RNA–Protein interactions for RNA: ENST00000566234.2

CDIP1-208, Transcript of cell death inducing p53 target 1, humanhuman

TSL 3

Gene CDIP1, Length 299 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-208ENST00000566234 NISCHQ9Y2I1 1504 aa32.61■■■□□ 2.81
CDIP1-208ENST00000566234 CCDC180Q9P1Z9 1646 aa29.03■■■□□ 2.24
CDIP1-208ENST00000566234 ABCC9O60706 1549 aa28.88■■■□□ 2.21
CDIP1-208ENST00000566234 RB1CC1Q8TDY2 1594 aa27.57■■■□□ 2
CDIP1-208ENST00000566234 DCAF8L2P0C7V8 631 aa27.51■■□□□ 1.99
CDIP1-208ENST00000566234 NACADO15069 1562 aa27.46■■□□□ 1.99
CDIP1-208ENST00000566234 MYO15BQ96JP2 1530 aa27.2■■□□□ 1.94
CDIP1-208ENST00000566234 ZCCHC6Q5VYS8 1495 aaKnown RBP27.07■■□□□ 1.92
CDIP1-208ENST00000566234 PABPN1Q86U42 306 aaKnown RBP eCLIP26.99■■□□□ 1.91
CDIP1-208ENST00000566234 DCAF1Q9Y4B6 1507 aa26.95■■□□□ 1.9
CDIP1-208ENST00000566234 DNAJC5BQ9UF47 199 aa26.9■■□□□ 1.9
CDIP1-208ENST00000566234 UNC13AQ9UPW8 1703 aa26.78■■□□□ 1.88
CDIP1-208ENST00000566234 BICRAQ9NZM4 1560 aa26.74■■□□□ 1.87
CDIP1-208ENST00000566234 SCRIBQ14160 1630 aa26.51■■□□□ 1.83
CDIP1-208ENST00000566234 SHROOM4Q9ULL8 1493 aa26.45■■□□□ 1.82
CDIP1-208ENST00000566234 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
CDIP1-208ENST00000566234 CC2D2AQ9P2K1 1620 aa26.04■■□□□ 1.76
CDIP1-208ENST00000566234 CECR2Q9BXF3 1484 aa25.99■■□□□ 1.75
CDIP1-208ENST00000566234 NCAPD3P42695 1498 aa25.4■■□□□ 1.66
CDIP1-208ENST00000566234 ATAD2BQ9ULI0 1458 aa25.35■■□□□ 1.65
CDIP1-208ENST00000566234 SMARCA4P51532 1647 aa25.33■■□□□ 1.65
CDIP1-208ENST00000566234 BAZ1AQ9NRL2 1556 aaPredicted RBP25.27■■□□□ 1.64
CDIP1-208ENST00000566234 SMARCA2P51531 1590 aa25.27■■□□□ 1.64
CDIP1-208ENST00000566234 HMGXB3Q12766 1538 aa25.17■■□□□ 1.62
CDIP1-208ENST00000566234 MROH2BQ7Z745 1585 aa25.13■■□□□ 1.61
CDIP1-208ENST00000566234 BAZ1BQ9UIG0 1483 aaKnown RBP25.1■■□□□ 1.61
CDIP1-208ENST00000566234 PEG3Q9GZU2 1588 aa25.1■■□□□ 1.61
CDIP1-208ENST00000566234 ERCC6Q03468 1493 aa24.92■■□□□ 1.58
CDIP1-208ENST00000566234 NESP48681 1621 aa24.87■■□□□ 1.57
CDIP1-208ENST00000566234 WIZO95785 1651 aa24.78■■□□□ 1.56
CDIP1-208ENST00000566234 CUX2O14529 1486 aa24.77■■□□□ 1.56
CDIP1-208ENST00000566234 RSF1Q96T23 1441 aaPredicted RBP24.75■■□□□ 1.55
CDIP1-208ENST00000566234 LAMC3Q9Y6N6 1575 aa24.71■■□□□ 1.55
CDIP1-208ENST00000566234 CADPSQ9ULU8 1353 aa24.67■■□□□ 1.54
CDIP1-208ENST00000566234 PDS5BQ9NTI5 1447 aa24.64■■□□□ 1.54
CDIP1-208ENST00000566234 TOP2AP11388 1531 aaKnown RBP24.52■■□□□ 1.52
CDIP1-208ENST00000566234 DNAJC5Q9H3Z4 198 aa24.5■■□□□ 1.51
CDIP1-208ENST00000566234 THOC2Q8NI27 1593 aaKnown RBP24.5■■□□□ 1.51
CDIP1-208ENST00000566234 KIF21AQ7Z4S6 1674 aa24.45■■□□□ 1.5
CDIP1-208ENST00000566234 CFTRP13569 1480 aa24.41■■□□□ 1.5
CDIP1-208ENST00000566234 MRC2Q9UBG0 1479 aa24.37■■□□□ 1.49
CDIP1-208ENST00000566234 FANCD2Q9BXW9 1451 aa24.34■■□□□ 1.49
CDIP1-208ENST00000566234 CEP164Q9UPV0 1460 aa24.33■■□□□ 1.49
CDIP1-208ENST00000566234 CCDC88BA6NC98 1476 aa24.3■■□□□ 1.48
CDIP1-208ENST00000566234 WDR62O43379 1518 aa24.27■■□□□ 1.48
CDIP1-208ENST00000566234 URB2Q14146 1524 aaKnown RBP24.1■■□□□ 1.45
CDIP1-208ENST00000566234 PRDM2Q13029 1718 aa23.98■■□□□ 1.43
CDIP1-208ENST00000566234 SUPT5HO00267 1087 aaKnown RBP23.92■■□□□ 1.42
CDIP1-208ENST00000566234 TOPBP1Q92547 1522 aa23.89■■□□□ 1.42
CDIP1-208ENST00000566234 ABCC8Q09428 1581 aa23.89■■□□□ 1.41
CDIP1-208ENST00000566234 IFT140Q96RY7 1462 aa23.86■■□□□ 1.41
CDIP1-208ENST00000566234 DNMBPQ6XZF7 1577 aa23.81■■□□□ 1.4
CDIP1-208ENST00000566234 ZNF608Q9ULD9 1512 aaPredicted RBP23.78■■□□□ 1.4
CDIP1-208ENST00000566234 OSCARQ8IYS5 282 aa23.76■■□□□ 1.39
CDIP1-208ENST00000566234 POLA1P09884 1462 aaPredicted RBP23.68■■□□□ 1.38
CDIP1-208ENST00000566234 AQRO60306 1485 aaKnown RBP eCLIP23.63■■□□□ 1.37
CDIP1-208ENST00000566234 TARBP1Q13395 1621 aaKnown RBP23.62■■□□□ 1.37
CDIP1-208ENST00000566234 SOGA1O94964 1423 aa23.62■■□□□ 1.37
CDIP1-208ENST00000566234 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
CDIP1-208ENST00000566234 EIF4G3O43432 1585 aaKnown RBP23.59■■□□□ 1.37
CDIP1-208ENST00000566234 CUX1P39880 1505 aa23.58■■□□□ 1.36
CDIP1-208ENST00000566234 FGD5Q6ZNL6 1462 aa23.56■■□□□ 1.36
CDIP1-208ENST00000566234 TDRD9Q8NDG6 1382 aaKnown RBP23.54■■□□□ 1.36
CDIP1-208ENST00000566234 TRIM41Q8WV44 630 aa23.54■■□□□ 1.36
CDIP1-208ENST00000566234 FBLN2P98095 1184 aa23.46■■□□□ 1.35
CDIP1-208ENST00000566234 WDR97A6NE52 1622 aa23.4■■□□□ 1.34
CDIP1-208ENST00000566234 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
CDIP1-208ENST00000566234 SNAPC4Q5SXM2 1469 aa23.36■■□□□ 1.33
CDIP1-208ENST00000566234 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.33
CDIP1-208ENST00000566234 CHMP7Q8WUX9 453 aaPredicted RBP23.33■■□□□ 1.33
CDIP1-208ENST00000566234 ABCA10Q8WWZ4 1543 aa23.33■■□□□ 1.32
CDIP1-208ENST00000566234 GAPVD1Q14C86 1478 aa23.31■■□□□ 1.32
CDIP1-208ENST00000566234 MAGI1Q96QZ7 1491 aaPredicted RBP23.31■■□□□ 1.32
CDIP1-208ENST00000566234 CHD1O14646 1710 aa23.29■■□□□ 1.32
CDIP1-208ENST00000566234 ARHGEF11O15085 1522 aa23.28■■□□□ 1.32
CDIP1-208ENST00000566234 RIMBP3CA6NJZ7 1639 aa23.28■■□□□ 1.32
CDIP1-208ENST00000566234 RIMBP3BA6NNM3 1639 aa23.28■■□□□ 1.32
CDIP1-208ENST00000566234 RIMBP3Q9UFD9 1639 aa23.28■■□□□ 1.32
CDIP1-208ENST00000566234 TOP2BQ02880 1626 aa23.26■■□□□ 1.31
CDIP1-208ENST00000566234 SYNJ2O15056 1496 aa23.24■■□□□ 1.31
CDIP1-208ENST00000566234 SYNJ1O43426 1573 aa23.23■■□□□ 1.31
CDIP1-208ENST00000566234 BIVM-ERCC5R4GMW8 1640 aa23.22■■□□□ 1.31
CDIP1-208ENST00000566234 ABCA5Q8WWZ7 1642 aa23.2■■□□□ 1.3
CDIP1-208ENST00000566234 CYB5RLQ6IPT4 315 aa23.19■■□□□ 1.3
CDIP1-208ENST00000566234 PBRM1Q86U86 1689 aa23.14■■□□□ 1.29
CDIP1-208ENST00000566234 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
CDIP1-208ENST00000566234 ARAP1Q96P48 1450 aa23.08■■□□□ 1.29
CDIP1-208ENST00000566234 FHAD1B1AJZ9 1412 aa23.04■■□□□ 1.28
CDIP1-208ENST00000566234 GRIN2AQ12879 1464 aa23.04■■□□□ 1.28
CDIP1-208ENST00000566234 ERICH3Q5RHP9 1530 aa23.03■■□□□ 1.28
CDIP1-208ENST00000566234 ADAMTS12P58397 1594 aa23.01■■□□□ 1.27
CDIP1-208ENST00000566234 NUP160Q12769 1436 aa22.96■■□□□ 1.27
CDIP1-208ENST00000566234 CEP170Q5SW79 1584 aa22.9■■□□□ 1.26
CDIP1-208ENST00000566234 KIF27Q86VH2 1401 aa22.89■■□□□ 1.25
CDIP1-208ENST00000566234 IGF1RP08069 1367 aa22.88■■□□□ 1.25
CDIP1-208ENST00000566234 TRHP20396 242 aaPredicted RBP22.83■■□□□ 1.25
CDIP1-208ENST00000566234 JPH4Q96JJ6 628 aa22.8■■□□□ 1.24
CDIP1-208ENST00000566234 ERCC6L2Q5T890 1561 aa22.8■■□□□ 1.24
CDIP1-208ENST00000566234 SHROOM2Q13796 1616 aa22.75■■□□□ 1.23
CDIP1-208ENST00000566234 PRG4Q92954 1404 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms