RNA–Protein interactions for RNA: ENST00000566655.1

VAC14-208, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 5

Gene VAC14, Length 1,391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-208ENST00000566655 NISCHQ9Y2I1 1504 aa36.38■■■■□ 3.41
VAC14-208ENST00000566655 CCDC180Q9P1Z9 1646 aa31.68■■■□□ 2.66
VAC14-208ENST00000566655 ZCCHC6Q5VYS8 1495 aaKnown RBP30.55■■■□□ 2.48
VAC14-208ENST00000566655 ABCC9O60706 1549 aa30.11■■■□□ 2.41
VAC14-208ENST00000566655 DCAF1Q9Y4B6 1507 aa30.11■■■□□ 2.41
VAC14-208ENST00000566655 DCAF8L2P0C7V8 631 aa29.92■■■□□ 2.38
VAC14-208ENST00000566655 MYO15BQ96JP2 1530 aa29.81■■■□□ 2.36
VAC14-208ENST00000566655 NACADO15069 1562 aa29.6■■■□□ 2.33
VAC14-208ENST00000566655 SHROOM4Q9ULL8 1493 aa29.47■■■□□ 2.31
VAC14-208ENST00000566655 RB1CC1Q8TDY2 1594 aa29.33■■■□□ 2.29
VAC14-208ENST00000566655 SCRIBQ14160 1630 aa29.11■■■□□ 2.25
VAC14-208ENST00000566655 UNC13AQ9UPW8 1703 aa28.65■■■□□ 2.18
VAC14-208ENST00000566655 BICRAQ9NZM4 1560 aa28.54■■■□□ 2.16
VAC14-208ENST00000566655 PABPN1Q86U42 306 aaKnown RBP eCLIP28.39■■■□□ 2.14
VAC14-208ENST00000566655 CECR2Q9BXF3 1484 aa28.29■■■□□ 2.12
VAC14-208ENST00000566655 SUPT5HO00267 1087 aaKnown RBP28.28■■■□□ 2.12
VAC14-208ENST00000566655 RSF1Q96T23 1441 aaPredicted RBP28.2■■■□□ 2.1
VAC14-208ENST00000566655 MROH2BQ7Z745 1585 aa28.1■■■□□ 2.09
VAC14-208ENST00000566655 BAZ1AQ9NRL2 1556 aaPredicted RBP28.04■■■□□ 2.08
VAC14-208ENST00000566655 SMARCA4P51532 1647 aa27.93■■■□□ 2.06
VAC14-208ENST00000566655 WIZO95785 1651 aa27.78■■■□□ 2.04
VAC14-208ENST00000566655 PEG3Q9GZU2 1588 aa27.67■■■□□ 2.02
VAC14-208ENST00000566655 EIF4G1Q04637 1599 aaKnown RBP27.63■■■□□ 2.01
VAC14-208ENST00000566655 ATAD2BQ9ULI0 1458 aa27.59■■■□□ 2.01
VAC14-208ENST00000566655 TOP2AP11388 1531 aaKnown RBP27.54■■■□□ 2
VAC14-208ENST00000566655 SMARCA2P51531 1590 aa27.48■■□□□ 1.99
VAC14-208ENST00000566655 NCAPD3P42695 1498 aa27.39■■□□□ 1.98
VAC14-208ENST00000566655 BAZ1BQ9UIG0 1483 aaKnown RBP27.34■■□□□ 1.97
VAC14-208ENST00000566655 CCDC88BA6NC98 1476 aa27.28■■□□□ 1.96
VAC14-208ENST00000566655 HMGXB3Q12766 1538 aa27.27■■□□□ 1.96
VAC14-208ENST00000566655 CC2D2AQ9P2K1 1620 aa27.23■■□□□ 1.95
VAC14-208ENST00000566655 CHIC1Q5VXU3 224 aa27.11■■□□□ 1.93
VAC14-208ENST00000566655 DNAJC5BQ9UF47 199 aa26.8■■□□□ 1.88
VAC14-208ENST00000566655 CFTRP13569 1480 aa26.72■■□□□ 1.87
VAC14-208ENST00000566655 CADPSQ9ULU8 1353 aa26.65■■□□□ 1.86
VAC14-208ENST00000566655 TRIM41Q8WV44 630 aa26.61■■□□□ 1.85
VAC14-208ENST00000566655 ABCC8Q09428 1581 aa26.6■■□□□ 1.85
VAC14-208ENST00000566655 WRNQ14191 1432 aaPredicted RBP eCLIP26.47■■□□□ 1.83
VAC14-208ENST00000566655 NESP48681 1621 aa26.42■■□□□ 1.82
VAC14-208ENST00000566655 SYNJ1O43426 1573 aa26.38■■□□□ 1.81
VAC14-208ENST00000566655 LAMC3Q9Y6N6 1575 aa26.38■■□□□ 1.81
VAC14-208ENST00000566655 PRDM2Q13029 1718 aa26.37■■□□□ 1.81
VAC14-208ENST00000566655 FANCD2Q9BXW9 1451 aa26.31■■□□□ 1.8
VAC14-208ENST00000566655 CUX1P39880 1505 aa26.27■■□□□ 1.8
VAC14-208ENST00000566655 TOP2BQ02880 1626 aa26.26■■□□□ 1.8
VAC14-208ENST00000566655 BIVM-ERCC5R4GMW8 1640 aa26.23■■□□□ 1.79
VAC14-208ENST00000566655 PDS5BQ9NTI5 1447 aa26.19■■□□□ 1.78
VAC14-208ENST00000566655 SOGA1O94964 1423 aa26.14■■□□□ 1.78
VAC14-208ENST00000566655 CEP164Q9UPV0 1460 aa26.12■■□□□ 1.77
VAC14-208ENST00000566655 FAM9AQ8IZU1 332 aaPredicted RBP26.09■■□□□ 1.77
VAC14-208ENST00000566655 RUSC2Q8N2Y8 1516 aa26.06■■□□□ 1.76
VAC14-208ENST00000566655 LOC105371045A0A1W2PR82 267 aa26.04■■□□□ 1.76
VAC14-208ENST00000566655 URB2Q14146 1524 aaKnown RBP26.03■■□□□ 1.76
VAC14-208ENST00000566655 DNMBPQ6XZF7 1577 aa26.03■■□□□ 1.76
VAC14-208ENST00000566655 EEA1Q15075 1411 aa26.03■■□□□ 1.76
VAC14-208ENST00000566655 TOPBP1Q92547 1522 aa26.03■■□□□ 1.76
VAC14-208ENST00000566655 KIF21AQ7Z4S6 1674 aa26■■□□□ 1.75
VAC14-208ENST00000566655 FGD5Q6ZNL6 1462 aa25.98■■□□□ 1.75
VAC14-208ENST00000566655 CSRNP3Q8WYN3 585 aa25.92■■□□□ 1.74
VAC14-208ENST00000566655 POLA1P09884 1462 aaPredicted RBP25.9■■□□□ 1.74
VAC14-208ENST00000566655 MRC2Q9UBG0 1479 aa25.88■■□□□ 1.73
VAC14-208ENST00000566655 KIF27Q86VH2 1401 aa25.81■■□□□ 1.72
VAC14-208ENST00000566655 RAD54L2Q9Y4B4 1467 aa25.81■■□□□ 1.72
VAC14-208ENST00000566655 ABCA10Q8WWZ4 1543 aa25.78■■□□□ 1.72
VAC14-208ENST00000566655 CUX2O14529 1486 aa25.77■■□□□ 1.72
VAC14-208ENST00000566655 WDR62O43379 1518 aa25.76■■□□□ 1.71
VAC14-208ENST00000566655 ERCC6Q03468 1493 aa25.76■■□□□ 1.71
VAC14-208ENST00000566655 THOC2Q8NI27 1593 aaKnown RBP25.7■■□□□ 1.71
VAC14-208ENST00000566655 IGF1RP08069 1367 aa25.68■■□□□ 1.7
VAC14-208ENST00000566655 PRXQ9BXM0 1461 aa25.68■■□□□ 1.7
VAC14-208ENST00000566655 EHMT2Q96KQ7 1210 aa25.68■■□□□ 1.7
VAC14-208ENST00000566655 KIF21BO75037 1637 aa25.68■■□□□ 1.7
VAC14-208ENST00000566655 WDR97A6NE52 1622 aa25.65■■□□□ 1.7
VAC14-208ENST00000566655 GOLGA3Q08378 1498 aa25.64■■□□□ 1.7
VAC14-208ENST00000566655 TARBP1Q13395 1621 aaKnown RBP25.64■■□□□ 1.69
VAC14-208ENST00000566655 RAPGEF2Q9Y4G8 1499 aa25.59■■□□□ 1.69
VAC14-208ENST00000566655 TNIKQ9UKE5 1360 aa25.59■■□□□ 1.69
VAC14-208ENST00000566655 TDRD9Q8NDG6 1382 aaKnown RBP25.56■■□□□ 1.68
VAC14-208ENST00000566655 IFT140Q96RY7 1462 aa25.55■■□□□ 1.68
VAC14-208ENST00000566655 ERICH3Q5RHP9 1530 aa25.55■■□□□ 1.68
VAC14-208ENST00000566655 ABCA5Q8WWZ7 1642 aa25.54■■□□□ 1.68
VAC14-208ENST00000566655 GAPVD1Q14C86 1478 aa25.5■■□□□ 1.67
VAC14-208ENST00000566655 CARMIL1Q5VZK9 1371 aa25.49■■□□□ 1.67
VAC14-208ENST00000566655 UBTFP17480 764 aaKnown RBP25.46■■□□□ 1.67
VAC14-208ENST00000566655 ZNF608Q9ULD9 1512 aaPredicted RBP25.44■■□□□ 1.66
VAC14-208ENST00000566655 AQRO60306 1485 aaKnown RBP eCLIP25.42■■□□□ 1.66
VAC14-208ENST00000566655 CEP162Q5TB80 1403 aa25.4■■□□□ 1.66
VAC14-208ENST00000566655 CUL7Q14999 1698 aa25.35■■□□□ 1.65
VAC14-208ENST00000566655 GRIN2BQ13224 1484 aa25.32■■□□□ 1.64
VAC14-208ENST00000566655 EIF4G3O43432 1585 aaKnown RBP25.27■■□□□ 1.64
VAC14-208ENST00000566655 PBRM1Q86U86 1689 aa25.25■■□□□ 1.63
VAC14-208ENST00000566655 FHAD1B1AJZ9 1412 aa25.25■■□□□ 1.63
VAC14-208ENST00000566655 CLIP1P30622 1438 aa25.22■■□□□ 1.63
VAC14-208ENST00000566655 ADAMTS12P58397 1594 aa25.21■■□□□ 1.63
VAC14-208ENST00000566655 SNAPC4Q5SXM2 1469 aa25.17■■□□□ 1.62
VAC14-208ENST00000566655 MAGI1Q96QZ7 1491 aaPredicted RBP25.12■■□□□ 1.61
VAC14-208ENST00000566655 ARHGAP35Q9NRY4 1499 aa25.07■■□□□ 1.6
VAC14-208ENST00000566655 ARAP1Q96P48 1450 aa25.06■■□□□ 1.6
VAC14-208ENST00000566655 RANGAP1P46060 587 aaPredicted RBP25.05■■□□□ 1.6
VAC14-208ENST00000566655 SYNJ2O15056 1496 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms