RNA–Protein interactions for RNA: ENST00000567009.5

CDH16-205, Transcript of cadherin 16, humanhuman

TSL 5

Gene CDH16, Length 715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-205ENST00000567009 NISCHQ9Y2I1 1504 aa31.61■■■□□ 2.65
CDH16-205ENST00000567009 ABCC9O60706 1549 aa28.88■■■□□ 2.21
CDH16-205ENST00000567009 CCDC180Q9P1Z9 1646 aa28.35■■■□□ 2.13
CDH16-205ENST00000567009 RB1CC1Q8TDY2 1594 aa27.3■■□□□ 1.96
CDH16-205ENST00000567009 DNAJC5BQ9UF47 199 aa27.28■■□□□ 1.96
CDH16-205ENST00000567009 DCAF8L2P0C7V8 631 aa27.24■■□□□ 1.95
CDH16-205ENST00000567009 NACADO15069 1562 aa27.01■■□□□ 1.92
CDH16-205ENST00000567009 PABPN1Q86U42 306 aaKnown RBP eCLIP26.96■■□□□ 1.91
CDH16-205ENST00000567009 MYO15BQ96JP2 1530 aa26.49■■□□□ 1.83
CDH16-205ENST00000567009 UNC13AQ9UPW8 1703 aa26.33■■□□□ 1.81
CDH16-205ENST00000567009 BICRAQ9NZM4 1560 aa26.32■■□□□ 1.8
CDH16-205ENST00000567009 ZCCHC6Q5VYS8 1495 aaKnown RBP26.09■■□□□ 1.77
CDH16-205ENST00000567009 SHROOM4Q9ULL8 1493 aa26.09■■□□□ 1.77
CDH16-205ENST00000567009 CECR2Q9BXF3 1484 aa26.05■■□□□ 1.76
CDH16-205ENST00000567009 DCAF1Q9Y4B6 1507 aa26.04■■□□□ 1.76
CDH16-205ENST00000567009 SCRIBQ14160 1630 aa25.95■■□□□ 1.74
CDH16-205ENST00000567009 CC2D2AQ9P2K1 1620 aa25.94■■□□□ 1.74
CDH16-205ENST00000567009 EIF4G1Q04637 1599 aaKnown RBP25.82■■□□□ 1.72
CDH16-205ENST00000567009 DNAJC5Q9H3Z4 198 aa25.37■■□□□ 1.65
CDH16-205ENST00000567009 ERCC6Q03468 1493 aa25.08■■□□□ 1.6
CDH16-205ENST00000567009 CUX2O14529 1486 aa24.98■■□□□ 1.59
CDH16-205ENST00000567009 NCAPD3P42695 1498 aa24.97■■□□□ 1.59
CDH16-205ENST00000567009 ATAD2BQ9ULI0 1458 aa24.85■■□□□ 1.57
CDH16-205ENST00000567009 SMARCA2P51531 1590 aa24.78■■□□□ 1.56
CDH16-205ENST00000567009 HMGXB3Q12766 1538 aa24.69■■□□□ 1.54
CDH16-205ENST00000567009 BAZ1BQ9UIG0 1483 aaKnown RBP24.67■■□□□ 1.54
CDH16-205ENST00000567009 SMARCA4P51532 1647 aa24.66■■□□□ 1.54
CDH16-205ENST00000567009 NESP48681 1621 aa24.64■■□□□ 1.53
CDH16-205ENST00000567009 BAZ1AQ9NRL2 1556 aaPredicted RBP24.59■■□□□ 1.53
CDH16-205ENST00000567009 PDS5BQ9NTI5 1447 aa24.47■■□□□ 1.51
CDH16-205ENST00000567009 LAMC3Q9Y6N6 1575 aa24.42■■□□□ 1.5
CDH16-205ENST00000567009 PEG3Q9GZU2 1588 aa24.37■■□□□ 1.49
CDH16-205ENST00000567009 MROH2BQ7Z745 1585 aa24.33■■□□□ 1.49
CDH16-205ENST00000567009 TRIM41Q8WV44 630 aa24.32■■□□□ 1.48
CDH16-205ENST00000567009 THOC2Q8NI27 1593 aaKnown RBP24.31■■□□□ 1.48
CDH16-205ENST00000567009 CADPSQ9ULU8 1353 aa24.29■■□□□ 1.48
CDH16-205ENST00000567009 MRC2Q9UBG0 1479 aa24.17■■□□□ 1.46
CDH16-205ENST00000567009 KIF21AQ7Z4S6 1674 aa24.16■■□□□ 1.46
CDH16-205ENST00000567009 CEP164Q9UPV0 1460 aa24.04■■□□□ 1.44
CDH16-205ENST00000567009 WDR62O43379 1518 aa24.01■■□□□ 1.43
CDH16-205ENST00000567009 OSCARQ8IYS5 282 aa23.99■■□□□ 1.43
CDH16-205ENST00000567009 FANCD2Q9BXW9 1451 aa23.98■■□□□ 1.43
CDH16-205ENST00000567009 WIZO95785 1651 aa23.97■■□□□ 1.43
CDH16-205ENST00000567009 CFTRP13569 1480 aa23.86■■□□□ 1.41
CDH16-205ENST00000567009 RSF1Q96T23 1441 aaPredicted RBP23.79■■□□□ 1.4
CDH16-205ENST00000567009 TOP2AP11388 1531 aaKnown RBP23.72■■□□□ 1.39
CDH16-205ENST00000567009 URB2Q14146 1524 aaKnown RBP23.69■■□□□ 1.38
CDH16-205ENST00000567009 IFT140Q96RY7 1462 aa23.57■■□□□ 1.36
CDH16-205ENST00000567009 CCDC88BA6NC98 1476 aa23.5■■□□□ 1.35
CDH16-205ENST00000567009 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
CDH16-205ENST00000567009 FBLN2P98095 1184 aa23.48■■□□□ 1.35
CDH16-205ENST00000567009 ABCC8Q09428 1581 aa23.46■■□□□ 1.35
CDH16-205ENST00000567009 CYB5RLQ6IPT4 315 aa23.46■■□□□ 1.35
CDH16-205ENST00000567009 TOPBP1Q92547 1522 aa23.43■■□□□ 1.34
CDH16-205ENST00000567009 TRHP20396 242 aaPredicted RBP23.41■■□□□ 1.34
CDH16-205ENST00000567009 RIMBP3CA6NJZ7 1639 aa23.41■■□□□ 1.34
CDH16-205ENST00000567009 RIMBP3BA6NNM3 1639 aa23.41■■□□□ 1.34
CDH16-205ENST00000567009 RIMBP3Q9UFD9 1639 aa23.41■■□□□ 1.34
CDH16-205ENST00000567009 ARHGEF11O15085 1522 aa23.38■■□□□ 1.33
CDH16-205ENST00000567009 AQRO60306 1485 aaKnown RBP eCLIP23.32■■□□□ 1.32
CDH16-205ENST00000567009 PRDM2Q13029 1718 aa23.32■■□□□ 1.32
CDH16-205ENST00000567009 DNMBPQ6XZF7 1577 aa23.3■■□□□ 1.32
CDH16-205ENST00000567009 EIF4G3O43432 1585 aaKnown RBP23.27■■□□□ 1.32
CDH16-205ENST00000567009 CHMP7Q8WUX9 453 aaPredicted RBP23.21■■□□□ 1.31
CDH16-205ENST00000567009 SOGA1O94964 1423 aa23.2■■□□□ 1.3
CDH16-205ENST00000567009 TDRD9Q8NDG6 1382 aaKnown RBP23.18■■□□□ 1.3
CDH16-205ENST00000567009 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
CDH16-205ENST00000567009 RAD54L2Q9Y4B4 1467 aa23.13■■□□□ 1.29
CDH16-205ENST00000567009 TARBP1Q13395 1621 aaKnown RBP23.11■■□□□ 1.29
CDH16-205ENST00000567009 ARAP1Q96P48 1450 aa23.11■■□□□ 1.29
CDH16-205ENST00000567009 CHD1O14646 1710 aa23.08■■□□□ 1.28
CDH16-205ENST00000567009 SNAPC4Q5SXM2 1469 aa23.05■■□□□ 1.28
CDH16-205ENST00000567009 FGD5Q6ZNL6 1462 aa23.01■■□□□ 1.27
CDH16-205ENST00000567009 AEBP2Q6ZN18 517 aaPredicted RBP23■■□□□ 1.27
CDH16-205ENST00000567009 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
CDH16-205ENST00000567009 MAGI1Q96QZ7 1491 aaPredicted RBP22.97■■□□□ 1.27
CDH16-205ENST00000567009 SYNJ1O43426 1573 aa22.96■■□□□ 1.27
CDH16-205ENST00000567009 WDR97A6NE52 1622 aa22.93■■□□□ 1.26
CDH16-205ENST00000567009 SYNJ2O15056 1496 aa22.92■■□□□ 1.26
CDH16-205ENST00000567009 CUX1P39880 1505 aa22.87■■□□□ 1.25
CDH16-205ENST00000567009 CLASP1Q7Z460 1538 aa22.87■■□□□ 1.25
CDH16-205ENST00000567009 GAPVD1Q14C86 1478 aa22.85■■□□□ 1.25
CDH16-205ENST00000567009 SUPT5HO00267 1087 aaKnown RBP22.81■■□□□ 1.24
CDH16-205ENST00000567009 WRNQ14191 1432 aaPredicted RBP eCLIP22.72■■□□□ 1.23
CDH16-205ENST00000567009 ABCA10Q8WWZ4 1543 aa22.71■■□□□ 1.23
CDH16-205ENST00000567009 PBRM1Q86U86 1689 aa22.64■■□□□ 1.21
CDH16-205ENST00000567009 GRIN2AQ12879 1464 aa22.63■■□□□ 1.21
CDH16-205ENST00000567009 ABCA5Q8WWZ7 1642 aa22.58■■□□□ 1.21
CDH16-205ENST00000567009 FHAD1B1AJZ9 1412 aa22.57■■□□□ 1.2
CDH16-205ENST00000567009 NPM1P06748 294 aaKnown RBP eCLIP22.56■■□□□ 1.2
CDH16-205ENST00000567009 NUP160Q12769 1436 aa22.53■■□□□ 1.2
CDH16-205ENST00000567009 JPH4Q96JJ6 628 aa22.5■■□□□ 1.19
CDH16-205ENST00000567009 CEP170Q5SW79 1584 aa22.5■■□□□ 1.19
CDH16-205ENST00000567009 ADAMTS12P58397 1594 aa22.49■■□□□ 1.19
CDH16-205ENST00000567009 ERCC6L2Q5T890 1561 aa22.48■■□□□ 1.19
CDH16-205ENST00000567009 PRG4Q92954 1404 aaPredicted RBP22.47■■□□□ 1.19
CDH16-205ENST00000567009 ERICH3Q5RHP9 1530 aa22.42■■□□□ 1.18
CDH16-205ENST00000567009 FAM69CQ0P6D2 419 aa22.42■■□□□ 1.18
CDH16-205ENST00000567009 TOP2BQ02880 1626 aa22.42■■□□□ 1.18
CDH16-205ENST00000567009 BIVM-ERCC5R4GMW8 1640 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms