RNA–Protein interactions for RNA: ENST00000566670.2

GRIN2A-208, Transcript of glutamate ionotropic receptor NMDA type subunit 2A, humanhuman

TSL 2

Gene GRIN2A, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2A-208ENST00000566670 NISCHQ9Y2I1 1504 aa20.82■□□□□ 0.92
GRIN2A-208ENST00000566670 ABCC9O60706 1549 aa18.67■□□□□ 0.58
GRIN2A-208ENST00000566670 CCDC180Q9P1Z9 1646 aa18.67■□□□□ 0.58
GRIN2A-208ENST00000566670 RB1CC1Q8TDY2 1594 aa17.78■□□□□ 0.44
GRIN2A-208ENST00000566670 NACADO15069 1562 aa17.66■□□□□ 0.42
GRIN2A-208ENST00000566670 DCAF8L2P0C7V8 631 aa17.61■□□□□ 0.41
GRIN2A-208ENST00000566670 DNAJC5BQ9UF47 199 aa17.55■□□□□ 0.4
GRIN2A-208ENST00000566670 MYO15BQ96JP2 1530 aa17.42■□□□□ 0.38
GRIN2A-208ENST00000566670 PABPN1Q86U42 306 aaKnown RBP eCLIP17.4■□□□□ 0.38
GRIN2A-208ENST00000566670 UNC13AQ9UPW8 1703 aa17.37■□□□□ 0.37
GRIN2A-208ENST00000566670 BICRAQ9NZM4 1560 aa17.26■□□□□ 0.35
GRIN2A-208ENST00000566670 ZCCHC6Q5VYS8 1495 aaKnown RBP17.23■□□□□ 0.35
GRIN2A-208ENST00000566670 DCAF1Q9Y4B6 1507 aa17.2■□□□□ 0.34
GRIN2A-208ENST00000566670 SHROOM4Q9ULL8 1493 aa17.02■□□□□ 0.32
GRIN2A-208ENST00000566670 SCRIBQ14160 1630 aa16.99■□□□□ 0.31
GRIN2A-208ENST00000566670 CC2D2AQ9P2K1 1620 aa16.86■□□□□ 0.29
GRIN2A-208ENST00000566670 EIF4G1Q04637 1599 aaKnown RBP16.82■□□□□ 0.28
GRIN2A-208ENST00000566670 CECR2Q9BXF3 1484 aa16.82■□□□□ 0.28
GRIN2A-208ENST00000566670 NCAPD3P42695 1498 aa16.32■□□□□ 0.2
GRIN2A-208ENST00000566670 ATAD2BQ9ULI0 1458 aa16.25■□□□□ 0.19
GRIN2A-208ENST00000566670 SMARCA4P51532 1647 aa16.23■□□□□ 0.19
GRIN2A-208ENST00000566670 SMARCA2P51531 1590 aa16.21■□□□□ 0.18
GRIN2A-208ENST00000566670 HMGXB3Q12766 1538 aa16.17■□□□□ 0.18
GRIN2A-208ENST00000566670 BAZ1AQ9NRL2 1556 aaPredicted RBP16.15■□□□□ 0.18
GRIN2A-208ENST00000566670 DNAJC5Q9H3Z4 198 aa16.14■□□□□ 0.17
GRIN2A-208ENST00000566670 ERCC6Q03468 1493 aa16.11■□□□□ 0.17
GRIN2A-208ENST00000566670 CUX2O14529 1486 aa16.09■□□□□ 0.17
GRIN2A-208ENST00000566670 BAZ1BQ9UIG0 1483 aaKnown RBP16.09■□□□□ 0.17
GRIN2A-208ENST00000566670 PEG3Q9GZU2 1588 aa16.08■□□□□ 0.16
GRIN2A-208ENST00000566670 NESP48681 1621 aa16.04■□□□□ 0.16
GRIN2A-208ENST00000566670 MROH2BQ7Z745 1585 aa16.04■□□□□ 0.16
GRIN2A-208ENST00000566670 LAMC3Q9Y6N6 1575 aa15.93■□□□□ 0.14
GRIN2A-208ENST00000566670 PDS5BQ9NTI5 1447 aa15.85■□□□□ 0.13
GRIN2A-208ENST00000566670 THOC2Q8NI27 1593 aaKnown RBP15.85■□□□□ 0.13
GRIN2A-208ENST00000566670 WIZO95785 1651 aa15.84■□□□□ 0.13
GRIN2A-208ENST00000566670 CADPSQ9ULU8 1353 aa15.82■□□□□ 0.12
GRIN2A-208ENST00000566670 KIF21AQ7Z4S6 1674 aa15.82■□□□□ 0.12
GRIN2A-208ENST00000566670 RSF1Q96T23 1441 aaPredicted RBP15.71■□□□□ 0.11
GRIN2A-208ENST00000566670 MRC2Q9UBG0 1479 aa15.7■□□□□ 0.1
GRIN2A-208ENST00000566670 WDR62O43379 1518 aa15.65■□□□□ 0.1
GRIN2A-208ENST00000566670 CFTRP13569 1480 aa15.64■□□□□ 0.09
GRIN2A-208ENST00000566670 CEP164Q9UPV0 1460 aa15.64■□□□□ 0.09
GRIN2A-208ENST00000566670 TOP2AP11388 1531 aaKnown RBP15.63■□□□□ 0.09
GRIN2A-208ENST00000566670 FANCD2Q9BXW9 1451 aa15.62■□□□□ 0.09
GRIN2A-208ENST00000566670 URB2Q14146 1524 aaKnown RBP15.49■□□□□ 0.07
GRIN2A-208ENST00000566670 CCDC88BA6NC98 1476 aa15.47■□□□□ 0.07
GRIN2A-208ENST00000566670 PRDM2Q13029 1718 aa15.46■□□□□ 0.06
GRIN2A-208ENST00000566670 OSCARQ8IYS5 282 aa15.41■□□□□ 0.06
GRIN2A-208ENST00000566670 TRIM41Q8WV44 630 aa15.39■□□□□ 0.05
GRIN2A-208ENST00000566670 IFT140Q96RY7 1462 aa15.33■□□□□ 0.04
GRIN2A-208ENST00000566670 TOPBP1Q92547 1522 aa15.33■□□□□ 0.04
GRIN2A-208ENST00000566670 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
GRIN2A-208ENST00000566670 ZNF608Q9ULD9 1512 aaPredicted RBP15.3■□□□□ 0.04
GRIN2A-208ENST00000566670 DNMBPQ6XZF7 1577 aa15.26■□□□□ 0.03
GRIN2A-208ENST00000566670 EIF4G3O43432 1585 aaKnown RBP15.19■□□□□ 0.02
GRIN2A-208ENST00000566670 TARBP1Q13395 1621 aaKnown RBP15.19■□□□□ 0.02
GRIN2A-208ENST00000566670 AQRO60306 1485 aaKnown RBP eCLIP15.17■□□□□ 0.02
GRIN2A-208ENST00000566670 POLA1P09884 1462 aaPredicted RBP15.16■□□□□ 0.02
GRIN2A-208ENST00000566670 RIMBP3CA6NJZ7 1639 aa15.15■□□□□ 0.02
GRIN2A-208ENST00000566670 RIMBP3BA6NNM3 1639 aa15.15■□□□□ 0.02
GRIN2A-208ENST00000566670 RIMBP3Q9UFD9 1639 aa15.15■□□□□ 0.02
GRIN2A-208ENST00000566670 SOGA1O94964 1423 aa15.13■□□□□ 0.01
GRIN2A-208ENST00000566670 RAD54L2Q9Y4B4 1467 aa15.12■□□□□ 0.01
GRIN2A-208ENST00000566670 ARHGEF11O15085 1522 aa15.11■□□□□ 0.01
GRIN2A-208ENST00000566670 CHD1O14646 1710 aa15.1■□□□□ 0.01
GRIN2A-208ENST00000566670 TDRD9Q8NDG6 1382 aaKnown RBP15.1■□□□□ 0.01
GRIN2A-208ENST00000566670 FBLN2P98095 1184 aa15.09■□□□□ 0.01
GRIN2A-208ENST00000566670 FGD5Q6ZNL6 1462 aa15.08■□□□□ 0
GRIN2A-208ENST00000566670 CUX1P39880 1505 aa15.06■□□□□ 0
GRIN2A-208ENST00000566670 SUPT5HO00267 1087 aaKnown RBP15.04■□□□□ -0
GRIN2A-208ENST00000566670 CYB5RLQ6IPT4 315 aa15.04■□□□□ -0
GRIN2A-208ENST00000566670 WDR97A6NE52 1622 aa15.03■□□□□ -0
GRIN2A-208ENST00000566670 CHMP7Q8WUX9 453 aaPredicted RBP14.99□□□□□ -0.01
GRIN2A-208ENST00000566670 SNAPC4Q5SXM2 1469 aa14.99□□□□□ -0.01
GRIN2A-208ENST00000566670 GRIN2BQ13224 1484 aa14.98□□□□□ -0.01
GRIN2A-208ENST00000566670 MAGI1Q96QZ7 1491 aaPredicted RBP14.97□□□□□ -0.01
GRIN2A-208ENST00000566670 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
GRIN2A-208ENST00000566670 SYNJ2O15056 1496 aa14.93□□□□□ -0.02
GRIN2A-208ENST00000566670 GAPVD1Q14C86 1478 aa14.93□□□□□ -0.02
GRIN2A-208ENST00000566670 CLASP1Q7Z460 1538 aa14.92□□□□□ -0.02
GRIN2A-208ENST00000566670 SYNJ1O43426 1573 aa14.92□□□□□ -0.02
GRIN2A-208ENST00000566670 ABCA10Q8WWZ4 1543 aa14.91□□□□□ -0.02
GRIN2A-208ENST00000566670 PBRM1Q86U86 1689 aa14.9□□□□□ -0.02
GRIN2A-208ENST00000566670 ABCA5Q8WWZ7 1642 aa14.87□□□□□ -0.03
GRIN2A-208ENST00000566670 WRNQ14191 1432 aaPredicted RBP eCLIP14.86□□□□□ -0.03
GRIN2A-208ENST00000566670 TRHP20396 242 aaPredicted RBP14.86□□□□□ -0.03
GRIN2A-208ENST00000566670 TOP2BQ02880 1626 aa14.82□□□□□ -0.04
GRIN2A-208ENST00000566670 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
GRIN2A-208ENST00000566670 GRIN2AQ12879 1464 aa14.78□□□□□ -0.04
GRIN2A-208ENST00000566670 ADAMTS12P58397 1594 aa14.75□□□□□ -0.05
GRIN2A-208ENST00000566670 FHAD1B1AJZ9 1412 aa14.74□□□□□ -0.05
GRIN2A-208ENST00000566670 NUP160Q12769 1436 aa14.73□□□□□ -0.05
GRIN2A-208ENST00000566670 ERICH3Q5RHP9 1530 aa14.72□□□□□ -0.05
GRIN2A-208ENST00000566670 CEP170Q5SW79 1584 aa14.72□□□□□ -0.05
GRIN2A-208ENST00000566670 ERCC6L2Q5T890 1561 aa14.69□□□□□ -0.06
GRIN2A-208ENST00000566670 SHROOM2Q13796 1616 aa14.66□□□□□ -0.06
GRIN2A-208ENST00000566670 JPH4Q96JJ6 628 aa14.62□□□□□ -0.07
GRIN2A-208ENST00000566670 PRG4Q92954 1404 aaPredicted RBP14.6□□□□□ -0.07
GRIN2A-208ENST00000566670 IGF1RP08069 1367 aa14.56□□□□□ -0.08
GRIN2A-208ENST00000566670 KIF27Q86VH2 1401 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms