RNA–Protein interactions for RNA: ENST00000566910.1

CPNE2-208, Transcript of copine 2, humanhuman

TSL 5

Gene CPNE2, Length 938 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-208ENST00000566910 NISCHQ9Y2I1 1504 aa33.93■■■■□ 3.02
CPNE2-208ENST00000566910 CCDC180Q9P1Z9 1646 aa30.49■■■□□ 2.47
CPNE2-208ENST00000566910 ABCC9O60706 1549 aa30.41■■■□□ 2.46
CPNE2-208ENST00000566910 RB1CC1Q8TDY2 1594 aa28.94■■■□□ 2.22
CPNE2-208ENST00000566910 NACADO15069 1562 aa28.73■■■□□ 2.19
CPNE2-208ENST00000566910 DCAF8L2P0C7V8 631 aa28.68■■■□□ 2.18
CPNE2-208ENST00000566910 UNC13AQ9UPW8 1703 aa28.55■■■□□ 2.16
CPNE2-208ENST00000566910 DNAJC5BQ9UF47 199 aa28.45■■■□□ 2.14
CPNE2-208ENST00000566910 PABPN1Q86U42 306 aaKnown RBP eCLIP28.31■■■□□ 2.12
CPNE2-208ENST00000566910 MYO15BQ96JP2 1530 aa28.27■■■□□ 2.12
CPNE2-208ENST00000566910 BICRAQ9NZM4 1560 aa28.15■■■□□ 2.1
CPNE2-208ENST00000566910 ZCCHC6Q5VYS8 1495 aaKnown RBP28.12■■■□□ 2.09
CPNE2-208ENST00000566910 DCAF1Q9Y4B6 1507 aa27.96■■■□□ 2.07
CPNE2-208ENST00000566910 SCRIBQ14160 1630 aa27.84■■■□□ 2.05
CPNE2-208ENST00000566910 SHROOM4Q9ULL8 1493 aa27.58■■■□□ 2.01
CPNE2-208ENST00000566910 CC2D2AQ9P2K1 1620 aa27.51■■□□□ 1.99
CPNE2-208ENST00000566910 EIF4G1Q04637 1599 aaKnown RBP27.42■■□□□ 1.98
CPNE2-208ENST00000566910 CECR2Q9BXF3 1484 aa27.33■■□□□ 1.97
CPNE2-208ENST00000566910 SMARCA4P51532 1647 aa26.52■■□□□ 1.84
CPNE2-208ENST00000566910 NCAPD3P42695 1498 aa26.47■■□□□ 1.83
CPNE2-208ENST00000566910 ATAD2BQ9ULI0 1458 aa26.44■■□□□ 1.82
CPNE2-208ENST00000566910 SMARCA2P51531 1590 aa26.38■■□□□ 1.81
CPNE2-208ENST00000566910 BAZ1AQ9NRL2 1556 aaPredicted RBP26.33■■□□□ 1.8
CPNE2-208ENST00000566910 HMGXB3Q12766 1538 aa26.32■■□□□ 1.8
CPNE2-208ENST00000566910 ERCC6Q03468 1493 aa26.22■■□□□ 1.79
CPNE2-208ENST00000566910 BAZ1BQ9UIG0 1483 aaKnown RBP26.21■■□□□ 1.79
CPNE2-208ENST00000566910 MROH2BQ7Z745 1585 aa26.2■■□□□ 1.78
CPNE2-208ENST00000566910 PEG3Q9GZU2 1588 aa26.18■■□□□ 1.78
CPNE2-208ENST00000566910 NESP48681 1621 aa26.17■■□□□ 1.78
CPNE2-208ENST00000566910 CUX2O14529 1486 aa26.09■■□□□ 1.77
CPNE2-208ENST00000566910 DNAJC5Q9H3Z4 198 aa26■■□□□ 1.75
CPNE2-208ENST00000566910 WIZO95785 1651 aa25.98■■□□□ 1.75
CPNE2-208ENST00000566910 KIF21AQ7Z4S6 1674 aa25.96■■□□□ 1.75
CPNE2-208ENST00000566910 LAMC3Q9Y6N6 1575 aa25.94■■□□□ 1.74
CPNE2-208ENST00000566910 THOC2Q8NI27 1593 aaKnown RBP25.89■■□□□ 1.73
CPNE2-208ENST00000566910 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
CPNE2-208ENST00000566910 CADPSQ9ULU8 1353 aa25.68■■□□□ 1.7
CPNE2-208ENST00000566910 RSF1Q96T23 1441 aaPredicted RBP25.62■■□□□ 1.69
CPNE2-208ENST00000566910 MRC2Q9UBG0 1479 aa25.53■■□□□ 1.68
CPNE2-208ENST00000566910 TOP2AP11388 1531 aaKnown RBP25.53■■□□□ 1.68
CPNE2-208ENST00000566910 WDR62O43379 1518 aa25.48■■□□□ 1.67
CPNE2-208ENST00000566910 CEP164Q9UPV0 1460 aa25.46■■□□□ 1.67
CPNE2-208ENST00000566910 FANCD2Q9BXW9 1451 aa25.44■■□□□ 1.66
CPNE2-208ENST00000566910 PRDM2Q13029 1718 aa25.43■■□□□ 1.66
CPNE2-208ENST00000566910 CFTRP13569 1480 aa25.41■■□□□ 1.66
CPNE2-208ENST00000566910 URB2Q14146 1524 aaKnown RBP25.26■■□□□ 1.63
CPNE2-208ENST00000566910 CCDC88BA6NC98 1476 aa25.25■■□□□ 1.63
CPNE2-208ENST00000566910 TRIM41Q8WV44 630 aa24.99■■□□□ 1.59
CPNE2-208ENST00000566910 TOPBP1Q92547 1522 aa24.98■■□□□ 1.59
CPNE2-208ENST00000566910 ZNF608Q9ULD9 1512 aaPredicted RBP24.94■■□□□ 1.58
CPNE2-208ENST00000566910 OSCARQ8IYS5 282 aa24.92■■□□□ 1.58
CPNE2-208ENST00000566910 IFT140Q96RY7 1462 aa24.91■■□□□ 1.58
CPNE2-208ENST00000566910 DNMBPQ6XZF7 1577 aa24.91■■□□□ 1.58
CPNE2-208ENST00000566910 ABCC8Q09428 1581 aa24.86■■□□□ 1.57
CPNE2-208ENST00000566910 EIF4G3O43432 1585 aaKnown RBP24.84■■□□□ 1.57
CPNE2-208ENST00000566910 TARBP1Q13395 1621 aaKnown RBP24.8■■□□□ 1.56
CPNE2-208ENST00000566910 CHD1O14646 1710 aa24.77■■□□□ 1.56
CPNE2-208ENST00000566910 RIMBP3CA6NJZ7 1639 aa24.72■■□□□ 1.55
CPNE2-208ENST00000566910 RIMBP3BA6NNM3 1639 aa24.72■■□□□ 1.55
CPNE2-208ENST00000566910 RIMBP3Q9UFD9 1639 aa24.72■■□□□ 1.55
CPNE2-208ENST00000566910 POLA1P09884 1462 aaPredicted RBP24.72■■□□□ 1.55
CPNE2-208ENST00000566910 AQRO60306 1485 aaKnown RBP eCLIP24.71■■□□□ 1.55
CPNE2-208ENST00000566910 RAD54L2Q9Y4B4 1467 aa24.67■■□□□ 1.54
CPNE2-208ENST00000566910 SUPT5HO00267 1087 aaKnown RBP24.61■■□□□ 1.53
CPNE2-208ENST00000566910 CUX1P39880 1505 aa24.61■■□□□ 1.53
CPNE2-208ENST00000566910 FGD5Q6ZNL6 1462 aa24.6■■□□□ 1.53
CPNE2-208ENST00000566910 SOGA1O94964 1423 aa24.6■■□□□ 1.53
CPNE2-208ENST00000566910 ARHGEF11O15085 1522 aa24.56■■□□□ 1.52
CPNE2-208ENST00000566910 TDRD9Q8NDG6 1382 aaKnown RBP24.55■■□□□ 1.52
CPNE2-208ENST00000566910 FBLN2P98095 1184 aa24.55■■□□□ 1.52
CPNE2-208ENST00000566910 WDR97A6NE52 1622 aa24.51■■□□□ 1.51
CPNE2-208ENST00000566910 PBRM1Q86U86 1689 aa24.47■■□□□ 1.51
CPNE2-208ENST00000566910 SNAPC4Q5SXM2 1469 aa24.46■■□□□ 1.51
CPNE2-208ENST00000566910 CYB5RLQ6IPT4 315 aa24.38■■□□□ 1.49
CPNE2-208ENST00000566910 GRIN2BQ13224 1484 aa24.36■■□□□ 1.49
CPNE2-208ENST00000566910 MAGI1Q96QZ7 1491 aaPredicted RBP24.34■■□□□ 1.49
CPNE2-208ENST00000566910 ARAP1Q96P48 1450 aa24.33■■□□□ 1.49
CPNE2-208ENST00000566910 CHMP7Q8WUX9 453 aaPredicted RBP24.33■■□□□ 1.49
CPNE2-208ENST00000566910 CLASP1Q7Z460 1538 aa24.31■■□□□ 1.48
CPNE2-208ENST00000566910 SYNJ1O43426 1573 aa24.31■■□□□ 1.48
CPNE2-208ENST00000566910 ABCA5Q8WWZ7 1642 aa24.31■■□□□ 1.48
CPNE2-208ENST00000566910 GAPVD1Q14C86 1478 aa24.31■■□□□ 1.48
CPNE2-208ENST00000566910 BIVM-ERCC5R4GMW8 1640 aa24.28■■□□□ 1.48
CPNE2-208ENST00000566910 SYNJ2O15056 1496 aa24.27■■□□□ 1.48
CPNE2-208ENST00000566910 ABCA10Q8WWZ4 1543 aa24.27■■□□□ 1.48
CPNE2-208ENST00000566910 TOP2BQ02880 1626 aa24.23■■□□□ 1.47
CPNE2-208ENST00000566910 WRNQ14191 1432 aaPredicted RBP eCLIP24.17■■□□□ 1.46
CPNE2-208ENST00000566910 TRHP20396 242 aaPredicted RBP24.11■■□□□ 1.45
CPNE2-208ENST00000566910 ADAMTS12P58397 1594 aa24.11■■□□□ 1.45
CPNE2-208ENST00000566910 GRIN2AQ12879 1464 aa24.07■■□□□ 1.44
CPNE2-208ENST00000566910 CEP170Q5SW79 1584 aa24.04■■□□□ 1.44
CPNE2-208ENST00000566910 ERCC6L2Q5T890 1561 aa24.03■■□□□ 1.44
CPNE2-208ENST00000566910 ERICH3Q5RHP9 1530 aa23.98■■□□□ 1.43
CPNE2-208ENST00000566910 FHAD1B1AJZ9 1412 aa23.96■■□□□ 1.43
CPNE2-208ENST00000566910 NUP160Q12769 1436 aa23.95■■□□□ 1.42
CPNE2-208ENST00000566910 SHROOM2Q13796 1616 aa23.92■■□□□ 1.42
CPNE2-208ENST00000566910 RUSC2Q8N2Y8 1516 aa23.77■■□□□ 1.4
CPNE2-208ENST00000566910 PRG4Q92954 1404 aaPredicted RBP23.75■■□□□ 1.39
CPNE2-208ENST00000566910 JPH4Q96JJ6 628 aa23.72■■□□□ 1.39
CPNE2-208ENST00000566910 CUL7Q14999 1698 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms