RNA–Protein interactions for RNA: ENST00000566259.1

CPNE2-207, Transcript of copine 2, humanhuman

TSL 3

Gene CPNE2, Length 404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-207ENST00000566259 NISCHQ9Y2I1 1504 aa39.86■■■■□ 3.97
CPNE2-207ENST00000566259 ABCC9O60706 1549 aa36.65■■■■□ 3.46
CPNE2-207ENST00000566259 CCDC180Q9P1Z9 1646 aa36.06■■■■□ 3.36
CPNE2-207ENST00000566259 DNAJC5BQ9UF47 199 aa34.93■■■■□ 3.18
CPNE2-207ENST00000566259 RB1CC1Q8TDY2 1594 aa34.62■■■■□ 3.13
CPNE2-207ENST00000566259 NACADO15069 1562 aa34.23■■■■□ 3.07
CPNE2-207ENST00000566259 PABPN1Q86U42 306 aaKnown RBP eCLIP34■■■■□ 3.03
CPNE2-207ENST00000566259 DCAF8L2P0C7V8 631 aa33.86■■■■□ 3.01
CPNE2-207ENST00000566259 UNC13AQ9UPW8 1703 aa33.84■■■■□ 3.01
CPNE2-207ENST00000566259 BICRAQ9NZM4 1560 aa33.64■■■□□ 2.98
CPNE2-207ENST00000566259 MYO15BQ96JP2 1530 aa33.57■■■□□ 2.96
CPNE2-207ENST00000566259 SHROOM4Q9ULL8 1493 aa33.14■■■□□ 2.9
CPNE2-207ENST00000566259 CECR2Q9BXF3 1484 aa33.09■■■□□ 2.89
CPNE2-207ENST00000566259 CC2D2AQ9P2K1 1620 aa33.09■■■□□ 2.89
CPNE2-207ENST00000566259 ZCCHC6Q5VYS8 1495 aaKnown RBP32.91■■■□□ 2.86
CPNE2-207ENST00000566259 DCAF1Q9Y4B6 1507 aa32.9■■■□□ 2.86
CPNE2-207ENST00000566259 EIF4G1Q04637 1599 aaKnown RBP32.87■■■□□ 2.85
CPNE2-207ENST00000566259 SCRIBQ14160 1630 aa32.8■■■□□ 2.84
CPNE2-207ENST00000566259 DNAJC5Q9H3Z4 198 aa32.55■■■□□ 2.8
CPNE2-207ENST00000566259 CUX2O14529 1486 aa31.87■■■□□ 2.69
CPNE2-207ENST00000566259 ERCC6Q03468 1493 aa31.69■■■□□ 2.66
CPNE2-207ENST00000566259 NCAPD3P42695 1498 aa31.61■■■□□ 2.65
CPNE2-207ENST00000566259 ATAD2BQ9ULI0 1458 aa31.42■■■□□ 2.62
CPNE2-207ENST00000566259 HMGXB3Q12766 1538 aa31.33■■■□□ 2.61
CPNE2-207ENST00000566259 NESP48681 1621 aa31.31■■■□□ 2.6
CPNE2-207ENST00000566259 SMARCA2P51531 1590 aa31.3■■■□□ 2.6
CPNE2-207ENST00000566259 SMARCA4P51532 1647 aa31.24■■■□□ 2.59
CPNE2-207ENST00000566259 THOC2Q8NI27 1593 aaKnown RBP31.14■■■□□ 2.58
CPNE2-207ENST00000566259 BAZ1BQ9UIG0 1483 aaKnown RBP31.08■■■□□ 2.57
CPNE2-207ENST00000566259 LAMC3Q9Y6N6 1575 aa31■■■□□ 2.55
CPNE2-207ENST00000566259 BAZ1AQ9NRL2 1556 aaPredicted RBP30.99■■■□□ 2.55
CPNE2-207ENST00000566259 PEG3Q9GZU2 1588 aa30.96■■■□□ 2.55
CPNE2-207ENST00000566259 KIF21AQ7Z4S6 1674 aa30.9■■■□□ 2.54
CPNE2-207ENST00000566259 TRIM41Q8WV44 630 aa30.84■■■□□ 2.53
CPNE2-207ENST00000566259 PDS5BQ9NTI5 1447 aa30.83■■■□□ 2.53
CPNE2-207ENST00000566259 MROH2BQ7Z745 1585 aa30.7■■■□□ 2.5
CPNE2-207ENST00000566259 MRC2Q9UBG0 1479 aa30.62■■■□□ 2.49
CPNE2-207ENST00000566259 CADPSQ9ULU8 1353 aa30.61■■■□□ 2.49
CPNE2-207ENST00000566259 WDR62O43379 1518 aa30.57■■■□□ 2.49
CPNE2-207ENST00000566259 CEP164Q9UPV0 1460 aa30.37■■■□□ 2.45
CPNE2-207ENST00000566259 WIZO95785 1651 aa30.3■■■□□ 2.44
CPNE2-207ENST00000566259 FANCD2Q9BXW9 1451 aa30.27■■■□□ 2.44
CPNE2-207ENST00000566259 OSCARQ8IYS5 282 aa30.27■■■□□ 2.44
CPNE2-207ENST00000566259 CFTRP13569 1480 aa30.14■■■□□ 2.42
CPNE2-207ENST00000566259 URB2Q14146 1524 aaKnown RBP30.06■■■□□ 2.4
CPNE2-207ENST00000566259 RIMBP3CA6NJZ7 1639 aa29.98■■■□□ 2.39
CPNE2-207ENST00000566259 RIMBP3BA6NNM3 1639 aa29.98■■■□□ 2.39
CPNE2-207ENST00000566259 RIMBP3Q9UFD9 1639 aa29.98■■■□□ 2.39
CPNE2-207ENST00000566259 TOP2AP11388 1531 aaKnown RBP29.88■■■□□ 2.37
CPNE2-207ENST00000566259 RSF1Q96T23 1441 aaPredicted RBP29.83■■■□□ 2.37
CPNE2-207ENST00000566259 ARHGEF11O15085 1522 aa29.82■■■□□ 2.36
CPNE2-207ENST00000566259 PRDM2Q13029 1718 aa29.79■■■□□ 2.36
CPNE2-207ENST00000566259 ZNF608Q9ULD9 1512 aaPredicted RBP29.79■■■□□ 2.36
CPNE2-207ENST00000566259 IFT140Q96RY7 1462 aa29.78■■■□□ 2.36
CPNE2-207ENST00000566259 TOPBP1Q92547 1522 aa29.62■■■□□ 2.33
CPNE2-207ENST00000566259 EIF4G3O43432 1585 aaKnown RBP29.61■■■□□ 2.33
CPNE2-207ENST00000566259 CYB5RLQ6IPT4 315 aa29.6■■■□□ 2.33
CPNE2-207ENST00000566259 SUPT5HO00267 1087 aaKnown RBP29.54■■■□□ 2.32
CPNE2-207ENST00000566259 CCDC88BA6NC98 1476 aa29.54■■■□□ 2.32
CPNE2-207ENST00000566259 ABCC8Q09428 1581 aa29.52■■■□□ 2.32
CPNE2-207ENST00000566259 CHD1O14646 1710 aa29.5■■■□□ 2.31
CPNE2-207ENST00000566259 ARAP1Q96P48 1450 aa29.48■■■□□ 2.31
CPNE2-207ENST00000566259 TRHP20396 242 aaPredicted RBP29.48■■■□□ 2.31
CPNE2-207ENST00000566259 DNMBPQ6XZF7 1577 aa29.47■■■□□ 2.31
CPNE2-207ENST00000566259 AQRO60306 1485 aaKnown RBP eCLIP29.43■■■□□ 2.3
CPNE2-207ENST00000566259 TARBP1Q13395 1621 aaKnown RBP29.42■■■□□ 2.3
CPNE2-207ENST00000566259 FBLN2P98095 1184 aa29.34■■■□□ 2.29
CPNE2-207ENST00000566259 POLA1P09884 1462 aaPredicted RBP29.29■■■□□ 2.28
CPNE2-207ENST00000566259 RAD54L2Q9Y4B4 1467 aa29.17■■■□□ 2.26
CPNE2-207ENST00000566259 CLASP1Q7Z460 1538 aa29.16■■■□□ 2.26
CPNE2-207ENST00000566259 TDRD9Q8NDG6 1382 aaKnown RBP29.14■■■□□ 2.26
CPNE2-207ENST00000566259 SOGA1O94964 1423 aa29.12■■■□□ 2.25
CPNE2-207ENST00000566259 SNAPC4Q5SXM2 1469 aa29.12■■■□□ 2.25
CPNE2-207ENST00000566259 AEBP2Q6ZN18 517 aaPredicted RBP29.09■■■□□ 2.25
CPNE2-207ENST00000566259 WDR97A6NE52 1622 aa29.09■■■□□ 2.25
CPNE2-207ENST00000566259 SYNJ1O43426 1573 aa29.08■■■□□ 2.25
CPNE2-207ENST00000566259 CHMP7Q8WUX9 453 aaPredicted RBP29.03■■■□□ 2.24
CPNE2-207ENST00000566259 MAGI1Q96QZ7 1491 aaPredicted RBP29.03■■■□□ 2.24
CPNE2-207ENST00000566259 FGD5Q6ZNL6 1462 aa29.01■■■□□ 2.23
CPNE2-207ENST00000566259 GRIN2BQ13224 1484 aa28.96■■■□□ 2.23
CPNE2-207ENST00000566259 SYNJ2O15056 1496 aa28.94■■■□□ 2.22
CPNE2-207ENST00000566259 CUX1P39880 1505 aa28.89■■■□□ 2.21
CPNE2-207ENST00000566259 GAPVD1Q14C86 1478 aa28.88■■■□□ 2.21
CPNE2-207ENST00000566259 PBRM1Q86U86 1689 aa28.81■■■□□ 2.2
CPNE2-207ENST00000566259 ABCA5Q8WWZ7 1642 aa28.67■■■□□ 2.18
CPNE2-207ENST00000566259 ERCC6L2Q5T890 1561 aa28.65■■■□□ 2.18
CPNE2-207ENST00000566259 ABCA10Q8WWZ4 1543 aa28.64■■■□□ 2.18
CPNE2-207ENST00000566259 GRIN2AQ12879 1464 aa28.59■■■□□ 2.17
CPNE2-207ENST00000566259 CEP170Q5SW79 1584 aa28.55■■■□□ 2.16
CPNE2-207ENST00000566259 NUP160Q12769 1436 aa28.52■■■□□ 2.16
CPNE2-207ENST00000566259 ADAMTS12P58397 1594 aa28.5■■■□□ 2.15
CPNE2-207ENST00000566259 SHROOM2Q13796 1616 aa28.48■■■□□ 2.15
CPNE2-207ENST00000566259 KIF13AQ9H1H9 1805 aa28.44■■■□□ 2.14
CPNE2-207ENST00000566259 WRNQ14191 1432 aaPredicted RBP eCLIP28.4■■■□□ 2.14
CPNE2-207ENST00000566259 FHAD1B1AJZ9 1412 aa28.37■■■□□ 2.13
CPNE2-207ENST00000566259 ERICH3Q5RHP9 1530 aa28.28■■■□□ 2.12
CPNE2-207ENST00000566259 PRG4Q92954 1404 aaPredicted RBP28.28■■■□□ 2.12
CPNE2-207ENST00000566259 BIVM-ERCC5R4GMW8 1640 aa28.26■■■□□ 2.11
CPNE2-207ENST00000566259 TOP2BQ02880 1626 aa28.25■■■□□ 2.11
CPNE2-207ENST00000566259 ABCC10Q5T3U5 1492 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms