RNA–Protein interactions for RNA: ENST00000566874.1

ATP2C2-209, Transcript of ATPase secretory pathway Ca2+ transporting 2, humanhuman

TSL 5

Gene ATP2C2, Length 292 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C2-209ENST00000566874 NISCHQ9Y2I1 1504 aa22.07■■□□□ 1.12
ATP2C2-209ENST00000566874 CCDC180Q9P1Z9 1646 aa19.74■□□□□ 0.75
ATP2C2-209ENST00000566874 ABCC9O60706 1549 aa19.71■□□□□ 0.75
ATP2C2-209ENST00000566874 RB1CC1Q8TDY2 1594 aa18.77■□□□□ 0.6
ATP2C2-209ENST00000566874 NACADO15069 1562 aa18.68■□□□□ 0.58
ATP2C2-209ENST00000566874 DNAJC5BQ9UF47 199 aa18.6■□□□□ 0.57
ATP2C2-209ENST00000566874 DCAF8L2P0C7V8 631 aa18.54■□□□□ 0.56
ATP2C2-209ENST00000566874 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
ATP2C2-209ENST00000566874 PABPN1Q86U42 306 aaKnown RBP eCLIP18.4■□□□□ 0.54
ATP2C2-209ENST00000566874 UNC13AQ9UPW8 1703 aa18.38■□□□□ 0.53
ATP2C2-209ENST00000566874 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
ATP2C2-209ENST00000566874 ZCCHC6Q5VYS8 1495 aaKnown RBP18.28■□□□□ 0.52
ATP2C2-209ENST00000566874 DCAF1Q9Y4B6 1507 aa18.25■□□□□ 0.51
ATP2C2-209ENST00000566874 SHROOM4Q9ULL8 1493 aa18.01■□□□□ 0.47
ATP2C2-209ENST00000566874 SCRIBQ14160 1630 aa17.96■□□□□ 0.47
ATP2C2-209ENST00000566874 CC2D2AQ9P2K1 1620 aa17.83■□□□□ 0.44
ATP2C2-209ENST00000566874 EIF4G1Q04637 1599 aaKnown RBP17.8■□□□□ 0.44
ATP2C2-209ENST00000566874 CECR2Q9BXF3 1484 aa17.77■□□□□ 0.44
ATP2C2-209ENST00000566874 NCAPD3P42695 1498 aa17.3■□□□□ 0.36
ATP2C2-209ENST00000566874 ATAD2BQ9ULI0 1458 aa17.22■□□□□ 0.35
ATP2C2-209ENST00000566874 SMARCA4P51532 1647 aa17.18■□□□□ 0.34
ATP2C2-209ENST00000566874 SMARCA2P51531 1590 aa17.13■□□□□ 0.33
ATP2C2-209ENST00000566874 HMGXB3Q12766 1538 aa17.11■□□□□ 0.33
ATP2C2-209ENST00000566874 BAZ1AQ9NRL2 1556 aaPredicted RBP17.09■□□□□ 0.33
ATP2C2-209ENST00000566874 PEG3Q9GZU2 1588 aa17.06■□□□□ 0.32
ATP2C2-209ENST00000566874 DNAJC5Q9H3Z4 198 aa17.03■□□□□ 0.32
ATP2C2-209ENST00000566874 MROH2BQ7Z745 1585 aa17.01■□□□□ 0.31
ATP2C2-209ENST00000566874 BAZ1BQ9UIG0 1483 aaKnown RBP17■□□□□ 0.31
ATP2C2-209ENST00000566874 CUX2O14529 1486 aa16.99■□□□□ 0.31
ATP2C2-209ENST00000566874 NESP48681 1621 aa16.99■□□□□ 0.31
ATP2C2-209ENST00000566874 ERCC6Q03468 1493 aa16.97■□□□□ 0.31
ATP2C2-209ENST00000566874 LAMC3Q9Y6N6 1575 aa16.84■□□□□ 0.29
ATP2C2-209ENST00000566874 WIZO95785 1651 aa16.78■□□□□ 0.28
ATP2C2-209ENST00000566874 THOC2Q8NI27 1593 aaKnown RBP16.78■□□□□ 0.28
ATP2C2-209ENST00000566874 CADPSQ9ULU8 1353 aa16.76■□□□□ 0.27
ATP2C2-209ENST00000566874 PDS5BQ9NTI5 1447 aa16.74■□□□□ 0.27
ATP2C2-209ENST00000566874 KIF21AQ7Z4S6 1674 aa16.72■□□□□ 0.27
ATP2C2-209ENST00000566874 RSF1Q96T23 1441 aaPredicted RBP16.69■□□□□ 0.26
ATP2C2-209ENST00000566874 MRC2Q9UBG0 1479 aa16.59■□□□□ 0.25
ATP2C2-209ENST00000566874 WDR62O43379 1518 aa16.57■□□□□ 0.24
ATP2C2-209ENST00000566874 CFTRP13569 1480 aa16.57■□□□□ 0.24
ATP2C2-209ENST00000566874 TOP2AP11388 1531 aaKnown RBP16.56■□□□□ 0.24
ATP2C2-209ENST00000566874 FANCD2Q9BXW9 1451 aa16.53■□□□□ 0.24
ATP2C2-209ENST00000566874 CEP164Q9UPV0 1460 aa16.51■□□□□ 0.23
ATP2C2-209ENST00000566874 URB2Q14146 1524 aaKnown RBP16.42■□□□□ 0.22
ATP2C2-209ENST00000566874 CCDC88BA6NC98 1476 aa16.41■□□□□ 0.22
ATP2C2-209ENST00000566874 PRDM2Q13029 1718 aa16.33■□□□□ 0.2
ATP2C2-209ENST00000566874 OSCARQ8IYS5 282 aa16.25■□□□□ 0.19
ATP2C2-209ENST00000566874 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
ATP2C2-209ENST00000566874 ZNF608Q9ULD9 1512 aaPredicted RBP16.21■□□□□ 0.19
ATP2C2-209ENST00000566874 IFT140Q96RY7 1462 aa16.21■□□□□ 0.19
ATP2C2-209ENST00000566874 ABCC8Q09428 1581 aa16.18■□□□□ 0.18
ATP2C2-209ENST00000566874 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
ATP2C2-209ENST00000566874 DNMBPQ6XZF7 1577 aa16.15■□□□□ 0.18
ATP2C2-209ENST00000566874 TARBP1Q13395 1621 aaKnown RBP16.1■□□□□ 0.17
ATP2C2-209ENST00000566874 EIF4G3O43432 1585 aaKnown RBP16.06■□□□□ 0.16
ATP2C2-209ENST00000566874 AQRO60306 1485 aaKnown RBP eCLIP16.06■□□□□ 0.16
ATP2C2-209ENST00000566874 POLA1P09884 1462 aaPredicted RBP16.06■□□□□ 0.16
ATP2C2-209ENST00000566874 RAD54L2Q9Y4B4 1467 aa16.02■□□□□ 0.15
ATP2C2-209ENST00000566874 RIMBP3CA6NJZ7 1639 aa16.01■□□□□ 0.15
ATP2C2-209ENST00000566874 RIMBP3BA6NNM3 1639 aa16.01■□□□□ 0.15
ATP2C2-209ENST00000566874 RIMBP3Q9UFD9 1639 aa16.01■□□□□ 0.15
ATP2C2-209ENST00000566874 SOGA1O94964 1423 aa16■□□□□ 0.15
ATP2C2-209ENST00000566874 CUX1P39880 1505 aa15.97■□□□□ 0.15
ATP2C2-209ENST00000566874 TDRD9Q8NDG6 1382 aaKnown RBP15.97■□□□□ 0.15
ATP2C2-209ENST00000566874 ARHGEF11O15085 1522 aa15.96■□□□□ 0.15
ATP2C2-209ENST00000566874 FGD5Q6ZNL6 1462 aa15.95■□□□□ 0.14
ATP2C2-209ENST00000566874 CHD1O14646 1710 aa15.94■□□□□ 0.14
ATP2C2-209ENST00000566874 WDR97A6NE52 1622 aa15.9■□□□□ 0.14
ATP2C2-209ENST00000566874 SUPT5HO00267 1087 aaKnown RBP15.89■□□□□ 0.13
ATP2C2-209ENST00000566874 FBLN2P98095 1184 aa15.88■□□□□ 0.13
ATP2C2-209ENST00000566874 SNAPC4Q5SXM2 1469 aa15.86■□□□□ 0.13
ATP2C2-209ENST00000566874 CYB5RLQ6IPT4 315 aa15.85■□□□□ 0.13
ATP2C2-209ENST00000566874 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
ATP2C2-209ENST00000566874 MAGI1Q96QZ7 1491 aaPredicted RBP15.83■□□□□ 0.12
ATP2C2-209ENST00000566874 ARAP1Q96P48 1450 aa15.82■□□□□ 0.12
ATP2C2-209ENST00000566874 CLASP1Q7Z460 1538 aa15.81■□□□□ 0.12
ATP2C2-209ENST00000566874 CHMP7Q8WUX9 453 aaPredicted RBP15.8■□□□□ 0.12
ATP2C2-209ENST00000566874 ABCA10Q8WWZ4 1543 aa15.79■□□□□ 0.12
ATP2C2-209ENST00000566874 SYNJ2O15056 1496 aa15.78■□□□□ 0.12
ATP2C2-209ENST00000566874 GAPVD1Q14C86 1478 aa15.78■□□□□ 0.12
ATP2C2-209ENST00000566874 ABCA5Q8WWZ7 1642 aa15.76■□□□□ 0.11
ATP2C2-209ENST00000566874 SYNJ1O43426 1573 aa15.74■□□□□ 0.11
ATP2C2-209ENST00000566874 PBRM1Q86U86 1689 aa15.73■□□□□ 0.11
ATP2C2-209ENST00000566874 WRNQ14191 1432 aaPredicted RBP eCLIP15.72■□□□□ 0.11
ATP2C2-209ENST00000566874 TOP2BQ02880 1626 aa15.71■□□□□ 0.11
ATP2C2-209ENST00000566874 BIVM-ERCC5R4GMW8 1640 aa15.7■□□□□ 0.1
ATP2C2-209ENST00000566874 GRIN2AQ12879 1464 aa15.63■□□□□ 0.09
ATP2C2-209ENST00000566874 NUP160Q12769 1436 aa15.61■□□□□ 0.09
ATP2C2-209ENST00000566874 ADAMTS12P58397 1594 aa15.61■□□□□ 0.09
ATP2C2-209ENST00000566874 TRHP20396 242 aaPredicted RBP15.6■□□□□ 0.09
ATP2C2-209ENST00000566874 FHAD1B1AJZ9 1412 aa15.6■□□□□ 0.09
ATP2C2-209ENST00000566874 ERICH3Q5RHP9 1530 aa15.58■□□□□ 0.09
ATP2C2-209ENST00000566874 CEP170Q5SW79 1584 aa15.58■□□□□ 0.09
ATP2C2-209ENST00000566874 ERCC6L2Q5T890 1561 aa15.57■□□□□ 0.08
ATP2C2-209ENST00000566874 SHROOM2Q13796 1616 aa15.54■□□□□ 0.08
ATP2C2-209ENST00000566874 JPH4Q96JJ6 628 aa15.46■□□□□ 0.07
ATP2C2-209ENST00000566874 IGF1RP08069 1367 aa15.45■□□□□ 0.06
ATP2C2-209ENST00000566874 PRG4Q92954 1404 aaPredicted RBP15.43■□□□□ 0.06
ATP2C2-209ENST00000566874 RUSC2Q8N2Y8 1516 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms