RNA–Protein interactions for RNA: ENST00000566686.5

CRX-204, Transcript of cone-rod homeobox, humanhuman

TSL 5

Gene CRX, Length 433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-204ENST00000566686 NISCHQ9Y2I1 1504 aa30.79■■■□□ 2.52
CRX-204ENST00000566686 CCDC180Q9P1Z9 1646 aa27.62■■■□□ 2.01
CRX-204ENST00000566686 ABCC9O60706 1549 aa27.46■■□□□ 1.99
CRX-204ENST00000566686 RB1CC1Q8TDY2 1594 aa26.23■■□□□ 1.79
CRX-204ENST00000566686 NACADO15069 1562 aa26.04■■□□□ 1.76
CRX-204ENST00000566686 DNAJC5BQ9UF47 199 aa25.83■■□□□ 1.73
CRX-204ENST00000566686 DCAF8L2P0C7V8 631 aa25.81■■□□□ 1.72
CRX-204ENST00000566686 MYO15BQ96JP2 1530 aa25.75■■□□□ 1.71
CRX-204ENST00000566686 UNC13AQ9UPW8 1703 aa25.74■■□□□ 1.71
CRX-204ENST00000566686 ZCCHC6Q5VYS8 1495 aaKnown RBP25.59■■□□□ 1.69
CRX-204ENST00000566686 BICRAQ9NZM4 1560 aa25.52■■□□□ 1.68
CRX-204ENST00000566686 DCAF1Q9Y4B6 1507 aa25.44■■□□□ 1.66
CRX-204ENST00000566686 PABPN1Q86U42 306 aaKnown RBP eCLIP25.41■■□□□ 1.66
CRX-204ENST00000566686 SHROOM4Q9ULL8 1493 aa25.31■■□□□ 1.64
CRX-204ENST00000566686 SCRIBQ14160 1630 aa25.1■■□□□ 1.61
CRX-204ENST00000566686 CC2D2AQ9P2K1 1620 aa24.93■■□□□ 1.58
CRX-204ENST00000566686 EIF4G1Q04637 1599 aaKnown RBP24.87■■□□□ 1.57
CRX-204ENST00000566686 CECR2Q9BXF3 1484 aa24.81■■□□□ 1.56
CRX-204ENST00000566686 NCAPD3P42695 1498 aa24■■□□□ 1.43
CRX-204ENST00000566686 SMARCA4P51532 1647 aa23.97■■□□□ 1.43
CRX-204ENST00000566686 CUX2O14529 1486 aa23.92■■□□□ 1.42
CRX-204ENST00000566686 ATAD2BQ9ULI0 1458 aa23.92■■□□□ 1.42
CRX-204ENST00000566686 HMGXB3Q12766 1538 aa23.91■■□□□ 1.42
CRX-204ENST00000566686 DNAJC5Q9H3Z4 198 aa23.9■■□□□ 1.42
CRX-204ENST00000566686 BAZ1AQ9NRL2 1556 aaPredicted RBP23.86■■□□□ 1.41
CRX-204ENST00000566686 SMARCA2P51531 1590 aa23.85■■□□□ 1.41
CRX-204ENST00000566686 MROH2BQ7Z745 1585 aa23.76■■□□□ 1.39
CRX-204ENST00000566686 PEG3Q9GZU2 1588 aa23.75■■□□□ 1.39
CRX-204ENST00000566686 ERCC6Q03468 1493 aa23.71■■□□□ 1.39
CRX-204ENST00000566686 BAZ1BQ9UIG0 1483 aaKnown RBP23.68■■□□□ 1.38
CRX-204ENST00000566686 THOC2Q8NI27 1593 aaKnown RBP23.59■■□□□ 1.37
CRX-204ENST00000566686 NESP48681 1621 aa23.57■■□□□ 1.36
CRX-204ENST00000566686 LAMC3Q9Y6N6 1575 aa23.54■■□□□ 1.36
CRX-204ENST00000566686 WIZO95785 1651 aa23.48■■□□□ 1.35
CRX-204ENST00000566686 KIF21AQ7Z4S6 1674 aa23.4■■□□□ 1.34
CRX-204ENST00000566686 RSF1Q96T23 1441 aaPredicted RBP23.34■■□□□ 1.33
CRX-204ENST00000566686 PDS5BQ9NTI5 1447 aa23.26■■□□□ 1.31
CRX-204ENST00000566686 CADPSQ9ULU8 1353 aa23.22■■□□□ 1.31
CRX-204ENST00000566686 WDR62O43379 1518 aa23.18■■□□□ 1.3
CRX-204ENST00000566686 TOP2AP11388 1531 aaKnown RBP23.18■■□□□ 1.3
CRX-204ENST00000566686 MRC2Q9UBG0 1479 aa23.14■■□□□ 1.29
CRX-204ENST00000566686 CFTRP13569 1480 aa23.03■■□□□ 1.28
CRX-204ENST00000566686 CEP164Q9UPV0 1460 aa22.99■■□□□ 1.27
CRX-204ENST00000566686 FANCD2Q9BXW9 1451 aa22.97■■□□□ 1.27
CRX-204ENST00000566686 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
CRX-204ENST00000566686 PRDM2Q13029 1718 aa22.88■■□□□ 1.25
CRX-204ENST00000566686 URB2Q14146 1524 aaKnown RBP22.79■■□□□ 1.24
CRX-204ENST00000566686 TOPBP1Q92547 1522 aa22.57■■□□□ 1.2
CRX-204ENST00000566686 TRIM41Q8WV44 630 aa22.57■■□□□ 1.2
CRX-204ENST00000566686 IFT140Q96RY7 1462 aa22.55■■□□□ 1.2
CRX-204ENST00000566686 OSCARQ8IYS5 282 aa22.51■■□□□ 1.19
CRX-204ENST00000566686 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
CRX-204ENST00000566686 ABCC8Q09428 1581 aa22.49■■□□□ 1.19
CRX-204ENST00000566686 RIMBP3CA6NJZ7 1639 aa22.49■■□□□ 1.19
CRX-204ENST00000566686 RIMBP3BA6NNM3 1639 aa22.49■■□□□ 1.19
CRX-204ENST00000566686 RIMBP3Q9UFD9 1639 aa22.49■■□□□ 1.19
CRX-204ENST00000566686 EIF4G3O43432 1585 aaKnown RBP22.48■■□□□ 1.19
CRX-204ENST00000566686 ZNF608Q9ULD9 1512 aaPredicted RBP22.47■■□□□ 1.19
CRX-204ENST00000566686 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
CRX-204ENST00000566686 TARBP1Q13395 1621 aaKnown RBP22.41■■□□□ 1.18
CRX-204ENST00000566686 ARHGEF11O15085 1522 aa22.38■■□□□ 1.17
CRX-204ENST00000566686 POLA1P09884 1462 aaPredicted RBP22.36■■□□□ 1.17
CRX-204ENST00000566686 CHD1O14646 1710 aa22.33■■□□□ 1.17
CRX-204ENST00000566686 CUX1P39880 1505 aa22.3■■□□□ 1.16
CRX-204ENST00000566686 RAD54L2Q9Y4B4 1467 aa22.28■■□□□ 1.16
CRX-204ENST00000566686 WDR97A6NE52 1622 aa22.28■■□□□ 1.16
CRX-204ENST00000566686 AQRO60306 1485 aaKnown RBP eCLIP22.28■■□□□ 1.16
CRX-204ENST00000566686 FGD5Q6ZNL6 1462 aa22.26■■□□□ 1.15
CRX-204ENST00000566686 SOGA1O94964 1423 aa22.23■■□□□ 1.15
CRX-204ENST00000566686 TDRD9Q8NDG6 1382 aaKnown RBP22.17■■□□□ 1.14
CRX-204ENST00000566686 ARAP1Q96P48 1450 aa22.15■■□□□ 1.14
CRX-204ENST00000566686 CLASP1Q7Z460 1538 aa22.12■■□□□ 1.13
CRX-204ENST00000566686 SNAPC4Q5SXM2 1469 aa22.05■■□□□ 1.12
CRX-204ENST00000566686 MAGI1Q96QZ7 1491 aaPredicted RBP22.05■■□□□ 1.12
CRX-204ENST00000566686 FBLN2P98095 1184 aa22.02■■□□□ 1.12
CRX-204ENST00000566686 ABCA10Q8WWZ4 1543 aa22.01■■□□□ 1.11
CRX-204ENST00000566686 SYNJ1O43426 1573 aa22.01■■□□□ 1.11
CRX-204ENST00000566686 GRIN2BQ13224 1484 aa22.01■■□□□ 1.11
CRX-204ENST00000566686 BIVM-ERCC5R4GMW8 1640 aa22■■□□□ 1.11
CRX-204ENST00000566686 TOP2BQ02880 1626 aa21.99■■□□□ 1.11
CRX-204ENST00000566686 WRNQ14191 1432 aaPredicted RBP eCLIP21.99■■□□□ 1.11
CRX-204ENST00000566686 PBRM1Q86U86 1689 aa21.98■■□□□ 1.11
CRX-204ENST00000566686 GAPVD1Q14C86 1478 aa21.98■■□□□ 1.11
CRX-204ENST00000566686 ABCA5Q8WWZ7 1642 aa21.98■■□□□ 1.11
CRX-204ENST00000566686 SYNJ2O15056 1496 aa21.94■■□□□ 1.1
CRX-204ENST00000566686 CYB5RLQ6IPT4 315 aa21.92■■□□□ 1.1
CRX-204ENST00000566686 CHMP7Q8WUX9 453 aaPredicted RBP21.9■■□□□ 1.1
CRX-204ENST00000566686 ADAMTS12P58397 1594 aa21.78■■□□□ 1.08
CRX-204ENST00000566686 GRIN2AQ12879 1464 aa21.75■■□□□ 1.07
CRX-204ENST00000566686 ERICH3Q5RHP9 1530 aa21.73■■□□□ 1.07
CRX-204ENST00000566686 FHAD1B1AJZ9 1412 aa21.71■■□□□ 1.07
CRX-204ENST00000566686 SHROOM2Q13796 1616 aa21.7■■□□□ 1.06
CRX-204ENST00000566686 NUP160Q12769 1436 aa21.69■■□□□ 1.06
CRX-204ENST00000566686 CEP170Q5SW79 1584 aa21.68■■□□□ 1.06
CRX-204ENST00000566686 TRHP20396 242 aaPredicted RBP21.67■■□□□ 1.06
CRX-204ENST00000566686 ERCC6L2Q5T890 1561 aa21.64■■□□□ 1.05
CRX-204ENST00000566686 KIF27Q86VH2 1401 aa21.54■■□□□ 1.04
CRX-204ENST00000566686 IGF1RP08069 1367 aa21.52■■□□□ 1.04
CRX-204ENST00000566686 RUSC2Q8N2Y8 1516 aa21.49■■□□□ 1.03
CRX-204ENST00000566686 KIF13AQ9H1H9 1805 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms