RNA–Protein interactions for RNA: ENST00000567029.5

GRAMD2A-208, Transcript of GRAM domain containing 2A, humanhuman

TSL 4

Gene GRAMD2A, Length 594 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2A-208ENST00000567029 NISCHQ9Y2I1 1504 aa27.52■■■□□ 2
GRAMD2A-208ENST00000567029 ABCC9O60706 1549 aa25.32■■□□□ 1.64
GRAMD2A-208ENST00000567029 CCDC180Q9P1Z9 1646 aa25.06■■□□□ 1.6
GRAMD2A-208ENST00000567029 DNAJC5BQ9UF47 199 aa24■■□□□ 1.43
GRAMD2A-208ENST00000567029 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
GRAMD2A-208ENST00000567029 NACADO15069 1562 aa23.69■■□□□ 1.38
GRAMD2A-208ENST00000567029 UNC13AQ9UPW8 1703 aa23.51■■□□□ 1.35
GRAMD2A-208ENST00000567029 PABPN1Q86U42 306 aaKnown RBP eCLIP23.36■■□□□ 1.33
GRAMD2A-208ENST00000567029 BICRAQ9NZM4 1560 aa23.3■■□□□ 1.32
GRAMD2A-208ENST00000567029 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
GRAMD2A-208ENST00000567029 DCAF8L2P0C7V8 631 aa23.19■■□□□ 1.3
GRAMD2A-208ENST00000567029 SHROOM4Q9ULL8 1493 aa23.02■■□□□ 1.28
GRAMD2A-208ENST00000567029 CC2D2AQ9P2K1 1620 aa22.92■■□□□ 1.26
GRAMD2A-208ENST00000567029 CECR2Q9BXF3 1484 aa22.87■■□□□ 1.25
GRAMD2A-208ENST00000567029 ZCCHC6Q5VYS8 1495 aaKnown RBP22.78■■□□□ 1.24
GRAMD2A-208ENST00000567029 EIF4G1Q04637 1599 aaKnown RBP22.77■■□□□ 1.24
GRAMD2A-208ENST00000567029 DCAF1Q9Y4B6 1507 aa22.77■■□□□ 1.24
GRAMD2A-208ENST00000567029 SCRIBQ14160 1630 aa22.73■■□□□ 1.23
GRAMD2A-208ENST00000567029 DNAJC5Q9H3Z4 198 aa22.4■■□□□ 1.18
GRAMD2A-208ENST00000567029 CUX2O14529 1486 aa22.09■■□□□ 1.13
GRAMD2A-208ENST00000567029 ERCC6Q03468 1493 aa21.93■■□□□ 1.1
GRAMD2A-208ENST00000567029 NCAPD3P42695 1498 aa21.81■■□□□ 1.08
GRAMD2A-208ENST00000567029 HMGXB3Q12766 1538 aa21.72■■□□□ 1.07
GRAMD2A-208ENST00000567029 ATAD2BQ9ULI0 1458 aa21.69■■□□□ 1.06
GRAMD2A-208ENST00000567029 SMARCA2P51531 1590 aa21.67■■□□□ 1.06
GRAMD2A-208ENST00000567029 SMARCA4P51532 1647 aa21.65■■□□□ 1.06
GRAMD2A-208ENST00000567029 THOC2Q8NI27 1593 aaKnown RBP21.64■■□□□ 1.05
GRAMD2A-208ENST00000567029 NESP48681 1621 aa21.62■■□□□ 1.05
GRAMD2A-208ENST00000567029 BAZ1BQ9UIG0 1483 aaKnown RBP21.5■■□□□ 1.03
GRAMD2A-208ENST00000567029 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
GRAMD2A-208ENST00000567029 KIF21AQ7Z4S6 1674 aa21.45■■□□□ 1.02
GRAMD2A-208ENST00000567029 BAZ1AQ9NRL2 1556 aaPredicted RBP21.44■■□□□ 1.02
GRAMD2A-208ENST00000567029 PEG3Q9GZU2 1588 aa21.44■■□□□ 1.02
GRAMD2A-208ENST00000567029 PDS5BQ9NTI5 1447 aa21.29■■□□□ 1
GRAMD2A-208ENST00000567029 TRIM41Q8WV44 630 aa21.23■□□□□ 0.99
GRAMD2A-208ENST00000567029 WDR62O43379 1518 aa21.19■□□□□ 0.98
GRAMD2A-208ENST00000567029 MROH2BQ7Z745 1585 aa21.19■□□□□ 0.98
GRAMD2A-208ENST00000567029 MRC2Q9UBG0 1479 aa21.19■□□□□ 0.98
GRAMD2A-208ENST00000567029 CADPSQ9ULU8 1353 aa21.09■□□□□ 0.97
GRAMD2A-208ENST00000567029 CEP164Q9UPV0 1460 aa21.02■□□□□ 0.96
GRAMD2A-208ENST00000567029 WIZO95785 1651 aa20.96■□□□□ 0.95
GRAMD2A-208ENST00000567029 FANCD2Q9BXW9 1451 aa20.92■□□□□ 0.94
GRAMD2A-208ENST00000567029 CFTRP13569 1480 aa20.81■□□□□ 0.92
GRAMD2A-208ENST00000567029 RIMBP3CA6NJZ7 1639 aa20.8■□□□□ 0.92
GRAMD2A-208ENST00000567029 RIMBP3BA6NNM3 1639 aa20.8■□□□□ 0.92
GRAMD2A-208ENST00000567029 RIMBP3Q9UFD9 1639 aa20.8■□□□□ 0.92
GRAMD2A-208ENST00000567029 OSCARQ8IYS5 282 aa20.8■□□□□ 0.92
GRAMD2A-208ENST00000567029 URB2Q14146 1524 aaKnown RBP20.78■□□□□ 0.92
GRAMD2A-208ENST00000567029 PRDM2Q13029 1718 aa20.75■□□□□ 0.91
GRAMD2A-208ENST00000567029 TOP2AP11388 1531 aaKnown RBP20.69■□□□□ 0.9
GRAMD2A-208ENST00000567029 ARHGEF11O15085 1522 aa20.66■□□□□ 0.9
GRAMD2A-208ENST00000567029 IFT140Q96RY7 1462 aa20.59■□□□□ 0.89
GRAMD2A-208ENST00000567029 ZNF608Q9ULD9 1512 aaPredicted RBP20.58■□□□□ 0.88
GRAMD2A-208ENST00000567029 EIF4G3O43432 1585 aaKnown RBP20.57■□□□□ 0.88
GRAMD2A-208ENST00000567029 RSF1Q96T23 1441 aaPredicted RBP20.54■□□□□ 0.88
GRAMD2A-208ENST00000567029 CHD1O14646 1710 aa20.5■□□□□ 0.87
GRAMD2A-208ENST00000567029 TOPBP1Q92547 1522 aa20.48■□□□□ 0.87
GRAMD2A-208ENST00000567029 ARAP1Q96P48 1450 aa20.42■□□□□ 0.86
GRAMD2A-208ENST00000567029 DNMBPQ6XZF7 1577 aa20.42■□□□□ 0.86
GRAMD2A-208ENST00000567029 ABCC8Q09428 1581 aa20.39■□□□□ 0.85
GRAMD2A-208ENST00000567029 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
GRAMD2A-208ENST00000567029 CCDC88BA6NC98 1476 aa20.35■□□□□ 0.85
GRAMD2A-208ENST00000567029 CYB5RLQ6IPT4 315 aa20.33■□□□□ 0.85
GRAMD2A-208ENST00000567029 AQRO60306 1485 aaKnown RBP eCLIP20.27■□□□□ 0.84
GRAMD2A-208ENST00000567029 TRHP20396 242 aaPredicted RBP20.27■□□□□ 0.84
GRAMD2A-208ENST00000567029 POLA1P09884 1462 aaPredicted RBP20.24■□□□□ 0.83
GRAMD2A-208ENST00000567029 CLASP1Q7Z460 1538 aa20.22■□□□□ 0.83
GRAMD2A-208ENST00000567029 WDR97A6NE52 1622 aa20.21■□□□□ 0.83
GRAMD2A-208ENST00000567029 SYNJ1O43426 1573 aa20.17■□□□□ 0.82
GRAMD2A-208ENST00000567029 SNAPC4Q5SXM2 1469 aa20.16■□□□□ 0.82
GRAMD2A-208ENST00000567029 FBLN2P98095 1184 aa20.15■□□□□ 0.82
GRAMD2A-208ENST00000567029 RAD54L2Q9Y4B4 1467 aa20.11■□□□□ 0.81
GRAMD2A-208ENST00000567029 MAGI1Q96QZ7 1491 aaPredicted RBP20.09■□□□□ 0.81
GRAMD2A-208ENST00000567029 FGD5Q6ZNL6 1462 aa20.05■□□□□ 0.8
GRAMD2A-208ENST00000567029 SOGA1O94964 1423 aa20.05■□□□□ 0.8
GRAMD2A-208ENST00000567029 TDRD9Q8NDG6 1382 aaKnown RBP20.05■□□□□ 0.8
GRAMD2A-208ENST00000567029 PBRM1Q86U86 1689 aa20.03■□□□□ 0.8
GRAMD2A-208ENST00000567029 AEBP2Q6ZN18 517 aaPredicted RBP20.03■□□□□ 0.8
GRAMD2A-208ENST00000567029 SYNJ2O15056 1496 aa20.01■□□□□ 0.79
GRAMD2A-208ENST00000567029 GRIN2BQ13224 1484 aa20■□□□□ 0.79
GRAMD2A-208ENST00000567029 CUX1P39880 1505 aa19.97■□□□□ 0.79
GRAMD2A-208ENST00000567029 GAPVD1Q14C86 1478 aa19.96■□□□□ 0.79
GRAMD2A-208ENST00000567029 CHMP7Q8WUX9 453 aaPredicted RBP19.95■□□□□ 0.78
GRAMD2A-208ENST00000567029 ABCA5Q8WWZ7 1642 aa19.9■□□□□ 0.78
GRAMD2A-208ENST00000567029 ERCC6L2Q5T890 1561 aa19.82■□□□□ 0.76
GRAMD2A-208ENST00000567029 ABCA10Q8WWZ4 1543 aa19.8■□□□□ 0.76
GRAMD2A-208ENST00000567029 ADAMTS12P58397 1594 aa19.79■□□□□ 0.76
GRAMD2A-208ENST00000567029 GRIN2AQ12879 1464 aa19.78■□□□□ 0.76
GRAMD2A-208ENST00000567029 CEP170Q5SW79 1584 aa19.77■□□□□ 0.76
GRAMD2A-208ENST00000567029 SHROOM2Q13796 1616 aa19.76■□□□□ 0.75
GRAMD2A-208ENST00000567029 KIF13AQ9H1H9 1805 aa19.75■□□□□ 0.75
GRAMD2A-208ENST00000567029 NUP160Q12769 1436 aa19.71■□□□□ 0.75
GRAMD2A-208ENST00000567029 BIVM-ERCC5R4GMW8 1640 aa19.61■□□□□ 0.73
GRAMD2A-208ENST00000567029 FHAD1B1AJZ9 1412 aa19.59■□□□□ 0.73
GRAMD2A-208ENST00000567029 WRNQ14191 1432 aaPredicted RBP eCLIP19.58■□□□□ 0.72
GRAMD2A-208ENST00000567029 ERICH3Q5RHP9 1530 aa19.57■□□□□ 0.72
GRAMD2A-208ENST00000567029 TOP2BQ02880 1626 aa19.56■□□□□ 0.72
GRAMD2A-208ENST00000567029 RUSC2Q8N2Y8 1516 aa19.54■□□□□ 0.72
GRAMD2A-208ENST00000567029 DIP2BQ9P265 1576 aa19.53■□□□□ 0.72
GRAMD2A-208ENST00000567029 MAPKBP1O60336 1514 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms