RNA–Protein interactions for RNA: ENST00000567011.1

CPNE2-209, Transcript of copine 2, humanhuman

TSL 2

Gene CPNE2, Length 901 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-209ENST00000567011 NISCHQ9Y2I1 1504 aa31.9■■■□□ 2.7
CPNE2-209ENST00000567011 ABCC9O60706 1549 aa28.92■■■□□ 2.22
CPNE2-209ENST00000567011 CCDC180Q9P1Z9 1646 aa28.56■■■□□ 2.16
CPNE2-209ENST00000567011 DNAJC5BQ9UF47 199 aa27.35■■□□□ 1.97
CPNE2-209ENST00000567011 RB1CC1Q8TDY2 1594 aa27.32■■□□□ 1.96
CPNE2-209ENST00000567011 NACADO15069 1562 aa27.09■■□□□ 1.93
CPNE2-209ENST00000567011 DCAF8L2P0C7V8 631 aa27.08■■□□□ 1.93
CPNE2-209ENST00000567011 PABPN1Q86U42 306 aaKnown RBP eCLIP26.96■■□□□ 1.91
CPNE2-209ENST00000567011 UNC13AQ9UPW8 1703 aa26.68■■□□□ 1.86
CPNE2-209ENST00000567011 MYO15BQ96JP2 1530 aa26.65■■□□□ 1.86
CPNE2-209ENST00000567011 BICRAQ9NZM4 1560 aa26.62■■□□□ 1.85
CPNE2-209ENST00000567011 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
CPNE2-209ENST00000567011 DCAF1Q9Y4B6 1507 aa26.26■■□□□ 1.79
CPNE2-209ENST00000567011 SCRIBQ14160 1630 aa26.17■■□□□ 1.78
CPNE2-209ENST00000567011 SHROOM4Q9ULL8 1493 aa26.11■■□□□ 1.77
CPNE2-209ENST00000567011 CC2D2AQ9P2K1 1620 aa26.04■■□□□ 1.76
CPNE2-209ENST00000567011 CECR2Q9BXF3 1484 aa26.03■■□□□ 1.76
CPNE2-209ENST00000567011 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.75
CPNE2-209ENST00000567011 DNAJC5Q9H3Z4 198 aa25.11■■□□□ 1.61
CPNE2-209ENST00000567011 NCAPD3P42695 1498 aa25.08■■□□□ 1.6
CPNE2-209ENST00000567011 ATAD2BQ9ULI0 1458 aa25.01■■□□□ 1.59
CPNE2-209ENST00000567011 ERCC6Q03468 1493 aa24.92■■□□□ 1.58
CPNE2-209ENST00000567011 SMARCA4P51532 1647 aa24.9■■□□□ 1.58
CPNE2-209ENST00000567011 CUX2O14529 1486 aa24.88■■□□□ 1.57
CPNE2-209ENST00000567011 SMARCA2P51531 1590 aa24.84■■□□□ 1.57
CPNE2-209ENST00000567011 HMGXB3Q12766 1538 aa24.83■■□□□ 1.57
CPNE2-209ENST00000567011 NESP48681 1621 aa24.83■■□□□ 1.56
CPNE2-209ENST00000567011 BAZ1AQ9NRL2 1556 aaPredicted RBP24.73■■□□□ 1.55
CPNE2-209ENST00000567011 BAZ1BQ9UIG0 1483 aaKnown RBP24.73■■□□□ 1.55
CPNE2-209ENST00000567011 MROH2BQ7Z745 1585 aa24.64■■□□□ 1.54
CPNE2-209ENST00000567011 PEG3Q9GZU2 1588 aa24.63■■□□□ 1.53
CPNE2-209ENST00000567011 THOC2Q8NI27 1593 aaKnown RBP24.51■■□□□ 1.51
CPNE2-209ENST00000567011 LAMC3Q9Y6N6 1575 aa24.47■■□□□ 1.51
CPNE2-209ENST00000567011 KIF21AQ7Z4S6 1674 aa24.37■■□□□ 1.49
CPNE2-209ENST00000567011 PDS5BQ9NTI5 1447 aa24.36■■□□□ 1.49
CPNE2-209ENST00000567011 CADPSQ9ULU8 1353 aa24.32■■□□□ 1.48
CPNE2-209ENST00000567011 WIZO95785 1651 aa24.3■■□□□ 1.48
CPNE2-209ENST00000567011 MRC2Q9UBG0 1479 aa24.2■■□□□ 1.47
CPNE2-209ENST00000567011 WDR62O43379 1518 aa24.14■■□□□ 1.45
CPNE2-209ENST00000567011 RSF1Q96T23 1441 aaPredicted RBP24.07■■□□□ 1.44
CPNE2-209ENST00000567011 CEP164Q9UPV0 1460 aa24.07■■□□□ 1.44
CPNE2-209ENST00000567011 FANCD2Q9BXW9 1451 aa24.06■■□□□ 1.44
CPNE2-209ENST00000567011 TRIM41Q8WV44 630 aa24.01■■□□□ 1.43
CPNE2-209ENST00000567011 CFTRP13569 1480 aa24■■□□□ 1.43
CPNE2-209ENST00000567011 TOP2AP11388 1531 aaKnown RBP23.95■■□□□ 1.43
CPNE2-209ENST00000567011 URB2Q14146 1524 aaKnown RBP23.89■■□□□ 1.42
CPNE2-209ENST00000567011 OSCARQ8IYS5 282 aa23.75■■□□□ 1.39
CPNE2-209ENST00000567011 CCDC88BA6NC98 1476 aa23.74■■□□□ 1.39
CPNE2-209ENST00000567011 ZNF608Q9ULD9 1512 aaPredicted RBP23.66■■□□□ 1.38
CPNE2-209ENST00000567011 TOPBP1Q92547 1522 aa23.59■■□□□ 1.37
CPNE2-209ENST00000567011 IFT140Q96RY7 1462 aa23.58■■□□□ 1.37
CPNE2-209ENST00000567011 PRDM2Q13029 1718 aa23.58■■□□□ 1.37
CPNE2-209ENST00000567011 RIMBP3CA6NJZ7 1639 aa23.46■■□□□ 1.35
CPNE2-209ENST00000567011 RIMBP3BA6NNM3 1639 aa23.46■■□□□ 1.35
CPNE2-209ENST00000567011 RIMBP3Q9UFD9 1639 aa23.46■■□□□ 1.35
CPNE2-209ENST00000567011 EIF4G3O43432 1585 aaKnown RBP23.44■■□□□ 1.34
CPNE2-209ENST00000567011 DNMBPQ6XZF7 1577 aa23.44■■□□□ 1.34
CPNE2-209ENST00000567011 AQRO60306 1485 aaKnown RBP eCLIP23.42■■□□□ 1.34
CPNE2-209ENST00000567011 ABCC8Q09428 1581 aa23.4■■□□□ 1.34
CPNE2-209ENST00000567011 ARHGEF11O15085 1522 aa23.4■■□□□ 1.34
CPNE2-209ENST00000567011 TARBP1Q13395 1621 aaKnown RBP23.35■■□□□ 1.33
CPNE2-209ENST00000567011 POLA1P09884 1462 aaPredicted RBP23.34■■□□□ 1.33
CPNE2-209ENST00000567011 RAD54L2Q9Y4B4 1467 aa23.31■■□□□ 1.32
CPNE2-209ENST00000567011 FBLN2P98095 1184 aa23.28■■□□□ 1.32
CPNE2-209ENST00000567011 CYB5RLQ6IPT4 315 aa23.28■■□□□ 1.32
CPNE2-209ENST00000567011 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.31
CPNE2-209ENST00000567011 CHD1O14646 1710 aa23.25■■□□□ 1.31
CPNE2-209ENST00000567011 SOGA1O94964 1423 aa23.23■■□□□ 1.31
CPNE2-209ENST00000567011 ARAP1Q96P48 1450 aa23.19■■□□□ 1.3
CPNE2-209ENST00000567011 FGD5Q6ZNL6 1462 aa23.17■■□□□ 1.3
CPNE2-209ENST00000567011 SNAPC4Q5SXM2 1469 aa23.15■■□□□ 1.3
CPNE2-209ENST00000567011 CUX1P39880 1505 aa23.14■■□□□ 1.3
CPNE2-209ENST00000567011 TRHP20396 242 aaPredicted RBP23.05■■□□□ 1.28
CPNE2-209ENST00000567011 CHMP7Q8WUX9 453 aaPredicted RBP23.04■■□□□ 1.28
CPNE2-209ENST00000567011 CLASP1Q7Z460 1538 aa23.03■■□□□ 1.28
CPNE2-209ENST00000567011 GRIN2BQ13224 1484 aa23.01■■□□□ 1.27
CPNE2-209ENST00000567011 MAGI1Q96QZ7 1491 aaPredicted RBP23■■□□□ 1.27
CPNE2-209ENST00000567011 WDR97A6NE52 1622 aa22.99■■□□□ 1.27
CPNE2-209ENST00000567011 SYNJ2O15056 1496 aa22.96■■□□□ 1.27
CPNE2-209ENST00000567011 SYNJ1O43426 1573 aa22.94■■□□□ 1.26
CPNE2-209ENST00000567011 SUPT5HO00267 1087 aaKnown RBP22.94■■□□□ 1.26
CPNE2-209ENST00000567011 GAPVD1Q14C86 1478 aa22.92■■□□□ 1.26
CPNE2-209ENST00000567011 ABCA10Q8WWZ4 1543 aa22.87■■□□□ 1.25
CPNE2-209ENST00000567011 PBRM1Q86U86 1689 aa22.85■■□□□ 1.25
CPNE2-209ENST00000567011 ABCA5Q8WWZ7 1642 aa22.83■■□□□ 1.25
CPNE2-209ENST00000567011 ERCC6L2Q5T890 1561 aa22.75■■□□□ 1.23
CPNE2-209ENST00000567011 WRNQ14191 1432 aaPredicted RBP eCLIP22.74■■□□□ 1.23
CPNE2-209ENST00000567011 GRIN2AQ12879 1464 aa22.73■■□□□ 1.23
CPNE2-209ENST00000567011 ADAMTS12P58397 1594 aa22.69■■□□□ 1.22
CPNE2-209ENST00000567011 CEP170Q5SW79 1584 aa22.68■■□□□ 1.22
CPNE2-209ENST00000567011 NUP160Q12769 1436 aa22.67■■□□□ 1.22
CPNE2-209ENST00000567011 TOP2BQ02880 1626 aa22.66■■□□□ 1.22
CPNE2-209ENST00000567011 BIVM-ERCC5R4GMW8 1640 aa22.64■■□□□ 1.21
CPNE2-209ENST00000567011 FHAD1B1AJZ9 1412 aa22.62■■□□□ 1.21
CPNE2-209ENST00000567011 ERICH3Q5RHP9 1530 aa22.54■■□□□ 1.2
CPNE2-209ENST00000567011 SHROOM2Q13796 1616 aa22.53■■□□□ 1.2
CPNE2-209ENST00000567011 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
CPNE2-209ENST00000567011 AEBP2Q6ZN18 517 aaPredicted RBP22.44■■□□□ 1.18
CPNE2-209ENST00000567011 JPH4Q96JJ6 628 aa22.44■■□□□ 1.18
CPNE2-209ENST00000567011 RUSC2Q8N2Y8 1516 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms