RNA–Protein interactions for RNA: ENST00000567178.1

ITGAM-206, Transcript of integrin subunit alpha M, humanhuman

TSL 5

Gene ITGAM, Length 378 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-206ENST00000567178 NISCHQ9Y2I1 1504 aa10.9□□□□□ -0.66
ITGAM-206ENST00000567178 CCDC180Q9P1Z9 1646 aa9.62□□□□□ -0.87
ITGAM-206ENST00000567178 ABCC9O60706 1549 aa9.21□□□□□ -0.94
ITGAM-206ENST00000567178 ZCCHC6Q5VYS8 1495 aaKnown RBP9.13□□□□□ -0.95
ITGAM-206ENST00000567178 DCAF1Q9Y4B6 1507 aa9.05□□□□□ -0.96
ITGAM-206ENST00000567178 MYO15BQ96JP2 1530 aa9.03□□□□□ -0.96
ITGAM-206ENST00000567178 NACADO15069 1562 aa8.98□□□□□ -0.97
ITGAM-206ENST00000567178 RB1CC1Q8TDY2 1594 aa8.92□□□□□ -0.98
ITGAM-206ENST00000567178 DCAF8L2P0C7V8 631 aa8.85□□□□□ -0.99
ITGAM-206ENST00000567178 UNC13AQ9UPW8 1703 aa8.85□□□□□ -0.99
ITGAM-206ENST00000567178 BICRAQ9NZM4 1560 aa8.77□□□□□ -1.01
ITGAM-206ENST00000567178 SCRIBQ14160 1630 aa8.75□□□□□ -1.01
ITGAM-206ENST00000567178 PABPN1Q86U42 306 aaKnown RBP eCLIP8.62□□□□□ -1.03
ITGAM-206ENST00000567178 SHROOM4Q9ULL8 1493 aa8.61□□□□□ -1.03
ITGAM-206ENST00000567178 CECR2Q9BXF3 1484 aa8.5□□□□□ -1.05
ITGAM-206ENST00000567178 EIF4G1Q04637 1599 aaKnown RBP8.45□□□□□ -1.06
ITGAM-206ENST00000567178 MROH2BQ7Z745 1585 aa8.42□□□□□ -1.06
ITGAM-206ENST00000567178 SMARCA4P51532 1647 aa8.42□□□□□ -1.06
ITGAM-206ENST00000567178 DNAJC5BQ9UF47 199 aa8.4□□□□□ -1.06
ITGAM-206ENST00000567178 BAZ1AQ9NRL2 1556 aaPredicted RBP8.39□□□□□ -1.07
ITGAM-206ENST00000567178 PEG3Q9GZU2 1588 aa8.38□□□□□ -1.07
ITGAM-206ENST00000567178 RSF1Q96T23 1441 aaPredicted RBP8.37□□□□□ -1.07
ITGAM-206ENST00000567178 CC2D2AQ9P2K1 1620 aa8.37□□□□□ -1.07
ITGAM-206ENST00000567178 WIZO95785 1651 aa8.33□□□□□ -1.08
ITGAM-206ENST00000567178 ATAD2BQ9ULI0 1458 aa8.32□□□□□ -1.08
ITGAM-206ENST00000567178 NCAPD3P42695 1498 aa8.32□□□□□ -1.08
ITGAM-206ENST00000567178 SMARCA2P51531 1590 aa8.28□□□□□ -1.08
ITGAM-206ENST00000567178 HMGXB3Q12766 1538 aa8.27□□□□□ -1.09
ITGAM-206ENST00000567178 TOP2AP11388 1531 aaKnown RBP8.23□□□□□ -1.09
ITGAM-206ENST00000567178 BAZ1BQ9UIG0 1483 aaKnown RBP8.21□□□□□ -1.09
ITGAM-206ENST00000567178 SUPT5HO00267 1087 aaKnown RBP8.14□□□□□ -1.11
ITGAM-206ENST00000567178 CCDC88BA6NC98 1476 aa8.13□□□□□ -1.11
ITGAM-206ENST00000567178 NESP48681 1621 aa8.07□□□□□ -1.12
ITGAM-206ENST00000567178 CFTRP13569 1480 aa8.06□□□□□ -1.12
ITGAM-206ENST00000567178 CADPSQ9ULU8 1353 aa8.04□□□□□ -1.12
ITGAM-206ENST00000567178 LAMC3Q9Y6N6 1575 aa8.03□□□□□ -1.12
ITGAM-206ENST00000567178 PRDM2Q13029 1718 aa8.02□□□□□ -1.13
ITGAM-206ENST00000567178 KIF21AQ7Z4S6 1674 aa7.98□□□□□ -1.13
ITGAM-206ENST00000567178 FANCD2Q9BXW9 1451 aa7.94□□□□□ -1.14
ITGAM-206ENST00000567178 THOC2Q8NI27 1593 aaKnown RBP7.93□□□□□ -1.14
ITGAM-206ENST00000567178 PDS5BQ9NTI5 1447 aa7.91□□□□□ -1.14
ITGAM-206ENST00000567178 URB2Q14146 1524 aaKnown RBP7.9□□□□□ -1.14
ITGAM-206ENST00000567178 ABCC8Q09428 1581 aa7.88□□□□□ -1.15
ITGAM-206ENST00000567178 WDR62O43379 1518 aa7.88□□□□□ -1.15
ITGAM-206ENST00000567178 CUX1P39880 1505 aa7.88□□□□□ -1.15
ITGAM-206ENST00000567178 CEP164Q9UPV0 1460 aa7.88□□□□□ -1.15
ITGAM-206ENST00000567178 MRC2Q9UBG0 1479 aa7.87□□□□□ -1.15
ITGAM-206ENST00000567178 SYNJ1O43426 1573 aa7.86□□□□□ -1.15
ITGAM-206ENST00000567178 TOPBP1Q92547 1522 aa7.86□□□□□ -1.15
ITGAM-206ENST00000567178 BIVM-ERCC5R4GMW8 1640 aa7.85□□□□□ -1.15
ITGAM-206ENST00000567178 DNMBPQ6XZF7 1577 aa7.85□□□□□ -1.15
ITGAM-206ENST00000567178 ERCC6Q03468 1493 aa7.84□□□□□ -1.15
ITGAM-206ENST00000567178 TOP2BQ02880 1626 aa7.84□□□□□ -1.15
ITGAM-206ENST00000567178 CUX2O14529 1486 aa7.83□□□□□ -1.16
ITGAM-206ENST00000567178 WRNQ14191 1432 aaPredicted RBP eCLIP7.83□□□□□ -1.16
ITGAM-206ENST00000567178 TARBP1Q13395 1621 aaKnown RBP7.8□□□□□ -1.16
ITGAM-206ENST00000567178 POLA1P09884 1462 aaPredicted RBP7.8□□□□□ -1.16
ITGAM-206ENST00000567178 FGD5Q6ZNL6 1462 aa7.79□□□□□ -1.16
ITGAM-206ENST00000567178 WDR97A6NE52 1622 aa7.78□□□□□ -1.16
ITGAM-206ENST00000567178 CHIC1Q5VXU3 224 aa7.77□□□□□ -1.17
ITGAM-206ENST00000567178 RAD54L2Q9Y4B4 1467 aa7.76□□□□□ -1.17
ITGAM-206ENST00000567178 ABCA10Q8WWZ4 1543 aa7.74□□□□□ -1.17
ITGAM-206ENST00000567178 ZNF608Q9ULD9 1512 aaPredicted RBP7.74□□□□□ -1.17
ITGAM-206ENST00000567178 IFT140Q96RY7 1462 aa7.73□□□□□ -1.17
ITGAM-206ENST00000567178 SOGA1O94964 1423 aa7.72□□□□□ -1.17
ITGAM-206ENST00000567178 ABCA5Q8WWZ7 1642 aa7.72□□□□□ -1.17
ITGAM-206ENST00000567178 RUSC2Q8N2Y8 1516 aa7.71□□□□□ -1.18
ITGAM-206ENST00000567178 EIF4G3O43432 1585 aaKnown RBP7.7□□□□□ -1.18
ITGAM-206ENST00000567178 AQRO60306 1485 aaKnown RBP eCLIP7.68□□□□□ -1.18
ITGAM-206ENST00000567178 TDRD9Q8NDG6 1382 aaKnown RBP7.68□□□□□ -1.18
ITGAM-206ENST00000567178 TRIM41Q8WV44 630 aa7.67□□□□□ -1.18
ITGAM-206ENST00000567178 PBRM1Q86U86 1689 aa7.66□□□□□ -1.18
ITGAM-206ENST00000567178 GAPVD1Q14C86 1478 aa7.64□□□□□ -1.19
ITGAM-206ENST00000567178 IGF1RP08069 1367 aa7.64□□□□□ -1.19
ITGAM-206ENST00000567178 ERICH3Q5RHP9 1530 aa7.62□□□□□ -1.19
ITGAM-206ENST00000567178 KIF27Q86VH2 1401 aa7.62□□□□□ -1.19
ITGAM-206ENST00000567178 ADAMTS12P58397 1594 aa7.62□□□□□ -1.19
ITGAM-206ENST00000567178 GRIN2BQ13224 1484 aa7.62□□□□□ -1.19
ITGAM-206ENST00000567178 PRXQ9BXM0 1461 aa7.61□□□□□ -1.19
ITGAM-206ENST00000567178 SNAPC4Q5SXM2 1469 aa7.6□□□□□ -1.19
ITGAM-206ENST00000567178 MAGI1Q96QZ7 1491 aaPredicted RBP7.6□□□□□ -1.19
ITGAM-206ENST00000567178 EEA1Q15075 1411 aa7.58□□□□□ -1.2
ITGAM-206ENST00000567178 CHD1O14646 1710 aa7.58□□□□□ -1.2
ITGAM-206ENST00000567178 CUL7Q14999 1698 aa7.57□□□□□ -1.2
ITGAM-206ENST00000567178 SYNJ2O15056 1496 aa7.57□□□□□ -1.2
ITGAM-206ENST00000567178 FHAD1B1AJZ9 1412 aa7.56□□□□□ -1.2
ITGAM-206ENST00000567178 FAM9AQ8IZU1 332 aaPredicted RBP7.55□□□□□ -1.2
ITGAM-206ENST00000567178 CSRNP3Q8WYN3 585 aa7.55□□□□□ -1.2
ITGAM-206ENST00000567178 KIF21BO75037 1637 aa7.55□□□□□ -1.2
ITGAM-206ENST00000567178 GRIN2AQ12879 1464 aa7.55□□□□□ -1.2
ITGAM-206ENST00000567178 CEP170Q5SW79 1584 aa7.54□□□□□ -1.2
ITGAM-206ENST00000567178 NUP160Q12769 1436 aa7.54□□□□□ -1.2
ITGAM-206ENST00000567178 EHMT2Q96KQ7 1210 aa7.54□□□□□ -1.2
ITGAM-206ENST00000567178 CARMIL1Q5VZK9 1371 aa7.54□□□□□ -1.2
ITGAM-206ENST00000567178 RAPGEF2Q9Y4G8 1499 aa7.54□□□□□ -1.2
ITGAM-206ENST00000567178 CLASP1Q7Z460 1538 aa7.52□□□□□ -1.2
ITGAM-206ENST00000567178 SHROOM2Q13796 1616 aa7.49□□□□□ -1.21
ITGAM-206ENST00000567178 CTTNBP2Q8WZ74 1663 aa7.47□□□□□ -1.21
ITGAM-206ENST00000567178 KIAA0586Q9BVV6 1533 aa7.47□□□□□ -1.21
ITGAM-206ENST00000567178 CHMP7Q8WUX9 453 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms