RNA–Protein interactions for RNA: ENST00000566197.1

BBS4-209, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-209ENST00000566197 NISCHQ9Y2I1 1504 aa20.32■□□□□ 0.84
BBS4-209ENST00000566197 CCDC180Q9P1Z9 1646 aa18.24■□□□□ 0.51
BBS4-209ENST00000566197 ABCC9O60706 1549 aa17.86■□□□□ 0.45
BBS4-209ENST00000566197 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
BBS4-209ENST00000566197 RB1CC1Q8TDY2 1594 aa17.19■□□□□ 0.34
BBS4-209ENST00000566197 NACADO15069 1562 aa17.12■□□□□ 0.33
BBS4-209ENST00000566197 MYO15BQ96JP2 1530 aa16.96■□□□□ 0.3
BBS4-209ENST00000566197 DCAF8L2P0C7V8 631 aa16.95■□□□□ 0.3
BBS4-209ENST00000566197 DNAJC5Q9H3Z4 198 aa16.95■□□□□ 0.3
BBS4-209ENST00000566197 UNC13AQ9UPW8 1703 aa16.91■□□□□ 0.3
BBS4-209ENST00000566197 ZCCHC6Q5VYS8 1495 aaKnown RBP16.9■□□□□ 0.3
BBS4-209ENST00000566197 DCAF1Q9Y4B6 1507 aa16.83■□□□□ 0.28
BBS4-209ENST00000566197 BICRAQ9NZM4 1560 aa16.66■□□□□ 0.26
BBS4-209ENST00000566197 PABPN1Q86U42 306 aaKnown RBP eCLIP16.6■□□□□ 0.25
BBS4-209ENST00000566197 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
BBS4-209ENST00000566197 SHROOM4Q9ULL8 1493 aa16.48■□□□□ 0.23
BBS4-209ENST00000566197 EIF4G1Q04637 1599 aaKnown RBP16.22■□□□□ 0.19
BBS4-209ENST00000566197 CC2D2AQ9P2K1 1620 aa16.21■□□□□ 0.19
BBS4-209ENST00000566197 CECR2Q9BXF3 1484 aa16.1■□□□□ 0.17
BBS4-209ENST00000566197 SMARCA4P51532 1647 aa15.85■□□□□ 0.13
BBS4-209ENST00000566197 CUX2O14529 1486 aa15.78■□□□□ 0.12
BBS4-209ENST00000566197 BAZ1AQ9NRL2 1556 aaPredicted RBP15.78■□□□□ 0.12
BBS4-209ENST00000566197 SMARCA2P51531 1590 aa15.76■□□□□ 0.11
BBS4-209ENST00000566197 NCAPD3P42695 1498 aa15.74■□□□□ 0.11
BBS4-209ENST00000566197 TRIM41Q8WV44 630 aa15.74■□□□□ 0.11
BBS4-209ENST00000566197 ATAD2BQ9ULI0 1458 aa15.73■□□□□ 0.11
BBS4-209ENST00000566197 HMGXB3Q12766 1538 aa15.71■□□□□ 0.11
BBS4-209ENST00000566197 PEG3Q9GZU2 1588 aa15.68■□□□□ 0.1
BBS4-209ENST00000566197 MROH2BQ7Z745 1585 aa15.64■□□□□ 0.09
BBS4-209ENST00000566197 BAZ1BQ9UIG0 1483 aaKnown RBP15.61■□□□□ 0.09
BBS4-209ENST00000566197 WIZO95785 1651 aa15.52■□□□□ 0.08
BBS4-209ENST00000566197 LAMC3Q9Y6N6 1575 aa15.42■□□□□ 0.06
BBS4-209ENST00000566197 ERCC6Q03468 1493 aa15.42■□□□□ 0.06
BBS4-209ENST00000566197 NESP48681 1621 aa15.41■□□□□ 0.06
BBS4-209ENST00000566197 RSF1Q96T23 1441 aaPredicted RBP15.38■□□□□ 0.05
BBS4-209ENST00000566197 KIF21AQ7Z4S6 1674 aa15.35■□□□□ 0.05
BBS4-209ENST00000566197 TOP2AP11388 1531 aaKnown RBP15.33■□□□□ 0.05
BBS4-209ENST00000566197 THOC2Q8NI27 1593 aaKnown RBP15.29■□□□□ 0.04
BBS4-209ENST00000566197 PDS5BQ9NTI5 1447 aa15.26■□□□□ 0.03
BBS4-209ENST00000566197 CADPSQ9ULU8 1353 aa15.25■□□□□ 0.03
BBS4-209ENST00000566197 PRDM2Q13029 1718 aa15.23■□□□□ 0.03
BBS4-209ENST00000566197 CFTRP13569 1480 aa15.15■□□□□ 0.02
BBS4-209ENST00000566197 AEBP2Q6ZN18 517 aaPredicted RBP15.15■□□□□ 0.02
BBS4-209ENST00000566197 MRC2Q9UBG0 1479 aa15.13■□□□□ 0.01
BBS4-209ENST00000566197 CEP164Q9UPV0 1460 aa15.13■□□□□ 0.01
BBS4-209ENST00000566197 CCDC88BA6NC98 1476 aa15.11■□□□□ 0.01
BBS4-209ENST00000566197 FANCD2Q9BXW9 1451 aa15.11■□□□□ 0.01
BBS4-209ENST00000566197 WDR62O43379 1518 aa15.1■□□□□ 0.01
BBS4-209ENST00000566197 URB2Q14146 1524 aaKnown RBP14.97□□□□□ -0.01
BBS4-209ENST00000566197 ABCC8Q09428 1581 aa14.87□□□□□ -0.03
BBS4-209ENST00000566197 DNMBPQ6XZF7 1577 aa14.87□□□□□ -0.03
BBS4-209ENST00000566197 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
BBS4-209ENST00000566197 SUPT5HO00267 1087 aaKnown RBP14.84□□□□□ -0.03
BBS4-209ENST00000566197 RIMBP3CA6NJZ7 1639 aa14.84□□□□□ -0.03
BBS4-209ENST00000566197 RIMBP3BA6NNM3 1639 aa14.84□□□□□ -0.03
BBS4-209ENST00000566197 RIMBP3Q9UFD9 1639 aa14.84□□□□□ -0.03
BBS4-209ENST00000566197 OSCARQ8IYS5 282 aa14.82□□□□□ -0.04
BBS4-209ENST00000566197 IFT140Q96RY7 1462 aa14.8□□□□□ -0.04
BBS4-209ENST00000566197 TARBP1Q13395 1621 aaKnown RBP14.76□□□□□ -0.05
BBS4-209ENST00000566197 EIF4G3O43432 1585 aaKnown RBP14.74□□□□□ -0.05
BBS4-209ENST00000566197 TRHP20396 242 aaPredicted RBP14.74□□□□□ -0.05
BBS4-209ENST00000566197 ZNF608Q9ULD9 1512 aaPredicted RBP14.72□□□□□ -0.05
BBS4-209ENST00000566197 POLA1P09884 1462 aaPredicted RBP14.72□□□□□ -0.05
BBS4-209ENST00000566197 ILDR1Q86SU0 546 aaPredicted RBP14.7□□□□□ -0.06
BBS4-209ENST00000566197 CUX1P39880 1505 aa14.7□□□□□ -0.06
BBS4-209ENST00000566197 FGD5Q6ZNL6 1462 aa14.67□□□□□ -0.06
BBS4-209ENST00000566197 WDR97A6NE52 1622 aa14.66□□□□□ -0.06
BBS4-209ENST00000566197 CHD1O14646 1710 aa14.64□□□□□ -0.07
BBS4-209ENST00000566197 RAD54L2Q9Y4B4 1467 aa14.63□□□□□ -0.07
BBS4-209ENST00000566197 ARHGEF11O15085 1522 aa14.63□□□□□ -0.07
BBS4-209ENST00000566197 SOGA1O94964 1423 aa14.63□□□□□ -0.07
BBS4-209ENST00000566197 BIVM-ERCC5R4GMW8 1640 aa14.61□□□□□ -0.07
BBS4-209ENST00000566197 AQRO60306 1485 aaKnown RBP eCLIP14.61□□□□□ -0.072e-7■■■■■ 35.1
BBS4-209ENST00000566197 PBRM1Q86U86 1689 aa14.58□□□□□ -0.07
BBS4-209ENST00000566197 TOP2BQ02880 1626 aa14.57□□□□□ -0.08
BBS4-209ENST00000566197 TDRD9Q8NDG6 1382 aaKnown RBP14.54□□□□□ -0.08
BBS4-209ENST00000566197 SYNJ1O43426 1573 aa14.54□□□□□ -0.08
BBS4-209ENST00000566197 ABCA5Q8WWZ7 1642 aa14.53□□□□□ -0.08
BBS4-209ENST00000566197 ABCA10Q8WWZ4 1543 aa14.52□□□□□ -0.08
BBS4-209ENST00000566197 WRNQ14191 1432 aaPredicted RBP eCLIP14.52□□□□□ -0.08
BBS4-209ENST00000566197 CYB5RLQ6IPT4 315 aa14.52□□□□□ -0.09
BBS4-209ENST00000566197 GRIN2BQ13224 1484 aa14.5□□□□□ -0.09
BBS4-209ENST00000566197 SNAPC4Q5SXM2 1469 aa14.5□□□□□ -0.09
BBS4-209ENST00000566197 MAGI1Q96QZ7 1491 aaPredicted RBP14.5□□□□□ -0.09
BBS4-209ENST00000566197 GAPVD1Q14C86 1478 aa14.49□□□□□ -0.09
BBS4-209ENST00000566197 FBLN2P98095 1184 aa14.44□□□□□ -0.1
BBS4-209ENST00000566197 SYNJ2O15056 1496 aa14.43□□□□□ -0.1
BBS4-209ENST00000566197 CLASP1Q7Z460 1538 aa14.4□□□□□ -0.1
BBS4-209ENST00000566197 ADAMTS12P58397 1594 aa14.39□□□□□ -0.11
BBS4-209ENST00000566197 CHMP7Q8WUX9 453 aaPredicted RBP14.39□□□□□ -0.11
BBS4-209ENST00000566197 ARAP1Q96P48 1450 aa14.38□□□□□ -0.11
BBS4-209ENST00000566197 ERICH3Q5RHP9 1530 aa14.37□□□□□ -0.11
BBS4-209ENST00000566197 GRIN2AQ12879 1464 aa14.32□□□□□ -0.12
BBS4-209ENST00000566197 FHAD1B1AJZ9 1412 aa14.31□□□□□ -0.12
BBS4-209ENST00000566197 CEP170Q5SW79 1584 aa14.28□□□□□ -0.12
BBS4-209ENST00000566197 CUL7Q14999 1698 aa14.26□□□□□ -0.13
BBS4-209ENST00000566197 NUP160Q12769 1436 aa14.25□□□□□ -0.13
BBS4-209ENST00000566197 KIF27Q86VH2 1401 aa14.24□□□□□ -0.13
BBS4-209ENST00000566197 SHROOM2Q13796 1616 aa14.23□□□□□ -0.13
BBS4-209ENST00000566197 RUSC2Q8N2Y8 1516 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms