RNA–Protein interactions for RNA: ENST00000566665.1

GRIN2A-207, Transcript of glutamate ionotropic receptor NMDA type subunit 2A, humanhuman

TSL 1 (best)

Gene GRIN2A, Length 1,322 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2A-207ENST00000566665 NISCHQ9Y2I1 1504 aa52.48■■■■■ 5.99
GRIN2A-207ENST00000566665 CCDC180Q9P1Z9 1646 aa46.56■■■■■ 5.04
GRIN2A-207ENST00000566665 ABCC9O60706 1549 aa45.92■■■■■ 4.94
GRIN2A-207ENST00000566665 DCAF8L2P0C7V8 631 aa44.05■■■■■ 4.64
GRIN2A-207ENST00000566665 RB1CC1Q8TDY2 1594 aa44■■■■■ 4.63
GRIN2A-207ENST00000566665 NACADO15069 1562 aa43.95■■■■■ 4.63
GRIN2A-207ENST00000566665 MYO15BQ96JP2 1530 aa43.67■■■■■ 4.58
GRIN2A-207ENST00000566665 ZCCHC6Q5VYS8 1495 aaKnown RBP43.64■■■■■ 4.58
GRIN2A-207ENST00000566665 DCAF1Q9Y4B6 1507 aa43.4■■■■■ 4.54
GRIN2A-207ENST00000566665 PABPN1Q86U42 306 aaKnown RBP eCLIP43.01■■■■■ 4.48
GRIN2A-207ENST00000566665 UNC13AQ9UPW8 1703 aa42.87■■■■■ 4.45
GRIN2A-207ENST00000566665 BICRAQ9NZM4 1560 aa42.73■■■■■ 4.43
GRIN2A-207ENST00000566665 DNAJC5BQ9UF47 199 aa42.53■■■■■ 4.4
GRIN2A-207ENST00000566665 SCRIBQ14160 1630 aa42.53■■■■■ 4.4
GRIN2A-207ENST00000566665 SHROOM4Q9ULL8 1493 aa42.23■■■■■ 4.35
GRIN2A-207ENST00000566665 EIF4G1Q04637 1599 aaKnown RBP41.6■■■■■ 4.25
GRIN2A-207ENST00000566665 CC2D2AQ9P2K1 1620 aa41.47■■■■■ 4.23
GRIN2A-207ENST00000566665 CECR2Q9BXF3 1484 aa41.3■■■■■ 4.2
GRIN2A-207ENST00000566665 SMARCA4P51532 1647 aa40.68■■■■■ 4.1
GRIN2A-207ENST00000566665 NCAPD3P42695 1498 aa40.66■■■■■ 4.1
GRIN2A-207ENST00000566665 BAZ1AQ9NRL2 1556 aaPredicted RBP40.63■■■■■ 4.09
GRIN2A-207ENST00000566665 ATAD2BQ9ULI0 1458 aa40.62■■■■■ 4.09
GRIN2A-207ENST00000566665 SMARCA2P51531 1590 aa40.48■■■■■ 4.07
GRIN2A-207ENST00000566665 MROH2BQ7Z745 1585 aa40.45■■■■■ 4.07
GRIN2A-207ENST00000566665 PEG3Q9GZU2 1588 aa40.32■■■■■ 4.05
GRIN2A-207ENST00000566665 HMGXB3Q12766 1538 aa40.31■■■■■ 4.04
GRIN2A-207ENST00000566665 BAZ1BQ9UIG0 1483 aaKnown RBP40.21■■■■■ 4.03
GRIN2A-207ENST00000566665 RSF1Q96T23 1441 aaPredicted RBP39.98■■■■□ 3.99
GRIN2A-207ENST00000566665 WIZO95785 1651 aa39.93■■■■□ 3.98
GRIN2A-207ENST00000566665 NESP48681 1621 aa39.7■■■■□ 3.95
GRIN2A-207ENST00000566665 ERCC6Q03468 1493 aa39.56■■■■□ 3.92
GRIN2A-207ENST00000566665 TOP2AP11388 1531 aaKnown RBP39.5■■■■□ 3.91
GRIN2A-207ENST00000566665 CADPSQ9ULU8 1353 aa39.48■■■■□ 3.91
GRIN2A-207ENST00000566665 LAMC3Q9Y6N6 1575 aa39.48■■■■□ 3.91
GRIN2A-207ENST00000566665 PDS5BQ9NTI5 1447 aa39.33■■■■□ 3.89
GRIN2A-207ENST00000566665 CUX2O14529 1486 aa39.23■■■■□ 3.87
GRIN2A-207ENST00000566665 CFTRP13569 1480 aa39.17■■■■□ 3.86
GRIN2A-207ENST00000566665 CCDC88BA6NC98 1476 aa39.14■■■■□ 3.86
GRIN2A-207ENST00000566665 KIF21AQ7Z4S6 1674 aa39.05■■■■□ 3.84
GRIN2A-207ENST00000566665 THOC2Q8NI27 1593 aaKnown RBP39.02■■■■□ 3.84
GRIN2A-207ENST00000566665 FANCD2Q9BXW9 1451 aa38.95■■■■□ 3.83
GRIN2A-207ENST00000566665 MRC2Q9UBG0 1479 aa38.88■■■■□ 3.81
GRIN2A-207ENST00000566665 CEP164Q9UPV0 1460 aa38.88■■■■□ 3.81
GRIN2A-207ENST00000566665 SUPT5HO00267 1087 aaKnown RBP38.87■■■■□ 3.81
GRIN2A-207ENST00000566665 WDR62O43379 1518 aa38.74■■■■□ 3.79
GRIN2A-207ENST00000566665 URB2Q14146 1524 aaKnown RBP38.58■■■■□ 3.77
GRIN2A-207ENST00000566665 PRDM2Q13029 1718 aa38.54■■■■□ 3.76
GRIN2A-207ENST00000566665 DNAJC5Q9H3Z4 198 aa38.42■■■■□ 3.74
GRIN2A-207ENST00000566665 TOPBP1Q92547 1522 aa38.3■■■■□ 3.72
GRIN2A-207ENST00000566665 ABCC8Q09428 1581 aa38.29■■■■□ 3.72
GRIN2A-207ENST00000566665 DNMBPQ6XZF7 1577 aa38.17■■■■□ 3.7
GRIN2A-207ENST00000566665 IFT140Q96RY7 1462 aa38.12■■■■□ 3.69
GRIN2A-207ENST00000566665 ZNF608Q9ULD9 1512 aaPredicted RBP37.98■■■■□ 3.67
GRIN2A-207ENST00000566665 POLA1P09884 1462 aaPredicted RBP37.97■■■■□ 3.67
GRIN2A-207ENST00000566665 CUX1P39880 1505 aa37.93■■■■□ 3.66
GRIN2A-207ENST00000566665 SOGA1O94964 1423 aa37.87■■■■□ 3.65
GRIN2A-207ENST00000566665 RAD54L2Q9Y4B4 1467 aa37.85■■■■□ 3.65
GRIN2A-207ENST00000566665 TARBP1Q13395 1621 aaKnown RBP37.85■■■■□ 3.65
GRIN2A-207ENST00000566665 FGD5Q6ZNL6 1462 aa37.84■■■■□ 3.65
GRIN2A-207ENST00000566665 AQRO60306 1485 aaKnown RBP eCLIP37.79■■■■□ 3.64
GRIN2A-207ENST00000566665 OSCARQ8IYS5 282 aa37.72■■■■□ 3.63
GRIN2A-207ENST00000566665 TDRD9Q8NDG6 1382 aaKnown RBP37.71■■■■□ 3.63
GRIN2A-207ENST00000566665 EIF4G3O43432 1585 aaKnown RBP37.68■■■■□ 3.62
GRIN2A-207ENST00000566665 WRNQ14191 1432 aaPredicted RBP eCLIP37.65■■■■□ 3.62
GRIN2A-207ENST00000566665 TOP2BQ02880 1626 aa37.5■■■■□ 3.59
GRIN2A-207ENST00000566665 SYNJ1O43426 1573 aa37.49■■■■□ 3.59
GRIN2A-207ENST00000566665 WDR97A6NE52 1622 aa37.49■■■■□ 3.59
GRIN2A-207ENST00000566665 ABCA10Q8WWZ4 1543 aa37.47■■■■□ 3.59
GRIN2A-207ENST00000566665 BIVM-ERCC5R4GMW8 1640 aa37.45■■■■□ 3.59
GRIN2A-207ENST00000566665 GRIN2BQ13224 1484 aa37.4■■■■□ 3.58
GRIN2A-207ENST00000566665 FBLN2P98095 1184 aa37.38■■■■□ 3.58
GRIN2A-207ENST00000566665 GAPVD1Q14C86 1478 aa37.38■■■■□ 3.57
GRIN2A-207ENST00000566665 SNAPC4Q5SXM2 1469 aa37.35■■■■□ 3.57
GRIN2A-207ENST00000566665 MAGI1Q96QZ7 1491 aaPredicted RBP37.29■■■■□ 3.56
GRIN2A-207ENST00000566665 CHMP7Q8WUX9 453 aaPredicted RBP37.27■■■■□ 3.56
GRIN2A-207ENST00000566665 ABCA5Q8WWZ7 1642 aa37.25■■■■□ 3.55
GRIN2A-207ENST00000566665 CHD1O14646 1710 aa37.18■■■■□ 3.54
GRIN2A-207ENST00000566665 SYNJ2O15056 1496 aa37.16■■■■□ 3.54
GRIN2A-207ENST00000566665 PBRM1Q86U86 1689 aa37.11■■■■□ 3.53
GRIN2A-207ENST00000566665 TRIM41Q8WV44 630 aa37.01■■■■□ 3.52
GRIN2A-207ENST00000566665 ERICH3Q5RHP9 1530 aa36.99■■■■□ 3.51
GRIN2A-207ENST00000566665 FHAD1B1AJZ9 1412 aa36.96■■■■□ 3.51
GRIN2A-207ENST00000566665 ARHGEF11O15085 1522 aa36.95■■■■□ 3.51
GRIN2A-207ENST00000566665 RIMBP3CA6NJZ7 1639 aa36.93■■■■□ 3.5
GRIN2A-207ENST00000566665 RIMBP3BA6NNM3 1639 aa36.93■■■■□ 3.5
GRIN2A-207ENST00000566665 RIMBP3Q9UFD9 1639 aa36.93■■■■□ 3.5
GRIN2A-207ENST00000566665 CLASP1Q7Z460 1538 aa36.91■■■■□ 3.5
GRIN2A-207ENST00000566665 ADAMTS12P58397 1594 aa36.9■■■■□ 3.5
GRIN2A-207ENST00000566665 GRIN2AQ12879 1464 aa36.9■■■■□ 3.5
GRIN2A-207ENST00000566665 KIF27Q86VH2 1401 aa36.88■■■■□ 3.5
GRIN2A-207ENST00000566665 IGF1RP08069 1367 aa36.86■■■■□ 3.49
GRIN2A-207ENST00000566665 NUP160Q12769 1436 aa36.78■■■■□ 3.48
GRIN2A-207ENST00000566665 CYB5RLQ6IPT4 315 aa36.77■■■■□ 3.48
GRIN2A-207ENST00000566665 CEP170Q5SW79 1584 aa36.69■■■■□ 3.46
GRIN2A-207ENST00000566665 ARAP1Q96P48 1450 aa36.67■■■■□ 3.46
GRIN2A-207ENST00000566665 CARMIL1Q5VZK9 1371 aa36.59■■■■□ 3.45
GRIN2A-207ENST00000566665 RUSC2Q8N2Y8 1516 aa36.54■■■■□ 3.44
GRIN2A-207ENST00000566665 JPH4Q96JJ6 628 aa36.52■■■■□ 3.44
GRIN2A-207ENST00000566665 CUL7Q14999 1698 aa36.51■■■■□ 3.44
GRIN2A-207ENST00000566665 SHROOM2Q13796 1616 aa36.42■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms