RNA–Protein interactions for RNA: ENST00000566872.5

SCAMP5-211, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 4

Gene SCAMP5, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-211ENST00000566872 NISCHQ9Y2I1 1504 aa33.43■■■□□ 2.94
SCAMP5-211ENST00000566872 CCDC180Q9P1Z9 1646 aa29.42■■■□□ 2.3
SCAMP5-211ENST00000566872 ABCC9O60706 1549 aa29.1■■■□□ 2.25
SCAMP5-211ENST00000566872 ZCCHC6Q5VYS8 1495 aaKnown RBP28.04■■■□□ 2.08
SCAMP5-211ENST00000566872 DCAF1Q9Y4B6 1507 aa27.82■■■□□ 2.04
SCAMP5-211ENST00000566872 MYO15BQ96JP2 1530 aa27.69■■■□□ 2.02
SCAMP5-211ENST00000566872 RB1CC1Q8TDY2 1594 aa27.58■■■□□ 2.01
SCAMP5-211ENST00000566872 DNAJC5BQ9UF47 199 aa27.57■■■□□ 2
SCAMP5-211ENST00000566872 NACADO15069 1562 aa27.48■■□□□ 1.99
SCAMP5-211ENST00000566872 DCAF8L2P0C7V8 631 aa27.34■■□□□ 1.97
SCAMP5-211ENST00000566872 UNC13AQ9UPW8 1703 aa27.08■■□□□ 1.93
SCAMP5-211ENST00000566872 PABPN1Q86U42 306 aaKnown RBP eCLIP27.04■■□□□ 1.92
SCAMP5-211ENST00000566872 BICRAQ9NZM4 1560 aa26.86■■□□□ 1.89
SCAMP5-211ENST00000566872 SCRIBQ14160 1630 aa26.75■■□□□ 1.87
SCAMP5-211ENST00000566872 SHROOM4Q9ULL8 1493 aa26.65■■□□□ 1.86
SCAMP5-211ENST00000566872 CC2D2AQ9P2K1 1620 aa26.3■■□□□ 1.8
SCAMP5-211ENST00000566872 CECR2Q9BXF3 1484 aa26.23■■□□□ 1.79
SCAMP5-211ENST00000566872 EIF4G1Q04637 1599 aaKnown RBP26.17■■□□□ 1.78
SCAMP5-211ENST00000566872 BAZ1AQ9NRL2 1556 aaPredicted RBP25.87■■□□□ 1.73
SCAMP5-211ENST00000566872 SMARCA4P51532 1647 aa25.75■■□□□ 1.71
SCAMP5-211ENST00000566872 RSF1Q96T23 1441 aaPredicted RBP25.75■■□□□ 1.71
SCAMP5-211ENST00000566872 MROH2BQ7Z745 1585 aa25.71■■□□□ 1.71
SCAMP5-211ENST00000566872 PEG3Q9GZU2 1588 aa25.59■■□□□ 1.69
SCAMP5-211ENST00000566872 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
SCAMP5-211ENST00000566872 SMARCA2P51531 1590 aa25.47■■□□□ 1.67
SCAMP5-211ENST00000566872 DNAJC5Q9H3Z4 198 aa25.45■■□□□ 1.66
SCAMP5-211ENST00000566872 WIZO95785 1651 aa25.43■■□□□ 1.66
SCAMP5-211ENST00000566872 ATAD2BQ9ULI0 1458 aa25.42■■□□□ 1.66
SCAMP5-211ENST00000566872 NCAPD3P42695 1498 aa25.34■■□□□ 1.65
SCAMP5-211ENST00000566872 TOP2AP11388 1531 aaKnown RBP25.32■■□□□ 1.64
SCAMP5-211ENST00000566872 HMGXB3Q12766 1538 aa25.3■■□□□ 1.64
SCAMP5-211ENST00000566872 BAZ1BQ9UIG0 1483 aaKnown RBP25.23■■□□□ 1.63
SCAMP5-211ENST00000566872 CUX2O14529 1486 aa25.17■■□□□ 1.62
SCAMP5-211ENST00000566872 ERCC6Q03468 1493 aa25.1■■□□□ 1.61
SCAMP5-211ENST00000566872 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
SCAMP5-211ENST00000566872 NESP48681 1621 aa24.96■■□□□ 1.59
SCAMP5-211ENST00000566872 THOC2Q8NI27 1593 aaKnown RBP24.77■■□□□ 1.56
SCAMP5-211ENST00000566872 LAMC3Q9Y6N6 1575 aa24.71■■□□□ 1.55
SCAMP5-211ENST00000566872 KIF21AQ7Z4S6 1674 aa24.66■■□□□ 1.54
SCAMP5-211ENST00000566872 CFTRP13569 1480 aa24.65■■□□□ 1.54
SCAMP5-211ENST00000566872 CADPSQ9ULU8 1353 aa24.6■■□□□ 1.53
SCAMP5-211ENST00000566872 PDS5BQ9NTI5 1447 aa24.54■■□□□ 1.52
SCAMP5-211ENST00000566872 PRDM2Q13029 1718 aa24.49■■□□□ 1.51
SCAMP5-211ENST00000566872 MRC2Q9UBG0 1479 aa24.38■■□□□ 1.49
SCAMP5-211ENST00000566872 CHIC1Q5VXU3 224 aa24.37■■□□□ 1.49
SCAMP5-211ENST00000566872 WDR62O43379 1518 aa24.35■■□□□ 1.49
SCAMP5-211ENST00000566872 FANCD2Q9BXW9 1451 aa24.28■■□□□ 1.48
SCAMP5-211ENST00000566872 WRNQ14191 1432 aaPredicted RBP eCLIP24.25■■□□□ 1.47
SCAMP5-211ENST00000566872 ABCC8Q09428 1581 aa24.21■■□□□ 1.47
SCAMP5-211ENST00000566872 CEP164Q9UPV0 1460 aa24.21■■□□□ 1.47
SCAMP5-211ENST00000566872 TRIM41Q8WV44 630 aa24.19■■□□□ 1.46
SCAMP5-211ENST00000566872 TOP2BQ02880 1626 aa24.14■■□□□ 1.46
SCAMP5-211ENST00000566872 BIVM-ERCC5R4GMW8 1640 aa24.13■■□□□ 1.45
SCAMP5-211ENST00000566872 SYNJ1O43426 1573 aa24.11■■□□□ 1.45
SCAMP5-211ENST00000566872 CUX1P39880 1505 aa24.1■■□□□ 1.45
SCAMP5-211ENST00000566872 DNMBPQ6XZF7 1577 aa24.06■■□□□ 1.44
SCAMP5-211ENST00000566872 URB2Q14146 1524 aaKnown RBP24.03■■□□□ 1.44
SCAMP5-211ENST00000566872 TOPBP1Q92547 1522 aa23.99■■□□□ 1.43
SCAMP5-211ENST00000566872 OSCARQ8IYS5 282 aa23.95■■□□□ 1.42
SCAMP5-211ENST00000566872 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
SCAMP5-211ENST00000566872 EEA1Q15075 1411 aa23.85■■□□□ 1.41
SCAMP5-211ENST00000566872 POLA1P09884 1462 aaPredicted RBP23.84■■□□□ 1.41
SCAMP5-211ENST00000566872 ZNF608Q9ULD9 1512 aaPredicted RBP23.77■■□□□ 1.4
SCAMP5-211ENST00000566872 ABCA10Q8WWZ4 1543 aa23.75■■□□□ 1.39
SCAMP5-211ENST00000566872 IFT140Q96RY7 1462 aa23.75■■□□□ 1.39
SCAMP5-211ENST00000566872 RIMBP3CA6NJZ7 1639 aa23.74■■□□□ 1.39
SCAMP5-211ENST00000566872 RIMBP3BA6NNM3 1639 aa23.74■■□□□ 1.39
SCAMP5-211ENST00000566872 RIMBP3Q9UFD9 1639 aa23.74■■□□□ 1.39
SCAMP5-211ENST00000566872 SOGA1O94964 1423 aa23.73■■□□□ 1.39
SCAMP5-211ENST00000566872 KIF27Q86VH2 1401 aa23.7■■□□□ 1.38
SCAMP5-211ENST00000566872 WDR97A6NE52 1622 aa23.68■■□□□ 1.38
SCAMP5-211ENST00000566872 TARBP1Q13395 1621 aaKnown RBP23.68■■□□□ 1.38
SCAMP5-211ENST00000566872 RAD54L2Q9Y4B4 1467 aa23.65■■□□□ 1.38
SCAMP5-211ENST00000566872 EIF4G3O43432 1585 aaKnown RBP23.62■■□□□ 1.37
SCAMP5-211ENST00000566872 ARHGEF11O15085 1522 aa23.62■■□□□ 1.37
SCAMP5-211ENST00000566872 RUSC2Q8N2Y8 1516 aa23.59■■□□□ 1.37
SCAMP5-211ENST00000566872 CSRNP3Q8WYN3 585 aa23.57■■□□□ 1.36
SCAMP5-211ENST00000566872 ABCA5Q8WWZ7 1642 aa23.57■■□□□ 1.36
SCAMP5-211ENST00000566872 CHD1O14646 1710 aa23.53■■□□□ 1.36
SCAMP5-211ENST00000566872 AQRO60306 1485 aaKnown RBP eCLIP23.5■■□□□ 1.35
SCAMP5-211ENST00000566872 GAPVD1Q14C86 1478 aa23.5■■□□□ 1.35
SCAMP5-211ENST00000566872 ERICH3Q5RHP9 1530 aa23.49■■□□□ 1.35
SCAMP5-211ENST00000566872 KIF21BO75037 1637 aa23.49■■□□□ 1.35
SCAMP5-211ENST00000566872 IGF1RP08069 1367 aa23.49■■□□□ 1.35
SCAMP5-211ENST00000566872 FAM9AQ8IZU1 332 aaPredicted RBP23.48■■□□□ 1.35
SCAMP5-211ENST00000566872 PRXQ9BXM0 1461 aa23.48■■□□□ 1.35
SCAMP5-211ENST00000566872 TDRD9Q8NDG6 1382 aaKnown RBP23.45■■□□□ 1.34
SCAMP5-211ENST00000566872 CUL7Q14999 1698 aa23.42■■□□□ 1.34
SCAMP5-211ENST00000566872 CYB5RLQ6IPT4 315 aa23.42■■□□□ 1.34
SCAMP5-211ENST00000566872 GRIN2BQ13224 1484 aa23.41■■□□□ 1.34
SCAMP5-211ENST00000566872 GOLGA3Q08378 1498 aa23.39■■□□□ 1.34
SCAMP5-211ENST00000566872 ARAP1Q96P48 1450 aa23.38■■□□□ 1.33
SCAMP5-211ENST00000566872 PBRM1Q86U86 1689 aa23.35■■□□□ 1.33
SCAMP5-211ENST00000566872 CARMIL1Q5VZK9 1371 aa23.35■■□□□ 1.33
SCAMP5-211ENST00000566872 FBLN2P98095 1184 aa23.34■■□□□ 1.33
SCAMP5-211ENST00000566872 RAPGEF2Q9Y4G8 1499 aa23.32■■□□□ 1.32
SCAMP5-211ENST00000566872 MAGI1Q96QZ7 1491 aaPredicted RBP23.3■■□□□ 1.32
SCAMP5-211ENST00000566872 FHAD1B1AJZ9 1412 aa23.29■■□□□ 1.32
SCAMP5-211ENST00000566872 ADAMTS12P58397 1594 aa23.27■■□□□ 1.32
SCAMP5-211ENST00000566872 TNIKQ9UKE5 1360 aa23.27■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms