RNA–Protein interactions for RNA: ENST00000567040.5

PPP4C-210, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

TSL 2

Gene PPP4C, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-210ENST00000567040 NISCHQ9Y2I1 1504 aa43.58■■■■■ 4.57
PPP4C-210ENST00000567040 ABCC9O60706 1549 aa39.09■■■■□ 3.85
PPP4C-210ENST00000567040 CCDC180Q9P1Z9 1646 aa39.08■■■■□ 3.85
PPP4C-210ENST00000567040 RB1CC1Q8TDY2 1594 aa37.15■■■■□ 3.54
PPP4C-210ENST00000567040 DCAF8L2P0C7V8 631 aa36.98■■■■□ 3.51
PPP4C-210ENST00000567040 NACADO15069 1562 aa36.87■■■■□ 3.49
PPP4C-210ENST00000567040 UNC13AQ9UPW8 1703 aa36.48■■■■□ 3.43
PPP4C-210ENST00000567040 DNAJC5BQ9UF47 199 aa36.46■■■■□ 3.43
PPP4C-210ENST00000567040 PABPN1Q86U42 306 aaKnown RBP eCLIP36.42■■■■□ 3.42
PPP4C-210ENST00000567040 MYO15BQ96JP2 1530 aa36.24■■■■□ 3.39
PPP4C-210ENST00000567040 ZCCHC6Q5VYS8 1495 aaKnown RBP36.14■■■■□ 3.38
PPP4C-210ENST00000567040 BICRAQ9NZM4 1560 aa36.06■■■■□ 3.36
PPP4C-210ENST00000567040 DCAF1Q9Y4B6 1507 aa35.88■■■■□ 3.33
PPP4C-210ENST00000567040 SCRIBQ14160 1630 aa35.79■■■■□ 3.32
PPP4C-210ENST00000567040 SHROOM4Q9ULL8 1493 aa35.4■■■■□ 3.26
PPP4C-210ENST00000567040 CC2D2AQ9P2K1 1620 aa35.28■■■■□ 3.24
PPP4C-210ENST00000567040 EIF4G1Q04637 1599 aaKnown RBP35.18■■■■□ 3.22
PPP4C-210ENST00000567040 CECR2Q9BXF3 1484 aa35.11■■■■□ 3.21
PPP4C-210ENST00000567040 SMARCA4P51532 1647 aa34.04■■■■□ 3.04
PPP4C-210ENST00000567040 NCAPD3P42695 1498 aa33.97■■■■□ 3.03
PPP4C-210ENST00000567040 ATAD2BQ9ULI0 1458 aa33.96■■■■□ 3.03
PPP4C-210ENST00000567040 SMARCA2P51531 1590 aa33.89■■■■□ 3.02
PPP4C-210ENST00000567040 BAZ1AQ9NRL2 1556 aaPredicted RBP33.84■■■■□ 3.01
PPP4C-210ENST00000567040 HMGXB3Q12766 1538 aa33.79■■■■□ 3
PPP4C-210ENST00000567040 ERCC6Q03468 1493 aa33.73■■■□□ 2.99
PPP4C-210ENST00000567040 BAZ1BQ9UIG0 1483 aaKnown RBP33.72■■■□□ 2.99
PPP4C-210ENST00000567040 MROH2BQ7Z745 1585 aa33.65■■■□□ 2.98
PPP4C-210ENST00000567040 NESP48681 1621 aa33.61■■■□□ 2.97
PPP4C-210ENST00000567040 PEG3Q9GZU2 1588 aa33.56■■■□□ 2.96
PPP4C-210ENST00000567040 CUX2O14529 1486 aa33.47■■■□□ 2.95
PPP4C-210ENST00000567040 WIZO95785 1651 aa33.35■■■□□ 2.93
PPP4C-210ENST00000567040 DNAJC5Q9H3Z4 198 aa33.3■■■□□ 2.92
PPP4C-210ENST00000567040 LAMC3Q9Y6N6 1575 aa33.27■■■□□ 2.92
PPP4C-210ENST00000567040 KIF21AQ7Z4S6 1674 aa33.24■■■□□ 2.91
PPP4C-210ENST00000567040 THOC2Q8NI27 1593 aaKnown RBP33.19■■■□□ 2.9
PPP4C-210ENST00000567040 PDS5BQ9NTI5 1447 aa33.06■■■□□ 2.88
PPP4C-210ENST00000567040 CADPSQ9ULU8 1353 aa33■■■□□ 2.87
PPP4C-210ENST00000567040 RSF1Q96T23 1441 aaPredicted RBP32.94■■■□□ 2.86
PPP4C-210ENST00000567040 TOP2AP11388 1531 aaKnown RBP32.82■■■□□ 2.85
PPP4C-210ENST00000567040 MRC2Q9UBG0 1479 aa32.82■■■□□ 2.84
PPP4C-210ENST00000567040 CEP164Q9UPV0 1460 aa32.74■■■□□ 2.83
PPP4C-210ENST00000567040 WDR62O43379 1518 aa32.71■■■□□ 2.83
PPP4C-210ENST00000567040 FANCD2Q9BXW9 1451 aa32.7■■■□□ 2.83
PPP4C-210ENST00000567040 CFTRP13569 1480 aa32.63■■■□□ 2.81
PPP4C-210ENST00000567040 PRDM2Q13029 1718 aa32.51■■■□□ 2.8
PPP4C-210ENST00000567040 CCDC88BA6NC98 1476 aa32.45■■■□□ 2.79
PPP4C-210ENST00000567040 URB2Q14146 1524 aaKnown RBP32.43■■■□□ 2.78
PPP4C-210ENST00000567040 TRIM41Q8WV44 630 aa32.14■■■□□ 2.74
PPP4C-210ENST00000567040 TOPBP1Q92547 1522 aa32.1■■■□□ 2.73
PPP4C-210ENST00000567040 ZNF608Q9ULD9 1512 aaPredicted RBP32.04■■■□□ 2.72
PPP4C-210ENST00000567040 IFT140Q96RY7 1462 aa32.02■■■□□ 2.72
PPP4C-210ENST00000567040 DNMBPQ6XZF7 1577 aa32■■■□□ 2.71
PPP4C-210ENST00000567040 OSCARQ8IYS5 282 aa32■■■□□ 2.71
PPP4C-210ENST00000567040 ABCC8Q09428 1581 aa31.94■■■□□ 2.7
PPP4C-210ENST00000567040 EIF4G3O43432 1585 aaKnown RBP31.9■■■□□ 2.7
PPP4C-210ENST00000567040 TARBP1Q13395 1621 aaKnown RBP31.8■■■□□ 2.68
PPP4C-210ENST00000567040 SUPT5HO00267 1087 aaKnown RBP31.79■■■□□ 2.68
PPP4C-210ENST00000567040 AQRO60306 1485 aaKnown RBP eCLIP31.77■■■□□ 2.686e-7■■■■□ 25.4
PPP4C-210ENST00000567040 POLA1P09884 1462 aaPredicted RBP31.77■■■□□ 2.68
PPP4C-210ENST00000567040 CHD1O14646 1710 aa31.73■■■□□ 2.67
PPP4C-210ENST00000567040 RAD54L2Q9Y4B4 1467 aa31.72■■■□□ 2.67
PPP4C-210ENST00000567040 RIMBP3CA6NJZ7 1639 aa31.68■■■□□ 2.66
PPP4C-210ENST00000567040 RIMBP3BA6NNM3 1639 aa31.68■■■□□ 2.66
PPP4C-210ENST00000567040 RIMBP3Q9UFD9 1639 aa31.68■■■□□ 2.66
PPP4C-210ENST00000567040 FBLN2P98095 1184 aa31.64■■■□□ 2.66
PPP4C-210ENST00000567040 SOGA1O94964 1423 aa31.63■■■□□ 2.65
PPP4C-210ENST00000567040 FGD5Q6ZNL6 1462 aa31.63■■■□□ 2.65
PPP4C-210ENST00000567040 CUX1P39880 1505 aa31.61■■■□□ 2.65
PPP4C-210ENST00000567040 TDRD9Q8NDG6 1382 aaKnown RBP31.59■■■□□ 2.65
PPP4C-210ENST00000567040 ARHGEF11O15085 1522 aa31.54■■■□□ 2.64
PPP4C-210ENST00000567040 SNAPC4Q5SXM2 1469 aa31.46■■■□□ 2.63
PPP4C-210ENST00000567040 WDR97A6NE52 1622 aa31.42■■■□□ 2.62
PPP4C-210ENST00000567040 PBRM1Q86U86 1689 aa31.36■■■□□ 2.61
PPP4C-210ENST00000567040 CYB5RLQ6IPT4 315 aa31.34■■■□□ 2.61
PPP4C-210ENST00000567040 CHMP7Q8WUX9 453 aaPredicted RBP31.32■■■□□ 2.6
PPP4C-210ENST00000567040 GRIN2BQ13224 1484 aa31.32■■■□□ 2.6
PPP4C-210ENST00000567040 MAGI1Q96QZ7 1491 aaPredicted RBP31.28■■■□□ 2.6
PPP4C-210ENST00000567040 GAPVD1Q14C86 1478 aa31.26■■■□□ 2.59
PPP4C-210ENST00000567040 ARAP1Q96P48 1450 aa31.24■■■□□ 2.59
PPP4C-210ENST00000567040 SYNJ1O43426 1573 aa31.23■■■□□ 2.59
PPP4C-210ENST00000567040 SYNJ2O15056 1496 aa31.2■■■□□ 2.58
PPP4C-210ENST00000567040 ABCA5Q8WWZ7 1642 aa31.2■■■□□ 2.58
PPP4C-210ENST00000567040 CLASP1Q7Z460 1538 aa31.19■■■□□ 2.58
PPP4C-210ENST00000567040 ABCA10Q8WWZ4 1543 aa31.19■■■□□ 2.58
PPP4C-210ENST00000567040 BIVM-ERCC5R4GMW8 1640 aa31.14■■■□□ 2.58
PPP4C-210ENST00000567040 TOP2BQ02880 1626 aa31.12■■■□□ 2.57
PPP4C-210ENST00000567040 WRNQ14191 1432 aaPredicted RBP eCLIP31.11■■■□□ 2.57
PPP4C-210ENST00000567040 TRHP20396 242 aaPredicted RBP31.03■■■□□ 2.56
PPP4C-210ENST00000567040 ADAMTS12P58397 1594 aa30.98■■■□□ 2.55
PPP4C-210ENST00000567040 GRIN2AQ12879 1464 aa30.93■■■□□ 2.54
PPP4C-210ENST00000567040 CEP170Q5SW79 1584 aa30.87■■■□□ 2.53
PPP4C-210ENST00000567040 ERCC6L2Q5T890 1561 aa30.83■■■□□ 2.53
PPP4C-210ENST00000567040 FHAD1B1AJZ9 1412 aa30.82■■■□□ 2.52
PPP4C-210ENST00000567040 ERICH3Q5RHP9 1530 aa30.8■■■□□ 2.52
PPP4C-210ENST00000567040 NUP160Q12769 1436 aa30.76■■■□□ 2.51
PPP4C-210ENST00000567040 SHROOM2Q13796 1616 aa30.66■■■□□ 2.5
PPP4C-210ENST00000567040 PRG4Q92954 1404 aaPredicted RBP30.55■■■□□ 2.48
PPP4C-210ENST00000567040 RUSC2Q8N2Y8 1516 aa30.53■■■□□ 2.48
PPP4C-210ENST00000567040 KIF27Q86VH2 1401 aa30.49■■■□□ 2.47
PPP4C-210ENST00000567040 JPH4Q96JJ6 628 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms