RNA–Protein interactions for RNA: ENST00000566317.1

ZC3H18-207, Transcript of zinc finger CCCH-type containing 18, humanhuman

TSL 2

Gene ZC3H18, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H18-207ENST00000566317 NISCHQ9Y2I1 1504 aa31.72■■■□□ 2.67
ZC3H18-207ENST00000566317 CCDC180Q9P1Z9 1646 aa28.13■■■□□ 2.09
ZC3H18-207ENST00000566317 ABCC9O60706 1549 aa27.8■■■□□ 2.04
ZC3H18-207ENST00000566317 RB1CC1Q8TDY2 1594 aa26.57■■□□□ 1.84
ZC3H18-207ENST00000566317 NACADO15069 1562 aa26.53■■□□□ 1.84
ZC3H18-207ENST00000566317 DCAF8L2P0C7V8 631 aa26.52■■□□□ 1.84
ZC3H18-207ENST00000566317 ZCCHC6Q5VYS8 1495 aaKnown RBP26.4■■□□□ 1.82
ZC3H18-207ENST00000566317 MYO15BQ96JP2 1530 aa26.36■■□□□ 1.81
ZC3H18-207ENST00000566317 DCAF1Q9Y4B6 1507 aa26.2■■□□□ 1.79
ZC3H18-207ENST00000566317 PABPN1Q86U42 306 aaKnown RBP eCLIP26.01■■□□□ 1.75
ZC3H18-207ENST00000566317 UNC13AQ9UPW8 1703 aa25.95■■□□□ 1.74
ZC3H18-207ENST00000566317 BICRAQ9NZM4 1560 aa25.9■■□□□ 1.74
ZC3H18-207ENST00000566317 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
ZC3H18-207ENST00000566317 SCRIBQ14160 1630 aa25.74■■□□□ 1.71
ZC3H18-207ENST00000566317 SHROOM4Q9ULL8 1493 aa25.5■■□□□ 1.67
ZC3H18-207ENST00000566317 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
ZC3H18-207ENST00000566317 CC2D2AQ9P2K1 1620 aa25.09■■□□□ 1.61
ZC3H18-207ENST00000566317 CECR2Q9BXF3 1484 aa24.98■■□□□ 1.59
ZC3H18-207ENST00000566317 SMARCA4P51532 1647 aa24.6■■□□□ 1.53
ZC3H18-207ENST00000566317 NCAPD3P42695 1498 aa24.57■■□□□ 1.52
ZC3H18-207ENST00000566317 ATAD2BQ9ULI0 1458 aa24.57■■□□□ 1.52
ZC3H18-207ENST00000566317 BAZ1AQ9NRL2 1556 aaPredicted RBP24.52■■□□□ 1.52
ZC3H18-207ENST00000566317 MROH2BQ7Z745 1585 aa24.48■■□□□ 1.51
ZC3H18-207ENST00000566317 SMARCA2P51531 1590 aa24.42■■□□□ 1.5
ZC3H18-207ENST00000566317 PEG3Q9GZU2 1588 aa24.38■■□□□ 1.49
ZC3H18-207ENST00000566317 HMGXB3Q12766 1538 aa24.37■■□□□ 1.49
ZC3H18-207ENST00000566317 BAZ1BQ9UIG0 1483 aaKnown RBP24.28■■□□□ 1.48
ZC3H18-207ENST00000566317 RSF1Q96T23 1441 aaPredicted RBP24.17■■□□□ 1.46
ZC3H18-207ENST00000566317 WIZO95785 1651 aa24.15■■□□□ 1.46
ZC3H18-207ENST00000566317 NESP48681 1621 aa24.06■■□□□ 1.44
ZC3H18-207ENST00000566317 ERCC6Q03468 1493 aa23.87■■□□□ 1.41
ZC3H18-207ENST00000566317 TOP2AP11388 1531 aaKnown RBP23.87■■□□□ 1.41
ZC3H18-207ENST00000566317 LAMC3Q9Y6N6 1575 aa23.84■■□□□ 1.41
ZC3H18-207ENST00000566317 CADPSQ9ULU8 1353 aa23.84■■□□□ 1.41
ZC3H18-207ENST00000566317 CUX2O14529 1486 aa23.71■■□□□ 1.39
ZC3H18-207ENST00000566317 PDS5BQ9NTI5 1447 aa23.71■■□□□ 1.39
ZC3H18-207ENST00000566317 CFTRP13569 1480 aa23.67■■□□□ 1.38
ZC3H18-207ENST00000566317 CCDC88BA6NC98 1476 aa23.66■■□□□ 1.38
ZC3H18-207ENST00000566317 THOC2Q8NI27 1593 aaKnown RBP23.65■■□□□ 1.38
ZC3H18-207ENST00000566317 KIF21AQ7Z4S6 1674 aa23.64■■□□□ 1.37
ZC3H18-207ENST00000566317 FANCD2Q9BXW9 1451 aa23.54■■□□□ 1.36
ZC3H18-207ENST00000566317 MRC2Q9UBG0 1479 aa23.5■■□□□ 1.35
ZC3H18-207ENST00000566317 CEP164Q9UPV0 1460 aa23.48■■□□□ 1.35
ZC3H18-207ENST00000566317 WDR62O43379 1518 aa23.44■■□□□ 1.34
ZC3H18-207ENST00000566317 SUPT5HO00267 1087 aaKnown RBP23.39■■□□□ 1.33
ZC3H18-207ENST00000566317 URB2Q14146 1524 aaKnown RBP23.36■■□□□ 1.33
ZC3H18-207ENST00000566317 PRDM2Q13029 1718 aa23.26■■□□□ 1.31
ZC3H18-207ENST00000566317 DNAJC5Q9H3Z4 198 aa23.24■■□□□ 1.31
ZC3H18-207ENST00000566317 TOPBP1Q92547 1522 aa23.16■■□□□ 1.3
ZC3H18-207ENST00000566317 DNMBPQ6XZF7 1577 aa23.07■■□□□ 1.28
ZC3H18-207ENST00000566317 ABCC8Q09428 1581 aa23.05■■□□□ 1.28
ZC3H18-207ENST00000566317 IFT140Q96RY7 1462 aa23.02■■□□□ 1.28
ZC3H18-207ENST00000566317 ZNF608Q9ULD9 1512 aaPredicted RBP23.02■■□□□ 1.28
ZC3H18-207ENST00000566317 POLA1P09884 1462 aaPredicted RBP22.97■■□□□ 1.27
ZC3H18-207ENST00000566317 CUX1P39880 1505 aa22.96■■□□□ 1.27
ZC3H18-207ENST00000566317 RAD54L2Q9Y4B4 1467 aa22.91■■□□□ 1.26
ZC3H18-207ENST00000566317 TARBP1Q13395 1621 aaKnown RBP22.9■■□□□ 1.26
ZC3H18-207ENST00000566317 FGD5Q6ZNL6 1462 aa22.87■■□□□ 1.25
ZC3H18-207ENST00000566317 SOGA1O94964 1423 aa22.85■■□□□ 1.25
ZC3H18-207ENST00000566317 AQRO60306 1485 aaKnown RBP eCLIP22.85■■□□□ 1.252e-7■■■■■ 50.5
ZC3H18-207ENST00000566317 EIF4G3O43432 1585 aaKnown RBP22.81■■□□□ 1.24
ZC3H18-207ENST00000566317 TDRD9Q8NDG6 1382 aaKnown RBP22.78■■□□□ 1.24
ZC3H18-207ENST00000566317 OSCARQ8IYS5 282 aa22.72■■□□□ 1.23
ZC3H18-207ENST00000566317 WRNQ14191 1432 aaPredicted RBP eCLIP22.72■■□□□ 1.23
ZC3H18-207ENST00000566317 SYNJ1O43426 1573 aa22.69■■□□□ 1.22
ZC3H18-207ENST00000566317 TOP2BQ02880 1626 aa22.65■■□□□ 1.22
ZC3H18-207ENST00000566317 ABCA10Q8WWZ4 1543 aa22.65■■□□□ 1.22
ZC3H18-207ENST00000566317 WDR97A6NE52 1622 aa22.64■■□□□ 1.21
ZC3H18-207ENST00000566317 BIVM-ERCC5R4GMW8 1640 aa22.63■■□□□ 1.21
ZC3H18-207ENST00000566317 SNAPC4Q5SXM2 1469 aa22.6■■□□□ 1.21
ZC3H18-207ENST00000566317 GRIN2BQ13224 1484 aa22.58■■□□□ 1.2
ZC3H18-207ENST00000566317 GAPVD1Q14C86 1478 aa22.56■■□□□ 1.2
ZC3H18-207ENST00000566317 ABCA5Q8WWZ7 1642 aa22.54■■□□□ 1.2
ZC3H18-207ENST00000566317 FBLN2P98095 1184 aa22.52■■□□□ 1.2
ZC3H18-207ENST00000566317 MAGI1Q96QZ7 1491 aaPredicted RBP22.52■■□□□ 1.2
ZC3H18-207ENST00000566317 CHD1O14646 1710 aa22.5■■□□□ 1.19
ZC3H18-207ENST00000566317 SYNJ2O15056 1496 aa22.45■■□□□ 1.18
ZC3H18-207ENST00000566317 CHMP7Q8WUX9 453 aaPredicted RBP22.44■■□□□ 1.18
ZC3H18-207ENST00000566317 PBRM1Q86U86 1689 aa22.43■■□□□ 1.18
ZC3H18-207ENST00000566317 ARHGEF11O15085 1522 aa22.37■■□□□ 1.17
ZC3H18-207ENST00000566317 RIMBP3CA6NJZ7 1639 aa22.36■■□□□ 1.17
ZC3H18-207ENST00000566317 RIMBP3BA6NNM3 1639 aa22.36■■□□□ 1.17
ZC3H18-207ENST00000566317 RIMBP3Q9UFD9 1639 aa22.36■■□□□ 1.17
ZC3H18-207ENST00000566317 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
ZC3H18-207ENST00000566317 CLASP1Q7Z460 1538 aa22.36■■□□□ 1.17
ZC3H18-207ENST00000566317 ADAMTS12P58397 1594 aa22.33■■□□□ 1.17
ZC3H18-207ENST00000566317 ERICH3Q5RHP9 1530 aa22.32■■□□□ 1.16
ZC3H18-207ENST00000566317 FHAD1B1AJZ9 1412 aa22.31■■□□□ 1.16
ZC3H18-207ENST00000566317 GRIN2AQ12879 1464 aa22.3■■□□□ 1.16
ZC3H18-207ENST00000566317 IGF1RP08069 1367 aa22.25■■□□□ 1.15
ZC3H18-207ENST00000566317 NUP160Q12769 1436 aa22.25■■□□□ 1.15
ZC3H18-207ENST00000566317 ARAP1Q96P48 1450 aa22.23■■□□□ 1.15
ZC3H18-207ENST00000566317 KIF27Q86VH2 1401 aa22.23■■□□□ 1.15
ZC3H18-207ENST00000566317 CEP170Q5SW79 1584 aa22.21■■□□□ 1.15
ZC3H18-207ENST00000566317 CYB5RLQ6IPT4 315 aa22.19■■□□□ 1.14
ZC3H18-207ENST00000566317 RUSC2Q8N2Y8 1516 aa22.11■■□□□ 1.13
ZC3H18-207ENST00000566317 ERCC6L2Q5T890 1561 aa22.1■■□□□ 1.13
ZC3H18-207ENST00000566317 CARMIL1Q5VZK9 1371 aa22.06■■□□□ 1.12
ZC3H18-207ENST00000566317 SHROOM2Q13796 1616 aa22.04■■□□□ 1.12
ZC3H18-207ENST00000566317 CUL7Q14999 1698 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms