RNA–Protein interactions for RNA: ENST00000566599.1

RSRP1-214, Transcript of arginine and serine rich protein 1, humanhuman

TSL 1 (best)

Gene RSRP1, Length 945 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSRP1-214ENST00000566599 NISCHQ9Y2I1 1504 aa53.43■■■■■ 6.14
RSRP1-214ENST00000566599 CCDC180Q9P1Z9 1646 aa47.86■■■■■ 5.25
RSRP1-214ENST00000566599 ABCC9O60706 1549 aa47.56■■■■■ 5.2
RSRP1-214ENST00000566599 RB1CC1Q8TDY2 1594 aa45.39■■■■■ 4.86
RSRP1-214ENST00000566599 DCAF8L2P0C7V8 631 aa45.19■■■■■ 4.82
RSRP1-214ENST00000566599 NACADO15069 1562 aa45.09■■■■■ 4.81
RSRP1-214ENST00000566599 UNC13AQ9UPW8 1703 aa44.53■■■■■ 4.72
RSRP1-214ENST00000566599 MYO15BQ96JP2 1530 aa44.45■■■■■ 4.71
RSRP1-214ENST00000566599 ZCCHC6Q5VYS8 1495 aaKnown RBP44.34■■■■■ 4.69
RSRP1-214ENST00000566599 PABPN1Q86U42 306 aaKnown RBP eCLIP44.34■■■■■ 4.69
RSRP1-214ENST00000566599 DNAJC5BQ9UF47 199 aa44.16■■■■■ 4.66
RSRP1-214ENST00000566599 DCAF1Q9Y4B6 1507 aa44.05■■■■■ 4.64
RSRP1-214ENST00000566599 BICRAQ9NZM4 1560 aa44■■■■■ 4.63
RSRP1-214ENST00000566599 SCRIBQ14160 1630 aa43.76■■■■■ 4.6
RSRP1-214ENST00000566599 SHROOM4Q9ULL8 1493 aa43.32■■■■■ 4.52
RSRP1-214ENST00000566599 CC2D2AQ9P2K1 1620 aa42.98■■■■■ 4.47
RSRP1-214ENST00000566599 EIF4G1Q04637 1599 aaKnown RBP42.93■■■■■ 4.46
RSRP1-214ENST00000566599 CECR2Q9BXF3 1484 aa42.75■■■■■ 4.43
RSRP1-214ENST00000566599 SMARCA4P51532 1647 aa41.69■■■■■ 4.26
RSRP1-214ENST00000566599 NCAPD3P42695 1498 aa41.54■■■■■ 4.24
RSRP1-214ENST00000566599 ATAD2BQ9ULI0 1458 aa41.53■■■■■ 4.24
RSRP1-214ENST00000566599 SMARCA2P51531 1590 aa41.49■■■■■ 4.23
RSRP1-214ENST00000566599 BAZ1AQ9NRL2 1556 aaPredicted RBP41.49■■■■■ 4.23
RSRP1-214ENST00000566599 HMGXB3Q12766 1538 aa41.34■■■■■ 4.21
RSRP1-214ENST00000566599 BAZ1BQ9UIG0 1483 aaKnown RBP41.25■■■■■ 4.19
RSRP1-214ENST00000566599 MROH2BQ7Z745 1585 aa41.22■■■■■ 4.19
RSRP1-214ENST00000566599 PEG3Q9GZU2 1588 aa41.14■■■■■ 4.18
RSRP1-214ENST00000566599 ERCC6Q03468 1493 aa41.08■■■■■ 4.17
RSRP1-214ENST00000566599 NESP48681 1621 aa40.95■■■■■ 4.15
RSRP1-214ENST00000566599 WIZO95785 1651 aa40.86■■■■■ 4.13
RSRP1-214ENST00000566599 CUX2O14529 1486 aa40.72■■■■■ 4.11
RSRP1-214ENST00000566599 LAMC3Q9Y6N6 1575 aa40.67■■■■■ 4.1
RSRP1-214ENST00000566599 KIF21AQ7Z4S6 1674 aa40.55■■■■■ 4.08
RSRP1-214ENST00000566599 THOC2Q8NI27 1593 aaKnown RBP40.44■■■■■ 4.06
RSRP1-214ENST00000566599 RSF1Q96T23 1441 aaPredicted RBP40.44■■■■■ 4.06
RSRP1-214ENST00000566599 PDS5BQ9NTI5 1447 aa40.4■■■■■ 4.06
RSRP1-214ENST00000566599 CADPSQ9ULU8 1353 aa40.35■■■■■ 4.05
RSRP1-214ENST00000566599 TOP2AP11388 1531 aaKnown RBP40.26■■■■■ 4.03
RSRP1-214ENST00000566599 DNAJC5Q9H3Z4 198 aa40.25■■■■■ 4.03
RSRP1-214ENST00000566599 MRC2Q9UBG0 1479 aa40.05■■■■■ 4
RSRP1-214ENST00000566599 CEP164Q9UPV0 1460 aa40■■■■□ 3.99
RSRP1-214ENST00000566599 FANCD2Q9BXW9 1451 aa39.97■■■■□ 3.99
RSRP1-214ENST00000566599 CFTRP13569 1480 aa39.95■■■■□ 3.99
RSRP1-214ENST00000566599 WDR62O43379 1518 aa39.92■■■■□ 3.98
RSRP1-214ENST00000566599 PRDM2Q13029 1718 aa39.85■■■■□ 3.97
RSRP1-214ENST00000566599 CCDC88BA6NC98 1476 aa39.79■■■■□ 3.96
RSRP1-214ENST00000566599 URB2Q14146 1524 aaKnown RBP39.6■■■■□ 3.93
RSRP1-214ENST00000566599 TOPBP1Q92547 1522 aa39.25■■■■□ 3.87
RSRP1-214ENST00000566599 DNMBPQ6XZF7 1577 aa39.16■■■■□ 3.86
RSRP1-214ENST00000566599 SUPT5HO00267 1087 aaKnown RBP39.14■■■■□ 3.86
RSRP1-214ENST00000566599 ABCC8Q09428 1581 aa39.13■■■■□ 3.85
RSRP1-214ENST00000566599 IFT140Q96RY7 1462 aa39.13■■■■□ 3.85
RSRP1-214ENST00000566599 ZNF608Q9ULD9 1512 aaPredicted RBP39.08■■■■□ 3.85
RSRP1-214ENST00000566599 OSCARQ8IYS5 282 aa38.96■■■■□ 3.83
RSRP1-214ENST00000566599 EIF4G3O43432 1585 aaKnown RBP38.95■■■■□ 3.83
RSRP1-214ENST00000566599 TRIM41Q8WV44 630 aa38.89■■■■□ 3.82
RSRP1-214ENST00000566599 TARBP1Q13395 1621 aaKnown RBP38.88■■■■□ 3.81
RSRP1-214ENST00000566599 POLA1P09884 1462 aaPredicted RBP38.86■■■■□ 3.81
RSRP1-214ENST00000566599 AQRO60306 1485 aaKnown RBP eCLIP38.79■■■■□ 3.8
RSRP1-214ENST00000566599 RAD54L2Q9Y4B4 1467 aa38.77■■■■□ 3.8
RSRP1-214ENST00000566599 CUX1P39880 1505 aa38.72■■■■□ 3.79
RSRP1-214ENST00000566599 FGD5Q6ZNL6 1462 aa38.71■■■■□ 3.79
RSRP1-214ENST00000566599 SOGA1O94964 1423 aa38.7■■■■□ 3.79
RSRP1-214ENST00000566599 CHD1O14646 1710 aa38.69■■■■□ 3.78
RSRP1-214ENST00000566599 TDRD9Q8NDG6 1382 aaKnown RBP38.6■■■■□ 3.77
RSRP1-214ENST00000566599 FBLN2P98095 1184 aa38.58■■■■□ 3.77
RSRP1-214ENST00000566599 RIMBP3CA6NJZ7 1639 aa38.52■■■■□ 3.76
RSRP1-214ENST00000566599 RIMBP3BA6NNM3 1639 aa38.52■■■■□ 3.76
RSRP1-214ENST00000566599 RIMBP3Q9UFD9 1639 aa38.52■■■■□ 3.76
RSRP1-214ENST00000566599 WDR97A6NE52 1622 aa38.45■■■■□ 3.75
RSRP1-214ENST00000566599 SNAPC4Q5SXM2 1469 aa38.42■■■■□ 3.74
RSRP1-214ENST00000566599 PBRM1Q86U86 1689 aa38.37■■■■□ 3.73
RSRP1-214ENST00000566599 ARHGEF11O15085 1522 aa38.37■■■■□ 3.73
RSRP1-214ENST00000566599 GRIN2BQ13224 1484 aa38.31■■■■□ 3.72
RSRP1-214ENST00000566599 CHMP7Q8WUX9 453 aaPredicted RBP38.26■■■■□ 3.72
RSRP1-214ENST00000566599 MAGI1Q96QZ7 1491 aaPredicted RBP38.26■■■■□ 3.72
RSRP1-214ENST00000566599 GAPVD1Q14C86 1478 aa38.25■■■■□ 3.71
RSRP1-214ENST00000566599 BIVM-ERCC5R4GMW8 1640 aa38.23■■■■□ 3.71
RSRP1-214ENST00000566599 ABCA10Q8WWZ4 1543 aa38.22■■■■□ 3.71
RSRP1-214ENST00000566599 SYNJ1O43426 1573 aa38.21■■■■□ 3.71
RSRP1-214ENST00000566599 WRNQ14191 1432 aaPredicted RBP eCLIP38.21■■■■□ 3.71
RSRP1-214ENST00000566599 TOP2BQ02880 1626 aa38.2■■■■□ 3.71
RSRP1-214ENST00000566599 ABCA5Q8WWZ7 1642 aa38.2■■■■□ 3.7
RSRP1-214ENST00000566599 SYNJ2O15056 1496 aa38.14■■■■□ 3.7
RSRP1-214ENST00000566599 CYB5RLQ6IPT4 315 aa38.1■■■■□ 3.69
RSRP1-214ENST00000566599 CLASP1Q7Z460 1538 aa38.06■■■■□ 3.68
RSRP1-214ENST00000566599 ARAP1Q96P48 1450 aa38■■■■□ 3.67
RSRP1-214ENST00000566599 ADAMTS12P58397 1594 aa37.9■■■■□ 3.66
RSRP1-214ENST00000566599 GRIN2AQ12879 1464 aa37.84■■■■□ 3.65
RSRP1-214ENST00000566599 ERICH3Q5RHP9 1530 aa37.77■■■■□ 3.64
RSRP1-214ENST00000566599 FHAD1B1AJZ9 1412 aa37.73■■■■□ 3.63
RSRP1-214ENST00000566599 CEP170Q5SW79 1584 aa37.72■■■■□ 3.63
RSRP1-214ENST00000566599 TRHP20396 242 aaPredicted RBP37.66■■■■□ 3.62
RSRP1-214ENST00000566599 NUP160Q12769 1436 aa37.61■■■■□ 3.61
RSRP1-214ENST00000566599 ERCC6L2Q5T890 1561 aa37.57■■■■□ 3.6
RSRP1-214ENST00000566599 SHROOM2Q13796 1616 aa37.48■■■■□ 3.59
RSRP1-214ENST00000566599 KIF27Q86VH2 1401 aa37.44■■■■□ 3.58
RSRP1-214ENST00000566599 CUL7Q14999 1698 aa37.38■■■■□ 3.57
RSRP1-214ENST00000566599 RUSC2Q8N2Y8 1516 aa37.36■■■■□ 3.57
RSRP1-214ENST00000566599 PRG4Q92954 1404 aaPredicted RBP37.32■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms