBS4-213ENST00000567279 MRC2Q9UBG0 1479 aa18.76■□□□□ 0.59
BBS4-213ENST00000567279 WDR97A6NE52 1622 aa18.75■□□□□ 0.59
BBS4-213ENST00000567279 ABCA10Q8WWZ4 1543 aa18.74■□□□□ 0.59
BBS4-213ENST00000567279 ERICH3Q5RHP9 1530 aa18.74■□□□□ 0.59
BBS4-213ENST00000567279 CEP162Q5TB80 1403 aa18.73■□□□□ 0.59
BBS4-213ENST00000567279 PRXQ9BXM0 1461 aa18.73■□□□□ 0.59
BBS4-213ENST00000567279 ERCC6Q03468 1493 aa18.69■□□□□ 0.58
BBS4-213ENST00000567279 WDR62O43379 1518 aa18.65■□□□□ 0.58
BBS4-213ENST00000567279 IGF1RP08069 1367 aa18.65■□□□□ 0.58
BBS4-213ENST00000567279 TARBP1Q13395 1621 aaKnown RBP18.64■□□□□ 0.57
BBS4-213ENST00000567279 ABCA5Q8WWZ7 1642 aa18.63■□□□□ 0.57
BBS4-213ENST00000567279 THOC2Q8NI27 1593 aaKnown RBP18.62■□□□□ 0.57
BBS4-213ENST00000567279 CUL7Q14999 1698 aa18.59■□□□□ 0.57
BBS4-213ENST00000567279 CARMIL1Q5VZK9 1371 aa18.58■□□□□ 0.57
BBS4-213ENST00000567279 CLIP1P30622 1438 aa18.57■□□□□ 0.56
BBS4-213ENST00000567279 TDRD9Q8NDG6 1382 aaKnown RBP18.56■□□□□ 0.56
BBS4-213ENST00000567279 GAPVD1Q14C86 1478 aa18.56■□□□□ 0.56
BBS4-213ENST00000567279 PBRM1Q86U86 1689 aa18.53■□□□□ 0.56
BBS4-213ENST00000567279 IFT140Q96RY7 1462 aa18.52■□□□□ 0.55
BBS4-213ENST00000567279 RANGAP1P46060 587 aaPredicted RBP18.49■□□□□ 0.55
BBS4-213ENST00000567279 AQRO60306 1485 aaKnown RBP eCLIP18.45■□□□□ 0.542e-6■■■■■ 31
BBS4-213ENST00000567279 ZNF608Q9ULD9 1512 aaPredicted RBP18.43■□□□□ 0.54
BBS4-213ENST00000567279 CTTNBP2Q8WZ74 1663 aa18.43■□□□□ 0.54
BBS4-213ENST00000567279 PCGF6Q9BYE7 350 aa18.42■□□□□ 0.54
BBS4-213ENST00000567279 EIF4G3O43432 1585 aaKnown RBP18.41■□□□□ 0.54
BBS4-213ENST00000567279 VPS8Q8N3P4 1428 aa18.41■□□□□ 0.54
BBS4-213ENST00000567279 GRIN2BQ13224 1484 aa18.4■□□□□ 0.54
BBS4-213ENST00000567279 ADAMTS12P58397 1594 aa18.4■□□□□ 0.54
BBS4-213ENST00000567279 ARAP1Q96P48 1450 aa18.39■□□□□ 0.53
BBS4-213ENST00000567279 TRIM26Q12899 539 aaPredicted RBP18.37■□□□□ 0.53
BBS4-213ENST00000567279 PPARGC1BQ86YN6 1023 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms