RNA–Protein interactions for RNA: ENST00000566658.1

SNAPC5-207, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene SNAPC5, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-207ENST00000566658 NISCHQ9Y2I1 1504 aa30.48■■■□□ 2.47
SNAPC5-207ENST00000566658 CCDC180Q9P1Z9 1646 aa27.24■■□□□ 1.95
SNAPC5-207ENST00000566658 ABCC9O60706 1549 aa26.93■■□□□ 1.9
SNAPC5-207ENST00000566658 RB1CC1Q8TDY2 1594 aa25.73■■□□□ 1.71
SNAPC5-207ENST00000566658 NACADO15069 1562 aa25.64■■□□□ 1.69
SNAPC5-207ENST00000566658 DCAF8L2P0C7V8 631 aa25.44■■□□□ 1.66
SNAPC5-207ENST00000566658 MYO15BQ96JP2 1530 aa25.41■■□□□ 1.66
SNAPC5-207ENST00000566658 ZCCHC6Q5VYS8 1495 aaKnown RBP25.34■■□□□ 1.65
SNAPC5-207ENST00000566658 UNC13AQ9UPW8 1703 aa25.27■■□□□ 1.64
SNAPC5-207ENST00000566658 DCAF1Q9Y4B6 1507 aa25.2■■□□□ 1.62
SNAPC5-207ENST00000566658 BICRAQ9NZM4 1560 aa25.09■■□□□ 1.61
SNAPC5-207ENST00000566658 PABPN1Q86U42 306 aaKnown RBP eCLIP25.08■■□□□ 1.61
SNAPC5-207ENST00000566658 DNAJC5BQ9UF47 199 aa25.06■■□□□ 1.6
SNAPC5-207ENST00000566658 SCRIBQ14160 1630 aa24.83■■□□□ 1.57
SNAPC5-207ENST00000566658 SHROOM4Q9ULL8 1493 aa24.68■■□□□ 1.54
SNAPC5-207ENST00000566658 EIF4G1Q04637 1599 aaKnown RBP24.39■■□□□ 1.5
SNAPC5-207ENST00000566658 CC2D2AQ9P2K1 1620 aa24.37■■□□□ 1.49
SNAPC5-207ENST00000566658 CECR2Q9BXF3 1484 aa24.21■■□□□ 1.47
SNAPC5-207ENST00000566658 SMARCA4P51532 1647 aa23.73■■□□□ 1.39
SNAPC5-207ENST00000566658 NCAPD3P42695 1498 aa23.68■■□□□ 1.38
SNAPC5-207ENST00000566658 ATAD2BQ9ULI0 1458 aa23.67■■□□□ 1.38
SNAPC5-207ENST00000566658 BAZ1AQ9NRL2 1556 aaPredicted RBP23.61■■□□□ 1.37
SNAPC5-207ENST00000566658 SMARCA2P51531 1590 aa23.57■■□□□ 1.36
SNAPC5-207ENST00000566658 HMGXB3Q12766 1538 aa23.55■■□□□ 1.36
SNAPC5-207ENST00000566658 MROH2BQ7Z745 1585 aa23.52■■□□□ 1.36
SNAPC5-207ENST00000566658 PEG3Q9GZU2 1588 aa23.52■■□□□ 1.36
SNAPC5-207ENST00000566658 BAZ1BQ9UIG0 1483 aaKnown RBP23.41■■□□□ 1.34
SNAPC5-207ENST00000566658 NESP48681 1621 aa23.26■■□□□ 1.31
SNAPC5-207ENST00000566658 WIZO95785 1651 aa23.25■■□□□ 1.31
SNAPC5-207ENST00000566658 ERCC6Q03468 1493 aa23.16■■□□□ 1.3
SNAPC5-207ENST00000566658 RSF1Q96T23 1441 aaPredicted RBP23.11■■□□□ 1.29
SNAPC5-207ENST00000566658 LAMC3Q9Y6N6 1575 aa23.1■■□□□ 1.29
SNAPC5-207ENST00000566658 CUX2O14529 1486 aa23.06■■□□□ 1.28
SNAPC5-207ENST00000566658 THOC2Q8NI27 1593 aaKnown RBP22.99■■□□□ 1.27
SNAPC5-207ENST00000566658 KIF21AQ7Z4S6 1674 aa22.98■■□□□ 1.27
SNAPC5-207ENST00000566658 TOP2AP11388 1531 aaKnown RBP22.95■■□□□ 1.26
SNAPC5-207ENST00000566658 CADPSQ9ULU8 1353 aa22.94■■□□□ 1.26
SNAPC5-207ENST00000566658 PDS5BQ9NTI5 1447 aa22.89■■□□□ 1.25
SNAPC5-207ENST00000566658 CFTRP13569 1480 aa22.78■■□□□ 1.24
SNAPC5-207ENST00000566658 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
SNAPC5-207ENST00000566658 DNAJC5Q9H3Z4 198 aa22.71■■□□□ 1.23
SNAPC5-207ENST00000566658 WDR62O43379 1518 aa22.71■■□□□ 1.23
SNAPC5-207ENST00000566658 FANCD2Q9BXW9 1451 aa22.7■■□□□ 1.22
SNAPC5-207ENST00000566658 CCDC88BA6NC98 1476 aa22.68■■□□□ 1.22
SNAPC5-207ENST00000566658 CEP164Q9UPV0 1460 aa22.68■■□□□ 1.22
SNAPC5-207ENST00000566658 PRDM2Q13029 1718 aa22.61■■□□□ 1.21
SNAPC5-207ENST00000566658 URB2Q14146 1524 aaKnown RBP22.55■■□□□ 1.2
SNAPC5-207ENST00000566658 TOPBP1Q92547 1522 aa22.32■■□□□ 1.16
SNAPC5-207ENST00000566658 DNMBPQ6XZF7 1577 aa22.27■■□□□ 1.16
SNAPC5-207ENST00000566658 ZNF608Q9ULD9 1512 aaPredicted RBP22.22■■□□□ 1.15
SNAPC5-207ENST00000566658 IFT140Q96RY7 1462 aa22.22■■□□□ 1.15
SNAPC5-207ENST00000566658 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
SNAPC5-207ENST00000566658 SUPT5HO00267 1087 aaKnown RBP22.19■■□□□ 1.14
SNAPC5-207ENST00000566658 TARBP1Q13395 1621 aaKnown RBP22.15■■□□□ 1.14
SNAPC5-207ENST00000566658 POLA1P09884 1462 aaPredicted RBP22.12■■□□□ 1.13
SNAPC5-207ENST00000566658 EIF4G3O43432 1585 aaKnown RBP22.12■■□□□ 1.13
SNAPC5-207ENST00000566658 CUX1P39880 1505 aa22.07■■□□□ 1.12
SNAPC5-207ENST00000566658 RAD54L2Q9Y4B4 1467 aa22.03■■□□□ 1.12
SNAPC5-207ENST00000566658 AQRO60306 1485 aaKnown RBP eCLIP22.02■■□□□ 1.12
SNAPC5-207ENST00000566658 FGD5Q6ZNL6 1462 aa22.02■■□□□ 1.12
SNAPC5-207ENST00000566658 OSCARQ8IYS5 282 aa21.99■■□□□ 1.11
SNAPC5-207ENST00000566658 SOGA1O94964 1423 aa21.97■■□□□ 1.11
SNAPC5-207ENST00000566658 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
SNAPC5-207ENST00000566658 TDRD9Q8NDG6 1382 aaKnown RBP21.9■■□□□ 1.1
SNAPC5-207ENST00000566658 CHD1O14646 1710 aa21.9■■□□□ 1.1
SNAPC5-207ENST00000566658 BIVM-ERCC5R4GMW8 1640 aa21.8■■□□□ 1.08
SNAPC5-207ENST00000566658 SYNJ1O43426 1573 aa21.8■■□□□ 1.08
SNAPC5-207ENST00000566658 SNAPC4Q5SXM2 1469 aa21.8■■□□□ 1.08
SNAPC5-207ENST00000566658 RIMBP3CA6NJZ7 1639 aa21.8■■□□□ 1.08
SNAPC5-207ENST00000566658 RIMBP3BA6NNM3 1639 aa21.8■■□□□ 1.08
SNAPC5-207ENST00000566658 RIMBP3Q9UFD9 1639 aa21.8■■□□□ 1.08
SNAPC5-207ENST00000566658 TRIM41Q8WV44 630 aa21.79■■□□□ 1.08
SNAPC5-207ENST00000566658 TOP2BQ02880 1626 aa21.78■■□□□ 1.08
SNAPC5-207ENST00000566658 ABCA10Q8WWZ4 1543 aa21.78■■□□□ 1.08
SNAPC5-207ENST00000566658 ABCA5Q8WWZ7 1642 aa21.77■■□□□ 1.07
SNAPC5-207ENST00000566658 GRIN2BQ13224 1484 aa21.76■■□□□ 1.07
SNAPC5-207ENST00000566658 PBRM1Q86U86 1689 aa21.75■■□□□ 1.07
SNAPC5-207ENST00000566658 WRNQ14191 1432 aaPredicted RBP eCLIP21.74■■□□□ 1.07
SNAPC5-207ENST00000566658 ARHGEF11O15085 1522 aa21.74■■□□□ 1.07
SNAPC5-207ENST00000566658 MAGI1Q96QZ7 1491 aaPredicted RBP21.73■■□□□ 1.07
SNAPC5-207ENST00000566658 GAPVD1Q14C86 1478 aa21.72■■□□□ 1.07
SNAPC5-207ENST00000566658 FBLN2P98095 1184 aa21.7■■□□□ 1.06
SNAPC5-207ENST00000566658 CLASP1Q7Z460 1538 aa21.66■■□□□ 1.06
SNAPC5-207ENST00000566658 SYNJ2O15056 1496 aa21.66■■□□□ 1.06
SNAPC5-207ENST00000566658 CHMP7Q8WUX9 453 aaPredicted RBP21.6■■□□□ 1.05
SNAPC5-207ENST00000566658 ARAP1Q96P48 1450 aa21.57■■□□□ 1.04
SNAPC5-207ENST00000566658 ADAMTS12P58397 1594 aa21.57■■□□□ 1.04
SNAPC5-207ENST00000566658 GRIN2AQ12879 1464 aa21.51■■□□□ 1.03
SNAPC5-207ENST00000566658 ERICH3Q5RHP9 1530 aa21.5■■□□□ 1.03
SNAPC5-207ENST00000566658 CYB5RLQ6IPT4 315 aa21.47■■□□□ 1.03
SNAPC5-207ENST00000566658 CEP170Q5SW79 1584 aa21.46■■□□□ 1.03
SNAPC5-207ENST00000566658 FHAD1B1AJZ9 1412 aa21.46■■□□□ 1.03
SNAPC5-207ENST00000566658 NUP160Q12769 1436 aa21.44■■□□□ 1.02
SNAPC5-207ENST00000566658 ERCC6L2Q5T890 1561 aa21.37■■□□□ 1.01
SNAPC5-207ENST00000566658 SHROOM2Q13796 1616 aa21.35■■□□□ 1.01
SNAPC5-207ENST00000566658 IGF1RP08069 1367 aa21.29■■□□□ 1
SNAPC5-207ENST00000566658 KIF27Q86VH2 1401 aa21.29■■□□□ 1
SNAPC5-207ENST00000566658 RUSC2Q8N2Y8 1516 aa21.27■■□□□ 1
SNAPC5-207ENST00000566658 CUL7Q14999 1698 aa21.24■□□□□ 0.99
SNAPC5-207ENST00000566658 PRG4Q92954 1404 aaPredicted RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms