RNA–Protein interactions for RNA: ENST00000566233.5

RAB11A-205, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 4

Gene RAB11A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-205ENST00000566233 NISCHQ9Y2I1 1504 aa29.71■■■□□ 2.35
RAB11A-205ENST00000566233 CCDC180Q9P1Z9 1646 aa26.59■■□□□ 1.85
RAB11A-205ENST00000566233 ABCC9O60706 1549 aa26.28■■□□□ 1.8
RAB11A-205ENST00000566233 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.61
RAB11A-205ENST00000566233 NACADO15069 1562 aa25.03■■□□□ 1.6
RAB11A-205ENST00000566233 DCAF8L2P0C7V8 631 aa24.82■■□□□ 1.56
RAB11A-205ENST00000566233 MYO15BQ96JP2 1530 aa24.79■■□□□ 1.56
RAB11A-205ENST00000566233 ZCCHC6Q5VYS8 1495 aaKnown RBP24.72■■□□□ 1.55
RAB11A-205ENST00000566233 UNC13AQ9UPW8 1703 aa24.61■■□□□ 1.53
RAB11A-205ENST00000566233 DCAF1Q9Y4B6 1507 aa24.57■■□□□ 1.52
RAB11A-205ENST00000566233 PABPN1Q86U42 306 aaKnown RBP eCLIP24.46■■□□□ 1.51
RAB11A-205ENST00000566233 BICRAQ9NZM4 1560 aa24.44■■□□□ 1.5
RAB11A-205ENST00000566233 DNAJC5BQ9UF47 199 aa24.37■■□□□ 1.49
RAB11A-205ENST00000566233 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
RAB11A-205ENST00000566233 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
RAB11A-205ENST00000566233 EIF4G1Q04637 1599 aaKnown RBP23.8■■□□□ 1.4
RAB11A-205ENST00000566233 CC2D2AQ9P2K1 1620 aa23.77■■□□□ 1.4
RAB11A-205ENST00000566233 CECR2Q9BXF3 1484 aa23.64■■□□□ 1.38
RAB11A-205ENST00000566233 SMARCA4P51532 1647 aa23.15■■□□□ 1.3
RAB11A-205ENST00000566233 NCAPD3P42695 1498 aa23.09■■□□□ 1.29
RAB11A-205ENST00000566233 ATAD2BQ9ULI0 1458 aa23.07■■□□□ 1.28
RAB11A-205ENST00000566233 BAZ1AQ9NRL2 1556 aaPredicted RBP23.05■■□□□ 1.28
RAB11A-205ENST00000566233 SMARCA2P51531 1590 aa23.02■■□□□ 1.28
RAB11A-205ENST00000566233 HMGXB3Q12766 1538 aa22.99■■□□□ 1.27
RAB11A-205ENST00000566233 PEG3Q9GZU2 1588 aa22.93■■□□□ 1.26
RAB11A-205ENST00000566233 MROH2BQ7Z745 1585 aa22.91■■□□□ 1.26
RAB11A-205ENST00000566233 BAZ1BQ9UIG0 1483 aaKnown RBP22.86■■□□□ 1.25
RAB11A-205ENST00000566233 NESP48681 1621 aa22.67■■□□□ 1.22
RAB11A-205ENST00000566233 ERCC6Q03468 1493 aa22.66■■□□□ 1.22
RAB11A-205ENST00000566233 WIZO95785 1651 aa22.65■■□□□ 1.22
RAB11A-205ENST00000566233 LAMC3Q9Y6N6 1575 aa22.55■■□□□ 1.2
RAB11A-205ENST00000566233 CUX2O14529 1486 aa22.54■■□□□ 1.2
RAB11A-205ENST00000566233 RSF1Q96T23 1441 aaPredicted RBP22.51■■□□□ 1.19
RAB11A-205ENST00000566233 THOC2Q8NI27 1593 aaKnown RBP22.43■■□□□ 1.18
RAB11A-205ENST00000566233 KIF21AQ7Z4S6 1674 aa22.41■■□□□ 1.18
RAB11A-205ENST00000566233 TOP2AP11388 1531 aaKnown RBP22.4■■□□□ 1.18
RAB11A-205ENST00000566233 CADPSQ9ULU8 1353 aa22.38■■□□□ 1.17
RAB11A-205ENST00000566233 PDS5BQ9NTI5 1447 aa22.37■■□□□ 1.17
RAB11A-205ENST00000566233 CFTRP13569 1480 aa22.22■■□□□ 1.15
RAB11A-205ENST00000566233 MRC2Q9UBG0 1479 aa22.2■■□□□ 1.14
RAB11A-205ENST00000566233 WDR62O43379 1518 aa22.16■■□□□ 1.14
RAB11A-205ENST00000566233 CEP164Q9UPV0 1460 aa22.16■■□□□ 1.14
RAB11A-205ENST00000566233 FANCD2Q9BXW9 1451 aa22.15■■□□□ 1.14
RAB11A-205ENST00000566233 DNAJC5Q9H3Z4 198 aa22.15■■□□□ 1.14
RAB11A-205ENST00000566233 CCDC88BA6NC98 1476 aa22.1■■□□□ 1.13
RAB11A-205ENST00000566233 PRDM2Q13029 1718 aa22.06■■□□□ 1.12
RAB11A-205ENST00000566233 URB2Q14146 1524 aaKnown RBP21.98■■□□□ 1.11
RAB11A-205ENST00000566233 TOPBP1Q92547 1522 aa21.78■■□□□ 1.08
RAB11A-205ENST00000566233 DNMBPQ6XZF7 1577 aa21.74■■□□□ 1.07
RAB11A-205ENST00000566233 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
RAB11A-205ENST00000566233 IFT140Q96RY7 1462 aa21.7■■□□□ 1.06
RAB11A-205ENST00000566233 ZNF608Q9ULD9 1512 aaPredicted RBP21.66■■□□□ 1.06
RAB11A-205ENST00000566233 SUPT5HO00267 1087 aaKnown RBP21.63■■□□□ 1.05
RAB11A-205ENST00000566233 TARBP1Q13395 1621 aaKnown RBP21.59■■□□□ 1.05
RAB11A-205ENST00000566233 EIF4G3O43432 1585 aaKnown RBP21.59■■□□□ 1.05
RAB11A-205ENST00000566233 POLA1P09884 1462 aaPredicted RBP21.58■■□□□ 1.05
RAB11A-205ENST00000566233 CUX1P39880 1505 aa21.52■■□□□ 1.04
RAB11A-205ENST00000566233 FGD5Q6ZNL6 1462 aa21.48■■□□□ 1.03
RAB11A-205ENST00000566233 RAD54L2Q9Y4B4 1467 aa21.48■■□□□ 1.03
RAB11A-205ENST00000566233 AQRO60306 1485 aaKnown RBP eCLIP21.46■■□□□ 1.039e-9■■■■□ 19.4
RAB11A-205ENST00000566233 OSCARQ8IYS5 282 aa21.46■■□□□ 1.03
RAB11A-205ENST00000566233 SOGA1O94964 1423 aa21.43■■□□□ 1.02
RAB11A-205ENST00000566233 WDR97A6NE52 1622 aa21.38■■□□□ 1.01
RAB11A-205ENST00000566233 CHD1O14646 1710 aa21.36■■□□□ 1.01
RAB11A-205ENST00000566233 TDRD9Q8NDG6 1382 aaKnown RBP21.36■■□□□ 1.01
RAB11A-205ENST00000566233 SNAPC4Q5SXM2 1469 aa21.29■■□□□ 1
RAB11A-205ENST00000566233 TRIM41Q8WV44 630 aa21.29■■□□□ 1
RAB11A-205ENST00000566233 RIMBP3CA6NJZ7 1639 aa21.27■■□□□ 1
RAB11A-205ENST00000566233 RIMBP3BA6NNM3 1639 aa21.27■■□□□ 1
RAB11A-205ENST00000566233 RIMBP3Q9UFD9 1639 aa21.27■■□□□ 1
RAB11A-205ENST00000566233 BIVM-ERCC5R4GMW8 1640 aa21.26■□□□□ 0.99
RAB11A-205ENST00000566233 ABCA10Q8WWZ4 1543 aa21.25■□□□□ 0.99
RAB11A-205ENST00000566233 GRIN2BQ13224 1484 aa21.25■□□□□ 0.99
RAB11A-205ENST00000566233 SYNJ1O43426 1573 aa21.24■□□□□ 0.99
RAB11A-205ENST00000566233 TOP2BQ02880 1626 aa21.24■□□□□ 0.99
RAB11A-205ENST00000566233 ABCA5Q8WWZ7 1642 aa21.24■□□□□ 0.99
RAB11A-205ENST00000566233 MAGI1Q96QZ7 1491 aaPredicted RBP21.24■□□□□ 0.99
RAB11A-205ENST00000566233 PBRM1Q86U86 1689 aa21.23■□□□□ 0.99
RAB11A-205ENST00000566233 ARHGEF11O15085 1522 aa21.23■□□□□ 0.99
RAB11A-205ENST00000566233 WRNQ14191 1432 aaPredicted RBP eCLIP21.22■□□□□ 0.99
RAB11A-205ENST00000566233 FBLN2P98095 1184 aa21.2■□□□□ 0.98
RAB11A-205ENST00000566233 GAPVD1Q14C86 1478 aa21.2■□□□□ 0.98
RAB11A-205ENST00000566233 SYNJ2O15056 1496 aa21.15■□□□□ 0.98
RAB11A-205ENST00000566233 CLASP1Q7Z460 1538 aa21.14■□□□□ 0.97
RAB11A-205ENST00000566233 CHMP7Q8WUX9 453 aaPredicted RBP21.09■□□□□ 0.97
RAB11A-205ENST00000566233 ADAMTS12P58397 1594 aa21.06■□□□□ 0.96
RAB11A-205ENST00000566233 ARAP1Q96P48 1450 aa21.05■□□□□ 0.96
RAB11A-205ENST00000566233 GRIN2AQ12879 1464 aa21■□□□□ 0.95
RAB11A-205ENST00000566233 ERICH3Q5RHP9 1530 aa20.99■□□□□ 0.95
RAB11A-205ENST00000566233 CYB5RLQ6IPT4 315 aa20.95■□□□□ 0.94
RAB11A-205ENST00000566233 FHAD1B1AJZ9 1412 aa20.94■□□□□ 0.94
RAB11A-205ENST00000566233 CEP170Q5SW79 1584 aa20.93■□□□□ 0.94
RAB11A-205ENST00000566233 NUP160Q12769 1436 aa20.92■□□□□ 0.94
RAB11A-205ENST00000566233 ERCC6L2Q5T890 1561 aa20.82■□□□□ 0.92
RAB11A-205ENST00000566233 SHROOM2Q13796 1616 aa20.82■□□□□ 0.92
RAB11A-205ENST00000566233 KIF27Q86VH2 1401 aa20.78■□□□□ 0.92
RAB11A-205ENST00000566233 RUSC2Q8N2Y8 1516 aa20.77■□□□□ 0.92
RAB11A-205ENST00000566233 CUL7Q14999 1698 aa20.75■□□□□ 0.91
RAB11A-205ENST00000566233 IGF1RP08069 1367 aa20.73■□□□□ 0.91
RAB11A-205ENST00000566233 PRG4Q92954 1404 aaPredicted RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms