RNA–Protein interactions for RNA: ENST00000566206.5

CYLD-210, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best) BASIC

Gene CYLD, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-210ENST00000566206 NISCHQ9Y2I1 1504 aa16.78■□□□□ 0.28
CYLD-210ENST00000566206 CCDC180Q9P1Z9 1646 aa15.35■□□□□ 0.05
CYLD-210ENST00000566206 ABCC9O60706 1549 aa14.93□□□□□ -0.02
CYLD-210ENST00000566206 RB1CC1Q8TDY2 1594 aa14.49□□□□□ -0.09
CYLD-210ENST00000566206 NACADO15069 1562 aa14.42□□□□□ -0.1
CYLD-210ENST00000566206 MYO15BQ96JP2 1530 aa14.36□□□□□ -0.11
CYLD-210ENST00000566206 UNC13AQ9UPW8 1703 aa14.19□□□□□ -0.14
CYLD-210ENST00000566206 SHROOM4Q9ULL8 1493 aa14.13□□□□□ -0.15
CYLD-210ENST00000566206 DCAF1Q9Y4B6 1507 aa14.09□□□□□ -0.15
CYLD-210ENST00000566206 BICRAQ9NZM4 1560 aa14.03□□□□□ -0.16
CYLD-210ENST00000566206 DNAJC5BQ9UF47 199 aa13.97□□□□□ -0.17
CYLD-210ENST00000566206 ZCCHC6Q5VYS8 1495 aaKnown RBP13.94□□□□□ -0.18
CYLD-210ENST00000566206 PABPN1Q86U42 306 aaKnown RBP eCLIP13.7□□□□□ -0.22
CYLD-210ENST00000566206 CC2D2AQ9P2K1 1620 aa13.68□□□□□ -0.22
CYLD-210ENST00000566206 EIF4G1Q04637 1599 aaKnown RBP13.66□□□□□ -0.22
CYLD-210ENST00000566206 SCRIBQ14160 1630 aa13.61□□□□□ -0.23
CYLD-210ENST00000566206 DCAF8L2P0C7V8 631 aa13.57□□□□□ -0.24
CYLD-210ENST00000566206 CECR2Q9BXF3 1484 aa13.57□□□□□ -0.24
CYLD-210ENST00000566206 NCAPD3P42695 1498 aa13.23□□□□□ -0.29
CYLD-210ENST00000566206 HMGXB3Q12766 1538 aa13.23□□□□□ -0.29
CYLD-210ENST00000566206 CUX2O14529 1486 aa13.22□□□□□ -0.29
CYLD-210ENST00000566206 PEG3Q9GZU2 1588 aa13.18□□□□□ -0.3
CYLD-210ENST00000566206 SMARCA2P51531 1590 aa13.17□□□□□ -0.3
CYLD-210ENST00000566206 SMARCA4P51532 1647 aa13.14□□□□□ -0.31
CYLD-210ENST00000566206 ATAD2BQ9ULI0 1458 aa13.1□□□□□ -0.31
CYLD-210ENST00000566206 BAZ1AQ9NRL2 1556 aaPredicted RBP13.08□□□□□ -0.32
CYLD-210ENST00000566206 DNAJC5Q9H3Z4 198 aa13.04□□□□□ -0.32
CYLD-210ENST00000566206 LAMC3Q9Y6N6 1575 aa13.01□□□□□ -0.33
CYLD-210ENST00000566206 THOC2Q8NI27 1593 aaKnown RBP12.99□□□□□ -0.33
CYLD-210ENST00000566206 ERCC6Q03468 1493 aa12.94□□□□□ -0.34
CYLD-210ENST00000566206 BAZ1BQ9UIG0 1483 aaKnown RBP12.94□□□□□ -0.34
CYLD-210ENST00000566206 KIF21AQ7Z4S6 1674 aa12.85□□□□□ -0.35
CYLD-210ENST00000566206 MROH2BQ7Z745 1585 aa12.82□□□□□ -0.36
CYLD-210ENST00000566206 NESP48681 1621 aa12.81□□□□□ -0.36
CYLD-210ENST00000566206 PDS5BQ9NTI5 1447 aa12.8□□□□□ -0.36
CYLD-210ENST00000566206 WDR62O43379 1518 aa12.79□□□□□ -0.36
CYLD-210ENST00000566206 PRDM2Q13029 1718 aa12.74□□□□□ -0.37
CYLD-210ENST00000566206 MRC2Q9UBG0 1479 aa12.73□□□□□ -0.37
CYLD-210ENST00000566206 CADPSQ9ULU8 1353 aa12.71□□□□□ -0.37
CYLD-210ENST00000566206 WIZO95785 1651 aa12.67□□□□□ -0.38
CYLD-210ENST00000566206 TOP2AP11388 1531 aaKnown RBP12.65□□□□□ -0.39
CYLD-210ENST00000566206 CFTRP13569 1480 aa12.63□□□□□ -0.39
CYLD-210ENST00000566206 CEP164Q9UPV0 1460 aa12.62□□□□□ -0.39
CYLD-210ENST00000566206 FANCD2Q9BXW9 1451 aa12.56□□□□□ -0.4
CYLD-210ENST00000566206 RSF1Q96T23 1441 aaPredicted RBP12.52□□□□□ -0.41
CYLD-210ENST00000566206 URB2Q14146 1524 aaKnown RBP12.48□□□□□ -0.41
CYLD-210ENST00000566206 ABCC8Q09428 1581 aa12.46□□□□□ -0.42
CYLD-210ENST00000566206 WDR97A6NE52 1622 aa12.45□□□□□ -0.42
CYLD-210ENST00000566206 IFT140Q96RY7 1462 aa12.43□□□□□ -0.42
CYLD-210ENST00000566206 DNMBPQ6XZF7 1577 aa12.39□□□□□ -0.43
CYLD-210ENST00000566206 TOPBP1Q92547 1522 aa12.35□□□□□ -0.43
CYLD-210ENST00000566206 TARBP1Q13395 1621 aaKnown RBP12.34□□□□□ -0.43
CYLD-210ENST00000566206 CCDC88BA6NC98 1476 aa12.34□□□□□ -0.43
CYLD-210ENST00000566206 EIF4G3O43432 1585 aaKnown RBP12.34□□□□□ -0.43
CYLD-210ENST00000566206 RIMBP3CA6NJZ7 1639 aa12.33□□□□□ -0.44
CYLD-210ENST00000566206 RIMBP3BA6NNM3 1639 aa12.33□□□□□ -0.44
CYLD-210ENST00000566206 RIMBP3Q9UFD9 1639 aa12.33□□□□□ -0.44
CYLD-210ENST00000566206 OSCARQ8IYS5 282 aa12.3□□□□□ -0.44
CYLD-210ENST00000566206 CHD1O14646 1710 aa12.26□□□□□ -0.45
CYLD-210ENST00000566206 ARHGEF11O15085 1522 aa12.25□□□□□ -0.45
CYLD-210ENST00000566206 ZNF608Q9ULD9 1512 aaPredicted RBP12.24□□□□□ -0.45
CYLD-210ENST00000566206 POLA1P09884 1462 aaPredicted RBP12.2□□□□□ -0.46
CYLD-210ENST00000566206 CLASP1Q7Z460 1538 aa12.19□□□□□ -0.46
CYLD-210ENST00000566206 MAGI1Q96QZ7 1491 aaPredicted RBP12.16□□□□□ -0.46
CYLD-210ENST00000566206 TRIM41Q8WV44 630 aa12.14□□□□□ -0.47
CYLD-210ENST00000566206 SYNJ1O43426 1573 aa12.13□□□□□ -0.47
CYLD-210ENST00000566206 PBRM1Q86U86 1689 aa12.13□□□□□ -0.47
CYLD-210ENST00000566206 ABCA5Q8WWZ7 1642 aa12.11□□□□□ -0.47
CYLD-210ENST00000566206 ARAP1Q96P48 1450 aa12.1□□□□□ -0.47
CYLD-210ENST00000566206 CUX1P39880 1505 aa12.09□□□□□ -0.47
CYLD-210ENST00000566206 FGD5Q6ZNL6 1462 aa12.08□□□□□ -0.48
CYLD-210ENST00000566206 GRIN2BQ13224 1484 aa12.08□□□□□ -0.48
CYLD-210ENST00000566206 SYNJ2O15056 1496 aa12.07□□□□□ -0.48
CYLD-210ENST00000566206 AQRO60306 1485 aaKnown RBP eCLIP12.07□□□□□ -0.48
CYLD-210ENST00000566206 SOGA1O94964 1423 aa12.06□□□□□ -0.48
CYLD-210ENST00000566206 ABCA10Q8WWZ4 1543 aa12.06□□□□□ -0.48
CYLD-210ENST00000566206 SNAPC4Q5SXM2 1469 aa12.05□□□□□ -0.48
CYLD-210ENST00000566206 BIVM-ERCC5R4GMW8 1640 aa12.05□□□□□ -0.48
CYLD-210ENST00000566206 RAD54L2Q9Y4B4 1467 aa12.02□□□□□ -0.49
CYLD-210ENST00000566206 SHROOM2Q13796 1616 aa12.01□□□□□ -0.49
CYLD-210ENST00000566206 ADAMTS12P58397 1594 aa11.99□□□□□ -0.49
CYLD-210ENST00000566206 TOP2BQ02880 1626 aa11.98□□□□□ -0.49
CYLD-210ENST00000566206 GAPVD1Q14C86 1478 aa11.97□□□□□ -0.49
CYLD-210ENST00000566206 ERICH3Q5RHP9 1530 aa11.95□□□□□ -0.5
CYLD-210ENST00000566206 NUP160Q12769 1436 aa11.94□□□□□ -0.5
CYLD-210ENST00000566206 TDRD9Q8NDG6 1382 aaKnown RBP11.92□□□□□ -0.5
CYLD-210ENST00000566206 GRIN2AQ12879 1464 aa11.91□□□□□ -0.5
CYLD-210ENST00000566206 CEP170Q5SW79 1584 aa11.89□□□□□ -0.51
CYLD-210ENST00000566206 WRNQ14191 1432 aaPredicted RBP eCLIP11.88□□□□□ -0.51
CYLD-210ENST00000566206 FHAD1B1AJZ9 1412 aa11.86□□□□□ -0.51
CYLD-210ENST00000566206 CYB5RLQ6IPT4 315 aa11.85□□□□□ -0.51
CYLD-210ENST00000566206 CHMP7Q8WUX9 453 aaPredicted RBP11.84□□□□□ -0.51
CYLD-210ENST00000566206 RUSC2Q8N2Y8 1516 aa11.83□□□□□ -0.52
CYLD-210ENST00000566206 KIF13AQ9H1H9 1805 aa11.81□□□□□ -0.52
CYLD-210ENST00000566206 CUL7Q14999 1698 aa11.8□□□□□ -0.52
CYLD-210ENST00000566206 MAPKBP1O60336 1514 aa11.79□□□□□ -0.52
CYLD-210ENST00000566206 FBLN2P98095 1184 aa11.77□□□□□ -0.52
CYLD-210ENST00000566206 ERCC6L2Q5T890 1561 aa11.77□□□□□ -0.53
CYLD-210ENST00000566206 DIP2BQ9P265 1576 aa11.69□□□□□ -0.54
CYLD-210ENST00000566206 TRHP20396 242 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms